hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-15245525/chunk_1/iprscan-20080501-15245525.nocrc
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Query sequence: KIAA0030
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00350                                                1125.1          0   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00350    1/1     300   813 ..     1   591 []  1125.1        0

Alignments of top-scoring domains:
SM00350: domain 1 of 1, from 300 to 813: score 1125.1, E = 0
                   *->kplsiReLradhlgkLVrvsGiVTRtSeVrPklkrasftCekCgatl
                       ++++R+Lr+ hl++L+r+sG+VT++++V+P+l++++++C+kC+++l
    KIAA0030   300    LVEELRSLRQLHLNQLIRTSGVVTSCTGVLPQLSMVKYNCNKCNFVL 346  

                   rpeiqdYsgreteptvCppesCqsptsdgGkkkCendPfslnheraSkFi
                   +p++q+ +++e++p++Cp+  Cqs ++           f++n+e+ + ++
    KIAA0030   347 GPFCQS-QNQEVKPGSCPE--CQSAGP-----------FEVNMEE-TIYQ 381  

                   DfQkiklQEsPeeVPaGqlPRsvdvildgdLVDkvkPGDrVevTGIyrnv
                   ++Q+i++QEsP++V aG+lPRs+d il++dLVD++kPGD++e TGIy+n+
    KIAA0030   382 NYQRIRIQESPGKVAAGRLPRSKDAILLADLVDSCKPGDEIELTGIYHNN 431  

                   PdrtgfklntakglpkgdnRGivfaTyieanhVrkldikrsfeacsiieg
                      ++++lnta+g+p       vfaT+i+anhV k+d+            
    KIAA0030   432 ---YDGSLNTANGFP-------VFATVILANHVAKKDN------------ 459  

                   dasqeeeeqDekdevsslsdeeeeeirklskdSpdIyekLskSlAPSIYG
                              k++v++l+de++++i  lskd ++I ek+++S+APSIYG
    KIAA0030   460 -----------KVAVGELTDEDVKMITSLSKD-QQIGEKIFASIAPSIYG 497  

                   hedIKKAILLlLfGGveKnlpdgmikiRGDINiLLlGDPGTAKSQlLKYV
                   hedIK++++L+LfGG++Kn+++++ k+RGDIN+LL+GDPGTAKSQ+LKY+
    KIAA0030   498 HEDIKRGLALALFGGEPKNPGGKH-KVRGDINVLLCGDPGTAKSQFLKYI 546  

                   ekvAPRAVYTtGKGSSAVGLTAaVtrDpeTrEftLEgGALVLADnGVCCI
                   ekv++RA++TtG+G+SAVGLTA+V+r+p++rE+tLE+GALVLAD+GVC+I
    KIAA0030   547 EKVSSRAIFTTGQGASAVGLTAYVQRHPVSREWTLEAGALVLADRGVCLI 596  

                   DEFDKMddsDRtAIHEaMEQQTISIAKAGItTtLNARcSvLAAANPigGR
                   DEFDKM+d+DRt+IHEaMEQQ+ISI+KAGI+T+L+ARc+v+AAANPigGR
    KIAA0030   597 DEFDKMNDQDRTSIHEAMEQQSISISKAGIVTSLQARCTVIAAANPIGGR 646  

                   YdpkltpaeNIdLpapiLSRFDLlFvVlDevDeerDreLAkHVvdlHrrs
                   Ydp+lt++eN+dL++pi+SRFD+l+vV+D+vD+++D++LA++Vv +H+r+
    KIAA0030   647 YDPSLTFSENVDLTEPIISRFDILCVVRDTVDPVQDEMLARFVVGSHVRH 696  

                   hPgedegeaLplGeadieetedeevsAae.geedqEqiaekhdnLlqvke
                   hP+++e+          e +++   sAae++     ++++++     v++
    KIAA0030   697 HPSNKEE----------EGLANG--SAAEpA-----MPNTYG-----VEP 724  

                   isiefLrkYIaYARekikPkLseeaaeklvkaYvdlRkedsqseaDskrs
                   +++e+L+kYI YA+e+++PkL++++++k++k+Y+dlRke+++++      
    KIAA0030   725 LPQEVLKKYIIYAKERVHPKLNQMDQDKVAKMYSDLRKESMATG------ 768  

                   SiPITvRqLESiIRLsEAlAKlrLsdvVeeaDVeeAirLlreSii<-*
                   SiPITvR++ES+IR++EA+A+ +L+d V e+DV++Air++ eS+i   
    KIAA0030   769 SIPITVRHIESMIRMAEAHARIHLRDYVIEDDVNMAIRVMLESFI    813  

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