hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-15230964/chunk_1/iprscan-20080501-15230964.nocrc
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Query sequence: KIAA0029
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00393                                                  89.1    5.3e-22   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00393    1/1     110   187 ..     1    83 []    89.1  5.3e-22

Alignments of top-scoring domains:
SM00393: domain 1 of 1, from 110 to 187: score 89.1, E = 5.3e-22
                   *->adflpllldiesyrprrreelielaleiakffvkstkesvelpPsMn
                      +d++ +l+++++++pr+r++l++l++ei++f++++++ ++++pP M+
    KIAA0029   110    IDLHEFLVNTLKNNPRDRMMLLKLEQEILDFIGNNESPRKKFPP-MT 155  

                   syeRkivHelaekygLeSeSeGegpkeNRrvvvskk<-*
                   sy+R++ H++a ++gL +++ ++g    ++v+v k+   
    KIAA0029   156 SYHRMLLHRVAAYFGLDHNVDQSG----KSVIVNKT    187  

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