hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-15180453/chunk_1/iprscan-20080501-15180453.nocrc
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Query sequence: KIAA0026
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF05712.4.fs MRG                                            338.7   5.5e-111   1
PF05712.4.ls MRG                                            322.7    6.2e-94   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF05712.4.ls   1/1      15   276 ..     1   542 []   322.7  6.2e-94
PF05712.4.fs   1/1      22   276 ..    39   542 .]   338.7 5.5e-111

Alignments of top-scoring domains:
PF05712.4.ls: domain 1 of 1, from 15 to 276: score 322.7, E = 6.2e-94
                   *->ssWDEwVpVGEEedRiLKytEENlklQreLakkAaarlqkttsklke
                             +                      a+   +  +k+t     
    KIAA0026    15    -------S----------------------AE--EENFKKPTRS-NM 29   

                   arkkkrlslPgvdsslkGkrseesesndskspttssspktkseegGHVed
                   +r+k+r++++g       k + + ++++ + p ++ + +     g   ++
    KIAA0026    30 QRSKMRGASSG-------KKTAGPQQKNLE-PALPGRWG-----G---RS 63   

                   ptadkddtttvakkkkkkkpengnddstspftpDFGsfkkldeAlAktrk
                    +  +  + +++ k+k+k+p+ng+++sts                    +
    KIAA0026    64 AENPPSGSVRKTRKNKQKTPGNGDGGSTS--------------------E 93   

                   peePtakKrkrrSedrsslrssDaaGNRsRDNSsGkkKekdkSGDkrldG
                    ++P++kKr                                         
    KIAA0026    94 APQPPRKKR----------------------------------------- 102  

                   eRrrvaekflrvtpkDvertdssplvEeednfaaempapkikieIPeeLK
                                    +r d  p+vE+e++f ++m   ++k++IPeeLK
    KIAA0026   103 -----------------ARAD--PTVESEEAFKNRM---EVKVKIPEELK 130  

                   klLvDDWeyvtrnkklvaLPakvtVdtILedYlkhiAVelaisikeDSSR
                   ++Lv DW++vtr+k+l+ LPak++Vd+ILe Y++                
    KIAA0026   131 PWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANC--------------- 165  

                   aRnthsRparkmsreelnseskvdalkEvvaGLriYFdvcLGnmLLYkfE
                             k+s   +n+++k++a++EvvaG+++YF+v+LG++LLYkfE
    KIAA0026   166 ----------KKS--QGNVDNKEYAVNEVVAGIKEYFNVMLGTQLLYKFE 203  

                   RaQYkEllkkkFFLtDdNmkncslllNkSyEyinPSgdeeLisLrgstpd
                   R+QY+E+l+                                      +pd
    KIAA0026   204 RPQYAEILLA-------------------------------------HPD 216  

                   TAnCDRLsesngspgpllgqqeyeaqLqKcllyiEKntPvHarsssaipy
                   +                                                 
    KIAA0026   217 A------------------------------------------------- 217  

                   TaayklpvemrGFlnEtlsWkLlsdnsPpkdqkPlepSqiYGAeHLLRLf
                                                      ++Sq+YGA+HLLRLf
    KIAA0026   218 -----------------------------------PMSQVYGAPHLLRLF 232  

                   VkLPelLsytnmdeqslerLlkhlddFLkfLakNhdeyFsGesdY<-*
                   V+++++L+yt++de+sl++Ll +l+dFLk+LakN++  F  +sdY   
    KIAA0026   233 VRIGAMLAYTPLDEKSLALLLGYLHDFLKYLAKNSASLFT-ASDY    276  

PF05712.4.fs: domain 1 of 1, from 22 to 276: score 338.7, E = 5.5e-111
                   *->qkttsklkearkkkrlslPgvdsslkGkrseesesndskspttsssp
                      +k+t     +r+k+r++++g       k + + ++++ + p ++ + 
    KIAA0026    22    KKPTRS-NMQRSKMRGASSG-------KKTAGPQQKNLE-PALPGRW 59   

                   ktkseegGHVedptadkddtttvakkkkkkkpengnddstspftpDFGsf
                   +     g   ++ +  +  + +++ k+k+k+p+ng+++sts         
    KIAA0026    60 G-----G---RSAENPPSGSVRKTRKNKQKTPGNGDGGSTS--------- 92   

                   kkldeAlAktrkpeePtakKrkrrSedrsslrssDaaGNRsRDNSsGkkK
                              + ++P++kKr                             
    KIAA0026    93 -----------EAPQPPRKKR----------------------------- 102  

                   ekdkSGDkrldGeRrrvaekflrvtpkDvertdssplvEeednfaaempa
                                                +r d  p+vE+e++f ++m  
    KIAA0026   103 -----------------------------ARAD--PTVESEEAFKNRM-- 119  

                   pkikieIPeeLKklLvDDWeyvtrnkklvaLPakvtVdtILedYlkhiAV
                    ++k++IPeeLK++Lv DW++vtr+k+l+ LPak++Vd+ILe Y++    
    KIAA0026   120 -EVKVKIPEELKPWLVEDWDLVTRQKQLFQLPAKKNVDAILEEYANC--- 165  

                   elaisikeDSSRaRnthsRparkmsreelnseskvdalkEvvaGLriYFd
                                         k+s   +n+++k++a++EvvaG+++YF+
    KIAA0026   166 ----------------------KKS--QGNVDNKEYAVNEVVAGIKEYFN 191  

                   vcLGnmLLYkfERaQYkEllkkkFFLtDdNmkncslllNkSyEyinPSgd
                   v+LG++LLYkfER+QY+E+l+                             
    KIAA0026   192 VMLGTQLLYKFERPQYAEILLA---------------------------- 213  

                   eeLisLrgstpdTAnCDRLsesngspgpllgqqeyeaqLqKcllyiEKnt
                            +pd+                                     
    KIAA0026   214 ---------HPDA------------------------------------- 217  

                   PvHarsssaipyTaayklpvemrGFlnEtlsWkLlsdnsPpkdqkPlepS
                                                                  ++S
    KIAA0026   218 -----------------------------------------------PMS 220  

                   qiYGAeHLLRLfVkLPelLsytnmdeqslerLlkhlddFLkfLakNhdey
                   q+YGA+HLLRLfV+++++L+yt++de+sl++Ll +l+dFLk+LakN++  
    KIAA0026   221 QVYGAPHLLRLFVRIGAMLAYTPLDEKSLALLLGYLHDFLKYLAKNSASL 270  

                   FsGesdY<-*
                   F  +sdY   
    KIAA0026   271 FT-ASDY    276  

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