hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-15092787/chunk_1/iprscan-20080501-15092787.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: KIAA0022
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00034                                                  70.6    1.9e-16   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00034    1/1      23   153 ..     1   141 []    70.6  1.9e-16

Alignments of top-scoring domains:
SM00034: domain 1 of 1, from 23 to 153: score 70.6, E = 1.9e-16
                   *->CpstpsgWvsyprpnkyfggkCYkfst.......WadAqafCqslgp
                      Cp   s W+++       +++CY f  +  + ++ +d ++ C+++g 
    KIAA0022    23    CP--SSTWIQF-------QDSCYIFLQeaikvesIEDVRNQCTDHG- 59   

                   rtgrvkgghLasIhseeEndFltsl..........yWIGLs.....g.wq
                          ++  sIh+eeEn+F++   +++ ++++++ +G+  ++++ +++
    KIAA0022    60 -------ADMISIHNEEENAFILDTlkkqwkgpddILLGMFydtddAsFK 102  

                   WsDGsgviplaltpvsytnWapgePnnePnnkfrhgnggngdCvvls...
                   W D+s       + + +++W +   +           +  ++C++l+ ++
    KIAA0022   103 WFDNS-------NMT-FDKWTDQDDDE----------DLVDTCAFLHikt 134  

                   ..WndvsCtskdpadklpfiCk<-*
                   + W+  +C+ +   +  + +Ck   
    KIAA0022   135 geWKKGNCEVS---SVEGTLCK    153  

//