hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080501/iprscan-20080501-14574574/chunk_1/iprscan-20080501-14574574.nocrc
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Query sequence: KIAA0015
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00332                                                 302.7    2.7e-86   1
SM00331                                                  28.8    0.00013   1

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00332      1/1     170   437 ..     1   338 []   302.7  2.7e-86
SM00331      1/1     197   439 ..     1   250 []    28.8  0.00013

Alignments of top-scoring domains:
SM00332: domain 1 of 1, from 170 to 437: score 302.7, E = 2.7e-86
                   *->es.sgknlglryglgessmqgwrkpmEDahvirp.............
                      ++ +  +++ ++ ++++++ + r++mED+hv  p+ ++  + +++ +
    KIAA0015   170    VPlAARASQRQWLVSIHAIRNTRRKMEDRHVSLPsfnqlfglsdpvn 216  

                   ..ffgVfDGHGGseaakflsknlheilaeelsfdkdeslkeneelkdepe
                   + +f+VfDGHGG +aa++++ + h + a++++ ++d              
    KIAA0015   217 raYFAVFDGHGGVDAARYAAVHVHTNAARQPELPTD-------------- 252  

                   sserlngdksledveealrkaFlrtdeei............sTAvvalir
                                +e alr+aF+rtd  + ++ ++++ ++++T v+ali 
    KIAA0015   253 -------------PEGALREAFRRTDQMFlrkakrerlqsgTTGVCALIA 289  

                   gnklyvANvGDSRavLcrngkdswegvrtysavqLteDHkpsnedEreRI
                   g +l+vA++GDS+++L ++g+          +v L e H+p+++dE++RI
    KIAA0015   290 GATLHVAWLGDSQVILVQQGQ----------VVKLMEPHRPERQDEKARI 329  

                   eaaGGevepidrefvsngggvvwRvnGvvisLavsRalGDfelKkkedel
                   ea+GG        fvs  ++  wRvnG+   LavsRa+GD++ K      
    KIAA0015   330 EALGG--------FVSHMDC--WRVNGT---LAVSRAIGDVFQK------ 360  

                   ieenrlyekfdprlpgkepyvsaePevtvvelsqtlvptedddfliLASD
                                     pyvs e +  ++ l      t + d l+LA+D
    KIAA0015   361 ------------------PYVSGEADAASRAL------TGSEDYLLLACD 386  

                   GlWDvlsnqeavdivrkhlrkgddkevksaaqelaradslrskkhndpke
                   G +Dv+++qe+v +v++hl+                      ++ ++  +
    KIAA0015   387 GFFDVVPHQEVVGLVQSHLT----------------------RQQGSGLR 414  

                   aaklLvdlAl....kDNiTvvvv<-*
                   +a++Lv +A++++++DNiTv+vv   
    KIAA0015   415 VAEELVAAARergsHDNITVMVV    437  

SM00331: domain 1 of 1, from 197 to 439: score 28.8, E = 0.00013
                   *->vdggliaayyeeatqvgGDyydvialpegkdrlliaiaDvmGwAkGl
                      ++++  + +++          +   +p    r  +a+ D++G   G+
    KIAA0015   197    DRHVSLPSFNQ---------LFGLSDPVN--RAYFAVFDGHG---GV 229  

                   aAalamsm.lrsalrtllse......slsqilerlnraiyen.neeedgm
                    Aa++++ ++++    +  +++++++ l ++ +r+++ + ++   e    
    KIAA0015   230 DAARYAAVhVHTNAARQPELptdpegALREAFRRTDQMFLRKaKRERLQS 279  

                   faTlflalyvldfatgtlsyanaGhsppyllraqdgglveilsdtslvqe
                   ++T ++al+    a++tl++a  G+s + l+   +g+ v   +       
    KIAA0015   280 GTTGVCALI----AGATLHVAWLGDSQVILVQ--QGQVVKLMEP------ 317  

                   lagggideedakhhprknvlgapLGlepdve...................
                             +  +++ + +  +LG ++  ++  + +++   ++  ++  
    KIAA0015   318 ---------HRPERQDEKARIEALGGFVSHMdcwrvngtlavsraigdvf 358  

                   ..........vdvrevtlepGDllllyTDGltearseqgeffgeerLeel
                   +++  +++ ++ +r +t  + D lll+ DG ++++ +q+       + +l
    KIAA0015   359 qkpyvsgeadAASRALTGSE-DYLLLACDGFFDVVPHQE-------VVGL 400  

                   lealvgsepqeiaqrilaellefaggangeDDiTvvvvkv<-*
                   + ++++   +   +  ++el + a +++ +D+iTv+vv +   
    KIAA0015   401 VQSHLTRQQGSGLR-VAEELVAAARERGSHDNITVMVVFL    439  

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