Gene/Protein Characteristic Table for FLJ00417
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Product ID ORK05198
Accession No AK122591
Clone name sj06336s1
Vector information
cDNA sequence DNA sequence (4299 bp)
Predicted protein sequence (600 aa)
Flexi ORF Clone FXC05198
Source Human spleen
Features of the cloned cDNA sequence
Description

Length: 4299 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq No warning Warning
Features of the protein sequence
Description

Length: 600 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
BAC56932 1.2e-192 99.7 FLJ00417 protei...
Homo sapiens
CAX30815 7.5e-158 99.8 phospholipase C...
Homo sapiens
BAB84975 1.5e-135 93.9 FLJ00222 protei...
Homo sapiens
BAC56930 3.8e-135 93.7 FLJ00414 protei...
Homo sapiens
EAW56101 5.4e-135 93.7 phospholipase C...
Homo sapiens
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against other entries from Kazusa human cDNA project (FASTA output, Multiple alignment)
Entry Exp ID% HUGE_ID
AK074149 4.4e-75 93.9 FLJ00222
AK122589 8.1e-75 93.7 FLJ00414
AB007919 2.4e-63 92.8 KIAA0450
AB028992 3.2e-12 53.6 KIAA1069
AB029015 8.5e-05 34.6 KIAA1092
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
FPrintScan IPR000008 170 182 PR00360 C2 calcium-dependent membrane targeting
IPR000008 200 213 PR00360 C2 calcium-dependent membrane targeting
IPR000008 222 230 PR00360 C2 calcium-dependent membrane targeting
HMMPfam IPR000008 172 241 PF00168 C2 calcium-dependent membrane targeting
HMMSmart IPR000008 146 256 SM00239 C2 calcium-dependent membrane targeting
ProfileScan IPR000008 175 241 PS50004 C2 calcium-dependent membrane targeting
Experimental conditions
Primer_f
Primer_r
PCR conditions test
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