FLJ00166

Product ID	ORK01036
Accession No	AK074095
Clone name	sh07301
Vector information	The cDNA fragment was inserted at the SalI-NotI site of the ... The cDNA fragment was inserted at the SalI-NotI site of the pBluescript II SK(+) vector (GenBank Accession No. X52328). The 5' end of the cDNA was repaired and ligated with the SalI adapter (5'TCGACCCACGCGTCCG3') and inserted at the SalI site of the vector. The 3'end of the cDNA was inserted at the NotI site of the vector.
cDNA sequence	DNA sequence (5692 bp) Predicted protein sequence (454 aa)
HaloTag ORF Clone	FHC01036
Flexi ORF Clone	FXC01036
Source	Human spleen

	N-terminal truncation	Coding interruption
cloned DNA seq	Warning	Warning

Length: 454 aa

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	Exp	ID%	Protein	Source
BAB84921	1.5e-185	100.0	FLJ00166 protei...	Homo sapiens
CAD89930	1.5e-185	100.0	hypothetical pr...	Homo sapiens
XP_001099584	2.6e-182	98.0	similar to tetr...	Macaca mulatta
EAW78377	4.6e-179	100.0	tetratricopepti...	Homo sapiens
XP_001153924	9e-179	98.9	similar to FLJ0...	Pan troglodytes

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other entries from Kazusa human cDNA project (FASTA output, Multiple alignment)

Entry	Exp	ID%	HUGE_ID
AB075860	4.5e-119	100.0	KIAA1980

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method	interpro_ID	From	To	Entry	Definition
HMMPfam	IPR001440	322	355	PF00515	TPR repeat
	IPR001440	356	389	PF00515	TPR repeat
	IPR001440	397	430	PF00515	TPR repeat
HMMSmart	IPR001440	322	355	SM00028	TPR repeat
	IPR001440	356	389	SM00028	TPR repeat
	IPR001440	397	430	SM00028	TPR repeat
ProfileScan	IPR003029	141	223	PS50126	RNA binding S1
	IPR001440	322	430	PS50293	TPR repeat
	IPR001440	322	355	PS50005	TPR repeat
	IPR001440	356	389	PS50005	TPR repeat

Primer_f
Primer_r
PCR conditions	test