Gene/Protein Characteristic Table for KIAA0060
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Product ID ORK00008
Accession No D31766
Description glucosamine-6-phosphate deaminase 1
Clone name ha01541
Vector information
The cDNA fragment was inserted at the EcoRV-NotI site of the ...
cDNA sequence DNA sequence (2613 bp)
Predicted protein sequence (317 aa)
Flexi ORF Clone FXC00008
Source Myeloblast cell line (KG-1)
Rouge ID mKIAA0060 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence

Length: 2613 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq No warning No warning
Integrity of 3' end
Length of 3'UTR 1342 bp
Genome contig ID gi51511721r_141260427
PolyA signal sequence
Flanking genome sequence
(100000 - 99951)

Ensembl ContigView (Add our DAS server as a DAS source)

Chr f/r start end exon identity class
Ensembl gnome browser 5 r 141360427 141372722 8 98.8 Perfect prediction
Features of the protein sequence

Length: 317 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
P46926 3.3e-125 100.0 Glucosamine-6-p...
Homo sapiens
BAF83375 8.6e-125 99.7 unnamed protein...
Homo sapiens
Q5R8T8 8.6e-125 99.7 Glucosamine-6-p...
Pongo abelii
A4FV08 2.9e-123 97.9 Glucosamine-6-p...
Bos taurus
XP_001504008 1e-122 97.9 similar to gluc...
Equus caballus
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR006148 43 278 PF01182 Glucosamine/galactosamine-6-phosphate isomerase
HMMTigr IPR004547 29 287 TIGR00502 Glucosamine-6-phosphate isomerase
ScanRegExp IPR004547 153 171 PS01161 Glucosamine-6-phosphate isomerase
Expression profile

Northern blot
Experimental conditions
PCR conditions test

RH mapping information

Chromosome No. 5
Experimental conditions
Panel name Genebridge 4
PCR product length 228 bp
PCR conditions 95 °C15 sec60 °C60 sec30 cycles
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