Gene/Protein Characteristic Table for KIAA0063
Order Kazusa clone(s) from : Japan || Other countries
Product ID ORK00390
Accession No D31884
Description Josephin domain containing 1
Clone name ha01234
Vector information
The cDNA fragment was inserted at the EcoRV-NotI site of the ...
cDNA sequence DNA sequence (3168 bp)
Predicted protein sequence (211 aa)
Flexi ORF Clone FXC00390
Source Myeloblast cell line (KG-1)
Rouge ID mKIAA0063 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence

Length: 3168 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq No warning Warning
Integrity of 3' end
Length of 3'UTR 2280 bp
Genome contig ID gi89161203r_37311573
PolyA signal sequence
Flanking genome sequence
(100000 - 99951)

Ensembl ContigView (Add our DAS server as a DAS source)

Chr f/r start end exon identity class
Ensembl gnome browser 22 r 37411573 37426217 4 99.2 Perfect prediction
Features of the protein sequence

Length: 211 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
Q15040 7.5e-91 100.0 Josephin-1; Jos...
Homo sapiens
Q5BJY4 1.9e-88 97.0 Josephin-1; Jos...
Rattus norvegicus
XP_538372 1.9e-88 97.5 similar to Jose...
Canis lupus fam...
Q9DBJ6 2.2e-88 97.0 Josephin-1; Jos...
Mus musculus
XP_001501689 5.9e-88 97.0 similar to Jose...
Equus caballus
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR006155 34 208 PF02099 Machado-Joseph disease protein MJD
ProfileScan IPR006155 32 211 PS50957 Machado-Joseph disease protein MJD
Expression profile

Northern blot
Experimental conditions
PCR conditions test

RH mapping information

Chromosome No. 22
Experimental conditions
Panel name Stanford G3
PCR product length 163 bp
PCR conditions 95 °C15 sec62 °C60 sec30 cycles
Order Kazusa clone(s) from : Japan || Other countries
Back to the HUGE Protein Database homepage
Send a message to office AT