Gene/Protein Characteristic Table for KIAA0101
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Product ID ORK01958
Accession No D14657
Description KIAA0101, transcript variant 1
Clone name ha00771
Vector information
The cDNA fragment was inserted at the EcoRV-NotI site of the ...
cDNA sequence DNA sequence (836 bp)
Predicted protein sequence (130 aa)
Flexi ORF Clone FXC01958
Source Myeloblast cell line (KG-1)
Rouge ID mKIAA0101 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence
Description

Length: 836 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq No warning No warning
Integrity of 3' end
Length of 3'UTR 439 bp
Genome contig ID gi51511731r_62344843
PolyA signal sequence
(ATTAAA,-22)
+----*----+----*----+----*----+----
TAGATTTTTGCACATTAAAAAATTCAGTATTAATT
Flanking genome sequence
(100000 - 99951)
----+----*----+----*----+----*----+----*----+----*
AAACATTACTTATTCTACCCTCTTTTTTGGCAAGGAGGACAAATACGCAA

Ensembl ContigView (Add our DAS server as a DAS source)


Chr f/r start end exon identity class
Ensembl gnome browser 15 r 62444843 62460684 4 100.0 Perfect prediction
Features of the protein sequence
Description

Length: 130 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
EDL26108 4.6e-38 83.1 mCG131663, isof...
Mus musculus
Q6RIA2 6.8e-37 87.4 PCNA-associated...
Rattus norvegicus
EAW77683 1.3e-36 95.1 hCG2039386, iso...
Homo sapiens
EAW77680 4.7e-36 90.8 hCG2039386, iso...
Homo sapiens
Q9CQX4 7.4e-36 84.7 PCNA-associated...
Mus musculus
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
BlastProDom NULL 20 130 PD072652 NULL
Expression profile
Description

Northern blot
Experimental conditions
Primer_f
Primer_r
PCR conditions test

RH mapping information
Description

Chromosome No. 15
Experimental conditions
Panel name Genebridge 4
Primer_f TCAGTTCGTTCTCTCCTCTCC
Primer_r TAGTGGCAGAGGTGGAAGAAC
PCR product length 138 (0.4k) bp
PCR conditions 95 °C15 sec66 °C60 sec30 cycles
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