Gene/Protein Characteristic Table for KIAA0107
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Product ID ORK01960
Accession No D14663
Description proteasome 26S subunit, non-ATPase 6, transcript variant 2
Clone name ha00588
Vector information
The cDNA fragment was inserted at the EcoRV-NotI site of the ...
cDNA sequence DNA sequence (1308 bp)
Predicted protein sequence (397 aa)
Flexi ORF Clone FXC01960
Source Myeloblast cell line (KG-1)
Rouge ID mKIAA0107 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence

Length: 1308 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning No warning
Integrity of 3' end
Length of 3'UTR 113 bp
Genome contig ID gi89161205r_63871271
PolyA signal sequence
Flanking genome sequence
(100000 - 99951)

Ensembl ContigView (Add our DAS server as a DAS source)

Chr f/r start end exon identity class
Ensembl gnome browser 3 r 63971271 63984160 8 99.9 Perfect prediction
Features of the protein sequence

Length: 397 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
BAE87141 1.1e-158 99.7 unnamed protein...
Macaca fascicularis
Q3T0B2 2.3e-157 98.5 26S proteasome ...
Bos taurus
XP_541816 3.5e-156 97.7 similar to 26S ...
Canis lupus fam...
AAH59159 4.1e-156 97.9 Proteasome (pro...
Rattus norvegicus
BAB26823 8.5e-155 97.2 unnamed protein...
Mus musculus
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR000717 262 366 PF01399 Proteasome component region PCI
HMMSmart IPR000717 298 381 SM00088 Proteasome component region PCI
Expression profile

Northern blot
Experimental conditions
PCR conditions test

RH mapping information

Chromosome No. "4,7"
Experimental conditions
Panel name Genebridge 4
PCR product length 127 (1.7k) bp
PCR conditions 95 °C15 sec64 °C60 sec30 cycles
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