Gene/Protein Characteristic Table for FLJ00051
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Product ID ORK05050
Accession No AK024459
Clone name as00051
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (4325 bp)
Predicted protein sequence (462 aa)
Source Human spleen
Features of the cloned cDNA sequence
Description

Length: 4325 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning No warning
Features of the protein sequence
Description

Length: 462 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
BAB15749 1.1e-180 100.0 FLJ00051 protei...
Homo sapiens
CAC17542 2.3e-180 99.8 sialic acid bin...
Homo sapiens
EAX10518 6.1e-180 99.8 sialic acid bin...
Homo sapiens
BAB15752 1.6e-172 98.9 FLJ00055 protei...
Homo sapiens
AAI41885 2.4e-172 98.9 SIGLEC1 protein...
Homo sapiens
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against other entries from Kazusa human cDNA project (FASTA output, Multiple alignment)
Entry Exp ID% HUGE_ID
AK024479 2.6e-157 100.0 FLJ00073
AK024462 2.2e-150 98.9 FLJ00055
AK122586 5e-08 36.1 FLJ00411
D86983 5.5e-06 24.9 KIAA0230
AB058770 0.00016 25.5 KIAA1867
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR007110 87 139 PF00047 Immunoglobulin-like
IPR007110 173 240 PF00047 Immunoglobulin-like
HMMSmart IPR003598 2 61 SM00408 Immunoglobulin C-2 type
IPR003599 11 72 SM00409 Immunoglobulin subtype
IPR003599 79 156 SM00409 Immunoglobulin subtype
IPR003598 85 144 SM00408 Immunoglobulin C-2 type
IPR003599 165 256 SM00409 Immunoglobulin subtype
IPR003598 171 245 SM00408 Immunoglobulin C-2 type
IPR003599 263 343 SM00409 Immunoglobulin subtype
IPR003598 269 331 SM00408 Immunoglobulin C-2 type
IPR003599 349 444 SM00409 Immunoglobulin subtype
IPR003598 358 433 SM00408 Immunoglobulin C-2 type
ProfileScan IPR007110 1 72 PS50835 Immunoglobulin-like
IPR007110 72 154 PS50835 Immunoglobulin-like
IPR007110 258 339 PS50835 Immunoglobulin-like
IPR007110 349 444 PS50835 Immunoglobulin-like
Expression profile
Description

RT-PCR-ELISA
Experimental conditions
Primer_f
Primer_r
PCR conditions test
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