Gene/Protein Characteristic Table for FLJ00039
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Product ID ORK05044
Accession No AK074030
Clone name as00039
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (4616 bp)
Predicted protein sequence (1438 aa)
Source Human spleen
Features of the cloned cDNA sequence
Description

Length: 4616 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq Warning No warning
Features of the protein sequence
Description

Length: 1438 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
BAB84856 0 100.0 FLJ00039 protei...
Homo sapiens
CAE45967 0 100.0 hypothetical pr...
Homo sapiens
CAH56189 0 100.0 hypothetical pr...
Homo sapiens
Q63HN8 0 100.0 RING finger pro...
Homo sapiens
XP_511726 0 97.9 chromosome 17 o...
Pan troglodytes
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against other entries from Kazusa human cDNA project (FASTA output, Multiple alignment)
Entry Exp ID% HUGE_ID
AB046774 0 100.0 KIAA1554
AB037825 0.00082 47.6 KIAA1404
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
HMMPfam IPR001841 228 266 PF00097 Zn-finger
HMMSmart IPR001841 228 266 SM00184 Zn-finger
ProfileScan IPR001841 228 266 PS50089 Zn-finger
ScanRegExp IPR000345 756 761 PS00190 Cytochrome c heme-binding site
Experimental conditions
Primer_f
Primer_r
PCR conditions test
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