Gene/Protein Characteristic Table for KIAA1585
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Product ID ORK00870
Accession No AB046805
Description male-specific lethal 2 homolog (Drosophila), transcript variant 1
Clone name fj07340
Vector information
The cDNA fragment was inserted at the SalI-NotI site of the ...
cDNA sequence DNA sequence (4039 bp)
Predicted protein sequence (595 aa)
Flexi ORF Clone FXC00870
Source Human fetal brain
Rouge ID mKIAA1585 by Kazusa Mouse cDNA Project
Features of the cloned cDNA sequence
Description

Length: 4039 bp
Physical map
Restriction map
Prediction of protein coding region (GeneMark analysis).

N-terminal truncation Coding interruption
cloned DNA seq No warning No warning
Integrity of 3' end
Length of 3'UTR 2224 bp
Genome contig ID gi89161205r_137250450
PolyA signal sequence
(AATAAA,-24)
+----*----+----*----+----*----+----
TTAAATCTATCAATAAATGATAGTTTTCTAATTCT
Flanking genome sequence
(100000 - 99951)
----+----*----+----*----+----*----+----*----+----*
ATGTTGTAGAATACTGAAGAGTTTGGGATAGCATGCTCTGAATGGTCTGT

Ensembl ContigView (Add our DAS server as a DAS source)


Chr f/r start end exon identity class
Ensembl gnome browser 3 r 137350450 137396726 2 99.1 Perfect prediction
Features of the protein sequence
Description

Length: 595 aa
Result of homology search against nr database (FASTA output, Multiple alignment)
Entry Exp ID% Protein Source
XP_542793 0 98.8 similar to ring...
Canis lupus fam...
XP_236567 0 98.5 similar to ring...
Rattus norvegicus
Q9HCI7 0 100.0 Male-specific l...
Homo sapiens
BAF85246 0 99.7 unnamed protein...
Homo sapiens
XP_001927797 0 99.1 similar to Male...
Sus scrofa
The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of homology search against HUGE database (FASTA output, Multiple alignment)
No significant homologues
Result of motif / domain search (InterProScan and SOSUI)

Result of InterProScan

Search method interpro_ID From To Entry Definition
ProfileScan IPR001841 62 103 PS50089 Zinc finger
Expression profile
Description

RT-PCR-ELISA
Experimental conditions
Primer_f AAGGACTGACTAGGTGTAATG
Primer_r GGCGAGTAACCATCATTGAAC
PCR conditions 95 °C30 sec55 °C30 sec72 °C60 sec30 cycles

RH mapping information
Description

Chromosome No. 3
Experimental conditions
Panel name RH-map
Primer_f AAGGACTGACTAGGTGTAATG
Primer_r GGCGAGTAACCATCATTGAAC
PCR product length 194 bp
PCR conditions 95 °C15 sec62 °C60 sec30 cycles
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