Table 2B Supplement. Abundant tags (more than 50) in the nodulating root library

Tag count Tag EST Definition of the similar sequence Organism Accession E-value
2328 CATGTTCAGAAAGC GNf096c12 leghemoglobin Lotus corniculatus var. japonicus dbj|BAB18106.1| 3.00E-62
661 CATGCTGAAAAGGT GNf092e01 Leghemoglobin Lotus corniculatus var. japonicus sp|Q9FEP8|LGB_LOTJA 6.00E-44
559 CATGCGAATATATT GNf058f11 No similarily      
546 CATGAGCTATGGTT MWM200f03_f metallothionein-like protein class II Fagus sylvatica emb|CAA10232.1| 2.00E-26
450 CATGGTATGTTGTG GNf005g08 early nodulin ENOD18 Vicia faba emb|CAC18556.1| 1.00E-36
399 CATGTTGTAATCAT MWM233f05_f Asparagine synthetase glutamine-hydrolyzing sp|P49093|ASN2_LOTJA 3.00E-36
279 CATGTTTTGATGAA MR066h04_f expressed protein Arabidopsis thaliana ref|NP_564277.1| 3.00E-17
275 CATGAATGGATGTG MWM130e08_f thiamin biosynthetic enzyme Glycine max dbj|BAA88226.1| 3E-15
274 CATGTGGTTCTCGT BI417968.1 No similarily      
250 CATGTGTGTATGGT AW719605.1 SOYBN EARLY NODULIN 36B Glycine max sp|Q02919|N36B_SOYBN 1.00E-04
224 CATGATGAGCGTTA SPD080h04_f "Glyceraldehyde 3-phosphate dehydrogenase, cytosolic" Pisum sativum sp|P34922|G3PC_PEA 1E-15
223 CATGGGTTTGCCAT MWM194h12_f glutamate-rich protein Lotus corniculatus var. japonicus dbj|BAD11133.1| 6.00E-33
212 CATGAATTGTTGAG GNLf020f04 metallothionein soybean pir||JQ2128 8.00E-39
199 CATGCAGATCTTCG BI419880.1 polyubiquitin Phaseolus vulgaris gi|1684855|gb|AAB36545.1| 1.00E-75
190 CATGGCTTAAGAAA MR018b09_f putative G-box binding protein Oryza sativa gi|18644696|gb|AAL76334.1| 2.00E-23
187 CATGAGCAACGTTT GNf098b03 lectin-related polypeptide Robinia pseudoacacia dbj|BAA36416.1| 8.00E-84
182 CATGTAAATAGTGT SPD077a01_f auxin-repressed protein Robinia pseudoacacia gb|AAG33924.1| 4.00E-28
170 CATGGCTGTGGTGT MFB048e07_f ubiquitin conjugating enzyme Pisum sativum gb|AAA64427.1| 1.00E-67
156 CATGGTGAATGGAA SPD099g05_f cytosolic ascorbate peroxidase Cucumis sativus dbj|BAA13671.1| 2.00E-04
147 CATGTGCTGGCAAT SPDL081e02_f Repetitive proline-rich cell wall protein 2 precursor Glycine max sp|P13993|PRP2_SOYBN 6.00E-25
146 CATGTCTTTAGCAG GENLf091e03 leghemoglobin Lotus corniculatus var. japonicus dbj|BAB18107.1| 1.00E-61
144 CATGAGACCTGATT SPD044f05_f arabinogalactan-protein (AGP15) Arabidopsis thaliana ref|NP_196735.1| 5.00E-08
141 CATGGCCGATGTTG BG662376.1 glycine-rich RNA binding protein 1 Pelargonium x hortorum gb|AAB63581.1| 7.00E-38
133 CATGTCGTAATAAA GNf098a01 carbonic anhydrase Lotus corniculatus var. japonicus emb|CAD66064.1| 2E-10
127 CATGTGATGAGATA SPDL076h11_f CYP1 Vigna radiata dbj|BAB82452.1| 3.00E-81
124 CATGTAGGTTTCAG SPDL082b09_f proline dehydrogenase Glycine max gb|AAR86686.1| 6.00E-45
123 CATGAGTGATGTAC GENLf040f08 PR10-1 protein Medicago truncatula emb|CAA69931.1| 6.00E-24
123 CATGTTATGAACTA MPD062d11_f thiamin biosynthetic enzyme Glycine max dbj|BAA88226.1| 4E-15
116 CATGGAAATCTACC GNf050e08 phosphatidylinositol transfer-like protein IV Lotus japonicus gb|AAK63248.1|AF367434_1 5.00E-65
114 CATGGTTGGATGGA MR042d03_f putative ripening related protein Cicer arietinum emb|CAD31716.1| 2E-12
113 CATGGTGTGATCGC no match        
108 CATGCTTAGGCAAA GNf065d10 unnamed protein product Arabidopsis thaliana dbj|BAA97184.1| 3.00E-18
107 CATGCATTACTGTA MR080c09_f extensin=nodule-specific proline-rich protein "Vicia faba=broadbeans, root nodules, Peptide Partial, 116 aa" gb|AAB28462.1| 3E-12
103 CATGGAGGTATGCT BI421056.1 EARLY NODULIN 36A Glycine max sp|Q02918|N36A_SOYBN 1.00E-05
103 CATGAGGGGCAATG AW719215.1 Al-induced protein Gossypium hirsutum gb|AAQ74889.1| 8.00E-05
101 CATGTGATCTGGTG GENf045d07 plasma membrane integral protein ZmPIP2-7 Zea mays gb|AAK26763.1| 5.00E-56
101 CATGTTGTGTACCA GNf038c11 putative protein; protein id: At5g19600.1 Arabidopsis thaliana ref|NP_568377.1| 3.00E-07
100 CATGCTATTTATGT GNf026e05 No similarily      
99 CATGTGTGATTTAC MPD006h02_f aquaporin protein PIP1;1 Medicago truncatula gb|AAK66766.1| 6.00E-39
99 CATGCATTGTTACT CB827644.1 calmodulin Elaeis oleifera gb|AAK72000.1| 1.00E-35
99 CATGTGTAGCTCAG GNf095a02 No similarily      
96 CATGATGTAAGCGC SSQS102a05_f No similarily      
95 CATGGAAGGACTAC GNf008e01 elongation factor 1-alpha Pisum sativum sp|Q41011|EF1A_PEA 7.00E-27
94 CATGCTTGTCCAAA MWM071e03_f No similarily      
93 CATGATGTGAATGT SPDL078g09_f nodule-enhanced sucrose synthase Pisum sativum gb|AAC28107.1| 2.00E-57
91 CATGTCTTTTTCTT GNf042f11 Nlj21 Lotus japonicus gb|AAB69643.1| 2.00E-16
90 CATGCAGATGTGTG SPD065a06_f HMG1/2-like protein Glycine max sp|P26585|HMGL_SOYBN 1.00E-62
89 CATGCCCAAGGATA SPD001h07_f histone H3 Medicago sativa pir||S04521 7.00E-29
87 CATGGTTTTTGGCA SPD019b01_f matrixin family protein Arabidopsis thaliana ref|NP_177174.1| 4E-11
87 CATGAAAAAAAAAA          
86 CATGGAAAAACCAA SPD028b05_f "putative E2, ubiquitin-conjugating enzyme UBC7 " Arabidopsis thaliana gb|AAO64200.1| 3.00E-36
86 CATGCATCAGGTGG GNf091e07 No similarily      
85 CATGTGTTTTGCCT MFB082a12_f MtN5 Medicago truncatula emb|CAA75593.1| 5.00E-25
83 CATGGTCAATCTGA SPDL044f10_f S-adenosyl-L-methionine synthetase Dendrobium crumenatum gb|AAL16064.1| 2.00E-43
82 CATGAGAGCGAAGT GNLf020c06 No similarily      
82 CATGCGGGTCTGGC no match        
81 CATGGTGCAGAAAT MWM053b03_f fiber protein Fb19 Gossypium barbadense gb|AAR07598.1| 3.00E-22
78 CATGGTCTTTTGGT MPDL091a09_f IgE-dependent histamine-releasing factor homolog Medicago sativa pir||S22489 4.00E-22
75 CATGGGGGAGGAGC MFB065h04_f Eukaryotic translation initiation factor 5A (eIF-5A) Senecio vernalis sp|Q9SC12|IF5A_SENVE 5.00E-35
75 CATGAAATGTTCTT SPDL078b08_f RNase L inhibitor-like protein Oryza sativa (japonica cultivar-group) gb|AAM19067.1| 1.00E-13
73 CATGTTCATTTGGG GENLf086h03 calmodulin 4 Daucus carota gb|AAQ63461.1| 4.00E-45
72 CATGCTGCTCCTGG AW164138.1 putative nitrilase-associated protein Arabidopsis thaliana gb|AAM64577.1| 1.00E-10
71 CATGCTTCTGTAAC SPD024h11_f "formamidase, putative / formamide amidohydrolase, putative" Arabidopsis thaliana ref|NP_568028.1| 1.00E-59
71 CATGCTTCTGTAAC MWM246f12_f probable formamidase (EC 3.5.1.49) F19F18.40 Arabidopsis thaliana pir||T04712 3.00E-55
71 CATGTTACCGTGTT SPDL032e09_f S-adenosyl-L-methionine synthetase Dendrobium crumenatum gb|AAL16064.1| 1.00E-24
70 CATGAGGATGCTTA SPDL100f09_f "peroxidase (EC 1.11.1.7) 2, cationic" Glycine max pir||T06227 5.00E-45
70 CATGGAGAGGAATG BI420579.1 EARLY NODULIN 36A Glycine max sp|Q02918|N36A_SOYBN 1.00E-06
69 CATGGAGTAGCTTG SPD019f05_f unknown protein Oryza sativa (japonica cultivar-group) gb|AAP03422.1| 5E-13
68 CATGTGTGTAGCAG MWL054g07_f PR10-1 protein Medicago truncatula emb|CAA69931.1| 4E-14
68 CATGTTCTCCCCAG no match        
67 CATGTTTAATTGTA SPD092a09_f shaggy-like kinase Ricinus communis emb|CAA72330.1| 8.00E-10
67 CATGAGGGGGTTGT GNf099g07 IDS3 Hordeum vulgare subsp. vulgare dbj|BAB07798.1| 2.00E-07
67 CATGTTTAATTGTA GNf003d10 No similarily      
66 CATGTTTGTAGCTT MR074c10_f gene_id:MSL1.7~unknown protein Arabidopsis thaliana dbj|BAB02669.1| 4.00E-09
66 CATGCGAGACTCTA no match        
65 CATGTATCTCTGTG CB829501 No similarily      
64 CATGAGGGGCCATA SPD078a11_f hypothetical protein ARG10 Vigna radiata pir||T07820 0.000000006
63 CATGAAGGAGCTGA MPDL049a09_f dehydrin   pir||T11744 9.00E-29
63 CATGTATGTGTGTT SPD097d03_f universal stress protein (USP) family protein Arabidopsis thaliana ref|NP_191814.1| 4.00E-17
62 CATGTGGTGGTAAT MWL032f08_f serine decarboxylase Arabidopsis thaliana ref|NP_175036.1| 3.00E-37
62 CATGGTTTGTTCTG SPDL073c01_f P0475H04.11 Oryza sativa (japonica cultivar-group) ref|NP_914175.1| 4.00E-21
62 CATGTCTTTTCTTT GENf051d08 expressed protein Arabidopsis thaliana ref|NP_196583.1| 0.00003
61 CATGCTTGGTCTTG BU494082.1 S-adenosyl-L-homocysteine hydrolase Catharanthus roseus gi|407412|emb|CAA81527.1| 3.00E-71
61 CATGCAGGTCTGAG SPDL096a03_f enolase Lupinus luteus emb|CAB75428.1| 8.00E-53
59 CATGTCAAGGACTA SPDL081e12_f "Fructose-bisphosphate aldolase, cytoplasmic isozyme" Cicer arietinum sp|O65735|ALF_CICAR 2.00E-50
59 CATGACACGCACAA MR053d09_f metallothionein-like protein class II Fagus sylvatica emb|CAA10232.1| 2.00E-26
59 CATGTGAAAATCCT GNf088f02 similar to chloroplast nucleoid DNA binding protein Arabidopsis thaliana ref|NP_671924.1| 9.00E-12
58 CATGAAGGTGAAGG BI420375.1 60S ribosomal protein L19 Capsicum annuum gb|AAR83877.1| 1.00E-66
58 CATGCGAGACTTTG AW719618.1 No similarily      
58 CATGCAAAAAAAAA          
57 CATGATGCATAACA MWM066d01_f ribosomal protein L32 Mercurialis annua gb|AAK43709.1| 5.00E-51
57 CATGTTGTGCTTCT GNf056h09 INDOLE-3-ACETIC ACID INDUCED PROTEIN ARG2 Vigna radiata sp|P32292|ARG2_PHAAU 1E-14
57 CATGTTTAGGAAGC BI420986.1 No similarily      
56 CATGGTGAGACACA SPD047g08_f calmodulin 4 Daucus carota gb|AAQ63461.1| 4.00E-45
56 CATGTAGGTGTACT MRL018b05_f cytochrome P450 Lotus japonicus dbj|BAA93634.1| 3.00E-31
56 CATGCTGTGTAATT CB826748 No similarily      
55 CATGAACAGCACCT GENLf091e03 leghemoglobin Lotus corniculatus var. japonicus dbj|BAB18107.1| 1.00E-61
55 CATGTAACTTTAGT MR025e04_f protease inhibitor/seed storage/lipid transfer protein (LTP) family protein Arabidopsis thaliana ref|NP_190966.1| 2.00E-29
54 CATGATGCAAAGCA MWL036g12_r(3' end) ubiquitin conjugating enzyme Pisum sativum gb|AAA64427.1| 1.00E-67
54 CATGAAGATGCAAT GENLf089e12 No similarily      
54 CATGTTATTTATAT GENf011c11        
53 CATGTTTATTACAC GNf096d11 Isoliquiritigenin 2'-O-methyltransferase Medicago sativa sp|P93324|CHMT_MEDSA 3.00E-34
53 CATGCGTTTGTTCC MFB073a01_f Drm3 Pisum sativum gb|AAM62421.1| 5.00E-20
52 CATGGTTTCTGAGC MFB031a07_f PROTEIN TRANSLATION FACTOR SUI1 HOMOLOG Oryza sativa sp|P33278|SUI1_ORYSA 3.00E-53
50 CATGAAGGGAATTG SPDL085d08_f phosphoenol pyruvate carboxylase Lotus corniculatus gb|AAD31452.1| 5.00E-34
50 CATGAAAACGAAAC AW719491.1 No similarily      

Lotus japonicus
Kazusa DNA Research Institute
Department of Plant Gene Research