Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC021546A_C01 KMC021546A_c01
(557 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P17437|XP2_XENLA Skin secretory protein xP2 precursor (APEG p... 63 2e-09
pir||SKXLAG dermal gland protein APEG precursor - African clawed... 63 2e-09
emb|CAA56558.1| pprB [Pseudomonas putida] 60 2e-08
ref|NP_045241.1| 24 [Equine herpesvirus 4] gi|11278231|pir||T425... 59 4e-08
pir||A46194 neurofilament protein NF-220, high-molecular-weight ... 56 3e-07
>sp|P17437|XP2_XENLA Skin secretory protein xP2 precursor (APEG protein)
Length = 439
Score = 63.2 bits (152), Expect = 2e-09
Identities = 36/92 (39%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Frame = -3
Query: 525 GADKASPSQGAAKAPVPAQG-AKAPVPAKGAKAPVAAQGAKAPAPSADKVVATSPSSDVA 349
GA +P++G A AP PA+G A AP PA+G A GA APAP+ + A +P+ A
Sbjct: 79 GAPAPAPAEGGAPAPAPAEGGAPAPAPAEGGAPAPAEGGAPAPAPAEGEAPAPAPAEGEA 138
Query: 348 ETPVDAPTASSPLASGPASGPDAADAAAPSSA 253
P A + A G A P A+ AP+ A
Sbjct: 139 PAPAPAEGEAPAPAEGEAPAPAPAEVEAPAPA 170
Score = 60.5 bits (145), Expect = 1e-08
Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Frame = -3
Query: 522 ADKASPSQGAAKAPVPAQG-AKAPVPAKG-AKAPVAAQGAKAPAPSADKVVATSPSSDVA 349
A +P++G A AP PA+G A AP PA+G A AP A+G +APAP+ + A +P+ A
Sbjct: 248 APAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEG-EAPAPAEGEAPAPAPAEGEA 306
Query: 348 ETPVDAPTASSPLASGPASGPDAADAAAPSSASSTTKVG 232
P A + A G A A+ AP+ A + +VG
Sbjct: 307 PAPAPAEGGAPSPAEGGAPAAAPAEGGAPAPAPAPVEVG 345
Score = 60.1 bits (144), Expect = 2e-08
Identities = 38/93 (40%), Positives = 51/93 (53%), Gaps = 3/93 (3%)
Frame = -3
Query: 522 ADKASPSQGAAKAPVPAQG-AKAPVPAKG-AKAPVAAQG-AKAPAPSADKVVATSPSSDV 352
A +P++G A AP PA+G A AP PA+G A AP A+G A APAP+ + A +P+
Sbjct: 218 APAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGE 277
Query: 351 AETPVDAPTASSPLASGPASGPDAADAAAPSSA 253
A P A + A G A P A+ AP+ A
Sbjct: 278 APAPAPAEGEAPAPAEGEAPAPAPAEGEAPAPA 310
Score = 59.7 bits (143), Expect = 2e-08
Identities = 39/94 (41%), Positives = 52/94 (54%), Gaps = 4/94 (4%)
Frame = -3
Query: 522 ADKASPSQGAAKAPVPAQG-AKAPVPAKG-AKAPVAAQGAKAPAPSADKVVATSPSSDVA 349
A +P++G A AP PA+G A AP PA+G A AP A+G +APAP+ + A +P+
Sbjct: 208 APAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEG-EAPAPAPAEGEAPAPAPAEG 266
Query: 348 ETPVDAPTASSPLASGPASG--PDAADAAAPSSA 253
E P AP A PA G P A+ AP+ A
Sbjct: 267 EAPAPAPAEGEAPAPAPAEGEAPAPAEGEAPAPA 300
Score = 59.7 bits (143), Expect = 2e-08
Identities = 39/93 (41%), Positives = 49/93 (51%), Gaps = 3/93 (3%)
Frame = -3
Query: 522 ADKASPSQGAAKAPVPAQG-AKAPVPAKG-AKAPVAAQG-AKAPAPSADKVVATSPSSDV 352
A +P++G A AP PA+G A AP PA+G A AP A+G A APAP+ + A +P+
Sbjct: 166 APAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAPAEGEAPAPAPAE 225
Query: 351 AETPVDAPTASSPLASGPASGPDAADAAAPSSA 253
E P AP A PA G A A A A
Sbjct: 226 GEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEA 258
Score = 59.3 bits (142), Expect = 3e-08
Identities = 38/95 (40%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Frame = -3
Query: 510 SPSQGAAKAPVPAQG-AKAPVPAKG-AKAPVAAQG-------AKAPAPSADKVVATSPSS 358
+P++G A AP PA+G A AP PA+G A AP A+G +APAP+ +V A +P+
Sbjct: 112 APAEGGAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAEGEAPAPAPAEVEAPAPAP 171
Query: 357 DVAETPVDAPTASSPLASGPASGPDAADAAAPSSA 253
E P AP A PA G A A A A
Sbjct: 172 AEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEA 206
Score = 58.9 bits (141), Expect = 4e-08
Identities = 41/107 (38%), Positives = 54/107 (50%), Gaps = 7/107 (6%)
Frame = -3
Query: 552 QVSKPIVFPGADKA---SPSQGAAKAPVPAQG-AKAPVPAKG---AKAPVAAQGAKAPAP 394
+V P P +A +P++G A AP PA+G A AP PA+G A AP A+G +APAP
Sbjct: 163 EVEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAPAEG-EAPAP 221
Query: 393 SADKVVATSPSSDVAETPVDAPTASSPLASGPASGPDAADAAAPSSA 253
+ + A +P+ E P AP A PA G A A A A
Sbjct: 222 APAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEA 268
Score = 58.2 bits (139), Expect = 7e-08
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Frame = -3
Query: 522 ADKASPSQGAAKAPVPAQGAKAPVPAKG-AKAPVAAQGAKAPAPSADKVVATSPSSDVAE 346
A +P++G A AP PA+G +AP PA+G A AP A+ +APAP+ + A +P+ E
Sbjct: 128 APAPAPAEGEAPAPAPAEG-EAPAPAEGEAPAPAPAE-VEAPAPAPAEGEAPAPAPAEGE 185
Query: 345 TPVDAPTASSPLASGPASGPDAADAAAPSSASS 247
P AP A PA G A A AP+ +
Sbjct: 186 APAPAPAEGEAPAPAPAEGEAPAPAPAPAEGEA 218
Score = 58.2 bits (139), Expect = 7e-08
Identities = 43/107 (40%), Positives = 53/107 (49%), Gaps = 3/107 (2%)
Frame = -3
Query: 522 ADKASPSQGAAKAPVPAQG-AKAPVPAKG-AKAPVAAQG-AKAPAPSADKVVATSPSSDV 352
A +P++G A AP PA+G A AP PA+G A AP A+G A APAP+ + A +P
Sbjct: 228 APAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAP---- 283
Query: 351 AETPVDAPTASSPLASGPASGPDAADAAAPSSASSTTKVGLVGAVMA 211
AE AP A PA G A A A A S + G A A
Sbjct: 284 AEGEAPAPAEGEAPAPAPAEGEAPAPAPAEGGAPSPAEGGAPAAAPA 330
Score = 57.8 bits (138), Expect = 9e-08
Identities = 35/95 (36%), Positives = 47/95 (48%), Gaps = 9/95 (9%)
Frame = -3
Query: 510 SPSQGAAKAPVPAQG---------AKAPVPAKGAKAPVAAQGAKAPAPSADKVVATSPSS 358
+P++G A AP PA+G A AP PA+GA+ A GA APAP+ A +P+
Sbjct: 38 APAEGGAPAPAPAEGEAPAPAEGGAPAPAPAEGAEPAPADGGAPAPAPAEGGAPAPAPAE 97
Query: 357 DVAETPVDAPTASSPLASGPASGPDAADAAAPSSA 253
A P A + A G A P A+ AP+ A
Sbjct: 98 GGAPAPAPAEGGAPAPAEGGAPAPAPAEGEAPAPA 132
Score = 57.8 bits (138), Expect = 9e-08
Identities = 37/89 (41%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Frame = -3
Query: 510 SPSQGAAKAPVPAQ-GAKAPVPAKG-AKAPVAAQG-AKAPAPSADKVVATSPSSDVAETP 340
+P++G A AP PA+ A AP PA+G A AP A+G A APAP+ + A +P+ A P
Sbjct: 150 APAEGEAPAPAPAEVEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAP 209
Query: 339 VDAPTASSPLASGPASGPDAADAAAPSSA 253
AP A PA G A A A A
Sbjct: 210 APAPAEGEAPAPAPAEGEAPAPAPAEGEA 238
Score = 57.8 bits (138), Expect = 9e-08
Identities = 38/93 (40%), Positives = 48/93 (50%), Gaps = 3/93 (3%)
Frame = -3
Query: 522 ADKASPSQGAAKAPVPAQG-AKAPVPAKG-AKAPVAAQG-AKAPAPSADKVVATSPSSDV 352
A +P++ A AP PA+G A AP PA+G A AP A+G A APAP+ + A +P+
Sbjct: 156 APAPAPAEVEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAPAE 215
Query: 351 AETPVDAPTASSPLASGPASGPDAADAAAPSSA 253
E P AP A PA G A A A A
Sbjct: 216 GEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEA 248
Score = 57.4 bits (137), Expect = 1e-07
Identities = 39/105 (37%), Positives = 54/105 (51%), Gaps = 14/105 (13%)
Frame = -3
Query: 525 GADKASPSQGAAKAPVPAQG---------AKAPVPAKG-AKAPVAAQGAKAPAPSADKVV 376
GA +P++G A AP PA+G A AP PA+G A AP A+G +APAP+ +
Sbjct: 89 GAPAPAPAEGGAPAPAPAEGGAPAPAEGGAPAPAPAEGEAPAPAPAEG-EAPAPAPAEGE 147
Query: 375 ATSPSSDVAETP----VDAPTASSPLASGPASGPDAADAAAPSSA 253
A +P+ A P V+AP + PA P +A AP+ A
Sbjct: 148 APAPAEGEAPAPAPAEVEAPAPAPAEGEAPAPAPAEGEAPAPAPA 192
Score = 55.1 bits (131), Expect = 6e-07
Identities = 37/94 (39%), Positives = 47/94 (49%), Gaps = 4/94 (4%)
Frame = -3
Query: 522 ADKASPSQGAAKAPVPAQG-AKAPVPAKG---AKAPVAAQGAKAPAPSADKVVATSPSSD 355
A +P++G A AP PA+G A AP PA A AP A+G +APAP+ + A +P+
Sbjct: 186 APAPAPAEGEAPAPAPAEGEAPAPAPAPAEGEAPAPAPAEG-EAPAPAPAEGEAPAPAPA 244
Query: 354 VAETPVDAPTASSPLASGPASGPDAADAAAPSSA 253
E P AP A PA G A A A A
Sbjct: 245 EGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEA 278
Score = 54.7 bits (130), Expect = 8e-07
Identities = 37/94 (39%), Positives = 47/94 (49%), Gaps = 4/94 (4%)
Frame = -3
Query: 522 ADKASPSQGAAKAPVPAQG---AKAPVPAKG-AKAPVAAQGAKAPAPSADKVVATSPSSD 355
A +P++G A AP PA A AP PA+G A AP A+G +APAP+ + A +P+
Sbjct: 196 APAPAPAEGEAPAPAPAPAEGEAPAPAPAEGEAPAPAPAEG-EAPAPAPAEGEAPAPAPA 254
Query: 354 VAETPVDAPTASSPLASGPASGPDAADAAAPSSA 253
E P AP A PA G A A A A
Sbjct: 255 EGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEA 288
Score = 50.1 bits (118), Expect = 2e-05
Identities = 32/84 (38%), Positives = 42/84 (49%), Gaps = 1/84 (1%)
Frame = -3
Query: 501 QGAAKAPVPAQGAKAPVPAK-GAKAPVAAQGAKAPAPSADKVVATSPSSDVAETPVDAPT 325
Q A P PA+G AP PA+ GA AP A+G +APAP+ A +P+ P D
Sbjct: 23 QDAGGEPAPAEGV-APAPAEGGAPAPAPAEG-EAPAPAEGGAPAPAPAEGAEPAPADGGA 80
Query: 324 ASSPLASGPASGPDAADAAAPSSA 253
+ A G A P A+ AP+ A
Sbjct: 81 PAPAPAEGGAPAPAPAEGGAPAPA 104
Score = 48.5 bits (114), Expect = 5e-05
Identities = 30/86 (34%), Positives = 39/86 (44%), Gaps = 1/86 (1%)
Frame = -3
Query: 507 PSQGAAKAPVPAQ-GAKAPVPAKGAKAPVAAQGAKAPAPSADKVVATSPSSDVAETPVDA 331
P+ AP PA+ GA AP PA+G A GA APAP+ A + A P +
Sbjct: 29 PAPAEGVAPAPAEGGAPAPAPAEGEAPAPAEGGAPAPAPAEGAEPAPADGGAPAPAPAEG 88
Query: 330 PTASSPLASGPASGPDAADAAAPSSA 253
+ A G A P A+ AP+ A
Sbjct: 89 GAPAPAPAEGGAPAPAPAEGGAPAPA 114
Score = 47.0 bits (110), Expect = 2e-04
Identities = 30/80 (37%), Positives = 40/80 (49%), Gaps = 10/80 (12%)
Frame = -3
Query: 522 ADKASPSQGAAKAPVPAQG---------AKAPVPAKG-AKAPVAAQGAKAPAPSADKVVA 373
A +P++G A AP PA+G A AP PA+G A AP A+G AP+P+ A
Sbjct: 268 APAPAPAEGEAPAPAPAEGEAPAPAEGEAPAPAPAEGEAPAPAPAEGG-APSPAEGGAPA 326
Query: 372 TSPSSDVAETPVDAPTASSP 313
+P+ A P AP P
Sbjct: 327 AAPAEGGAPAPAPAPVEVGP 346
Score = 37.4 bits (85), Expect = 0.13
Identities = 33/89 (37%), Positives = 37/89 (41%), Gaps = 4/89 (4%)
Frame = +2
Query: 260 EGAAASAASG--PEAGPEANGLDAVGASTGVSATSLEGDVATTLSAEGAGALAPCAATG- 430
EGA + A G P P G A + G + + AEG GA AP A G
Sbjct: 69 EGAEPAPADGGAPAPAPAEGGAPAPAPAEGGAPAPAPAEGGAPAPAEG-GAPAPAPAEGE 127
Query: 431 ALAPLAGTG-ALAPCAGTGALAAPCEGEA 514
A AP G A AP G AP EGEA
Sbjct: 128 APAPAPAEGEAPAPAPAEGEAPAPAEGEA 156
Score = 32.7 bits (73), Expect = 3.1
Identities = 32/89 (35%), Positives = 36/89 (39%), Gaps = 4/89 (4%)
Frame = +2
Query: 260 EGAAASAASGPEAGPEANGLDAVGASTGVSATSLEGDVATTLSAEGAGALAPCAATG--- 430
EG A + A P G A G + + EG+ AEG A AP A G
Sbjct: 183 EGEAPAPA--PAEGEAPAPAPAEGEAPAPAPAPAEGEAPAPAPAEGE-APAPAPAEGEAP 239
Query: 431 ALAPLAGTG-ALAPCAGTGALAAPCEGEA 514
A AP G A AP G AP EGEA
Sbjct: 240 APAPAEGEAPAPAPAEGEAPAPAPAEGEA 268
Score = 31.6 bits (70), Expect = 6.9
Identities = 31/91 (34%), Positives = 36/91 (39%), Gaps = 6/91 (6%)
Frame = +2
Query: 260 EGAAASAASGPEAGPEANGLDAVGASTGVSATSLEGDVATTLSAEGAGALAPCAATG--- 430
EG A + A G P ++A + EG+ AEG A AP A G
Sbjct: 145 EGEAPAPAEGEAPAPAPAEVEAPAPAPA------EGEAPAPAPAEGE-APAPAPAEGEAP 197
Query: 431 ALAPLAGTG---ALAPCAGTGALAAPCEGEA 514
A AP G A AP G AP EGEA
Sbjct: 198 APAPAEGEAPAPAPAPAEGEAPAPAPAEGEA 228
>pir||SKXLAG dermal gland protein APEG precursor - African clawed frog
(fragment) gi|1334643|emb|CAA35759.1| APEG precursor
protein [Xenopus laevis]
Length = 416
Score = 63.2 bits (152), Expect = 2e-09
Identities = 36/92 (39%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Frame = -3
Query: 525 GADKASPSQGAAKAPVPAQG-AKAPVPAKGAKAPVAAQGAKAPAPSADKVVATSPSSDVA 349
GA +P++G A AP PA+G A AP PA+G A GA APAP+ + A +P+ A
Sbjct: 77 GAPAPAPAEGGAPAPAPAEGGAPAPAPAEGGAPAPAEGGAPAPAPAEGEAPAPAPAEGEA 136
Query: 348 ETPVDAPTASSPLASGPASGPDAADAAAPSSA 253
P A + A G A P A+ AP+ A
Sbjct: 137 PAPAPAEGEAPAPAEGEAPAPAPAEVEAPAPA 168
Score = 60.5 bits (145), Expect = 1e-08
Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Frame = -3
Query: 522 ADKASPSQGAAKAPVPAQG-AKAPVPAKG-AKAPVAAQGAKAPAPSADKVVATSPSSDVA 349
A +P++G A AP PA+G A AP PA+G A AP A+G +APAP+ + A +P+ A
Sbjct: 246 APAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEG-EAPAPAEGEAPAPAPAEGEA 304
Query: 348 ETPVDAPTASSPLASGPASGPDAADAAAPSSASSTTKVG 232
P A + A G A A+ AP+ A + +VG
Sbjct: 305 PAPAPAEGGAPSPAEGGAPAAAPAEGGAPAPAPAPVEVG 343
Score = 60.1 bits (144), Expect = 2e-08
Identities = 38/93 (40%), Positives = 51/93 (53%), Gaps = 3/93 (3%)
Frame = -3
Query: 522 ADKASPSQGAAKAPVPAQG-AKAPVPAKG-AKAPVAAQG-AKAPAPSADKVVATSPSSDV 352
A +P++G A AP PA+G A AP PA+G A AP A+G A APAP+ + A +P+
Sbjct: 216 APAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGE 275
Query: 351 AETPVDAPTASSPLASGPASGPDAADAAAPSSA 253
A P A + A G A P A+ AP+ A
Sbjct: 276 APAPAPAEGEAPAPAEGEAPAPAPAEGEAPAPA 308
Score = 59.7 bits (143), Expect = 2e-08
Identities = 39/94 (41%), Positives = 52/94 (54%), Gaps = 4/94 (4%)
Frame = -3
Query: 522 ADKASPSQGAAKAPVPAQG-AKAPVPAKG-AKAPVAAQGAKAPAPSADKVVATSPSSDVA 349
A +P++G A AP PA+G A AP PA+G A AP A+G +APAP+ + A +P+
Sbjct: 206 APAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEG-EAPAPAPAEGEAPAPAPAEG 264
Query: 348 ETPVDAPTASSPLASGPASG--PDAADAAAPSSA 253
E P AP A PA G P A+ AP+ A
Sbjct: 265 EAPAPAPAEGEAPAPAPAEGEAPAPAEGEAPAPA 298
Score = 59.7 bits (143), Expect = 2e-08
Identities = 39/93 (41%), Positives = 49/93 (51%), Gaps = 3/93 (3%)
Frame = -3
Query: 522 ADKASPSQGAAKAPVPAQG-AKAPVPAKG-AKAPVAAQG-AKAPAPSADKVVATSPSSDV 352
A +P++G A AP PA+G A AP PA+G A AP A+G A APAP+ + A +P+
Sbjct: 164 APAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAPAEGEAPAPAPAE 223
Query: 351 AETPVDAPTASSPLASGPASGPDAADAAAPSSA 253
E P AP A PA G A A A A
Sbjct: 224 GEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEA 256
Score = 59.3 bits (142), Expect = 3e-08
Identities = 38/95 (40%), Positives = 49/95 (51%), Gaps = 9/95 (9%)
Frame = -3
Query: 510 SPSQGAAKAPVPAQG-AKAPVPAKG-AKAPVAAQG-------AKAPAPSADKVVATSPSS 358
+P++G A AP PA+G A AP PA+G A AP A+G +APAP+ +V A +P+
Sbjct: 110 APAEGGAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAEGEAPAPAPAEVEAPAPAP 169
Query: 357 DVAETPVDAPTASSPLASGPASGPDAADAAAPSSA 253
E P AP A PA G A A A A
Sbjct: 170 AEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEA 204
Score = 58.9 bits (141), Expect = 4e-08
Identities = 41/107 (38%), Positives = 54/107 (50%), Gaps = 7/107 (6%)
Frame = -3
Query: 552 QVSKPIVFPGADKA---SPSQGAAKAPVPAQG-AKAPVPAKG---AKAPVAAQGAKAPAP 394
+V P P +A +P++G A AP PA+G A AP PA+G A AP A+G +APAP
Sbjct: 161 EVEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAPAEG-EAPAP 219
Query: 393 SADKVVATSPSSDVAETPVDAPTASSPLASGPASGPDAADAAAPSSA 253
+ + A +P+ E P AP A PA G A A A A
Sbjct: 220 APAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEA 266
Score = 58.2 bits (139), Expect = 7e-08
Identities = 36/93 (38%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Frame = -3
Query: 522 ADKASPSQGAAKAPVPAQGAKAPVPAKG-AKAPVAAQGAKAPAPSADKVVATSPSSDVAE 346
A +P++G A AP PA+G +AP PA+G A AP A+ +APAP+ + A +P+ E
Sbjct: 126 APAPAPAEGEAPAPAPAEG-EAPAPAEGEAPAPAPAE-VEAPAPAPAEGEAPAPAPAEGE 183
Query: 345 TPVDAPTASSPLASGPASGPDAADAAAPSSASS 247
P AP A PA G A A AP+ +
Sbjct: 184 APAPAPAEGEAPAPAPAEGEAPAPAPAPAEGEA 216
Score = 58.2 bits (139), Expect = 7e-08
Identities = 43/107 (40%), Positives = 53/107 (49%), Gaps = 3/107 (2%)
Frame = -3
Query: 522 ADKASPSQGAAKAPVPAQG-AKAPVPAKG-AKAPVAAQG-AKAPAPSADKVVATSPSSDV 352
A +P++G A AP PA+G A AP PA+G A AP A+G A APAP+ + A +P
Sbjct: 226 APAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAP---- 281
Query: 351 AETPVDAPTASSPLASGPASGPDAADAAAPSSASSTTKVGLVGAVMA 211
AE AP A PA G A A A A S + G A A
Sbjct: 282 AEGEAPAPAEGEAPAPAPAEGEAPAPAPAEGGAPSPAEGGAPAAAPA 328
Score = 57.8 bits (138), Expect = 9e-08
Identities = 35/95 (36%), Positives = 47/95 (48%), Gaps = 9/95 (9%)
Frame = -3
Query: 510 SPSQGAAKAPVPAQG---------AKAPVPAKGAKAPVAAQGAKAPAPSADKVVATSPSS 358
+P++G A AP PA+G A AP PA+GA+ A GA APAP+ A +P+
Sbjct: 36 APAEGGAPAPAPAEGEAPAPAEGGAPAPAPAEGAEPAPADGGAPAPAPAEGGAPAPAPAE 95
Query: 357 DVAETPVDAPTASSPLASGPASGPDAADAAAPSSA 253
A P A + A G A P A+ AP+ A
Sbjct: 96 GGAPAPAPAEGGAPAPAEGGAPAPAPAEGEAPAPA 130
Score = 57.8 bits (138), Expect = 9e-08
Identities = 37/89 (41%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Frame = -3
Query: 510 SPSQGAAKAPVPAQ-GAKAPVPAKG-AKAPVAAQG-AKAPAPSADKVVATSPSSDVAETP 340
+P++G A AP PA+ A AP PA+G A AP A+G A APAP+ + A +P+ A P
Sbjct: 148 APAEGEAPAPAPAEVEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAP 207
Query: 339 VDAPTASSPLASGPASGPDAADAAAPSSA 253
AP A PA G A A A A
Sbjct: 208 APAPAEGEAPAPAPAEGEAPAPAPAEGEA 236
Score = 57.8 bits (138), Expect = 9e-08
Identities = 38/93 (40%), Positives = 48/93 (50%), Gaps = 3/93 (3%)
Frame = -3
Query: 522 ADKASPSQGAAKAPVPAQG-AKAPVPAKG-AKAPVAAQG-AKAPAPSADKVVATSPSSDV 352
A +P++ A AP PA+G A AP PA+G A AP A+G A APAP+ + A +P+
Sbjct: 154 APAPAPAEVEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEAPAPAPAPAE 213
Query: 351 AETPVDAPTASSPLASGPASGPDAADAAAPSSA 253
E P AP A PA G A A A A
Sbjct: 214 GEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEA 246
Score = 57.4 bits (137), Expect = 1e-07
Identities = 39/105 (37%), Positives = 54/105 (51%), Gaps = 14/105 (13%)
Frame = -3
Query: 525 GADKASPSQGAAKAPVPAQG---------AKAPVPAKG-AKAPVAAQGAKAPAPSADKVV 376
GA +P++G A AP PA+G A AP PA+G A AP A+G +APAP+ +
Sbjct: 87 GAPAPAPAEGGAPAPAPAEGGAPAPAEGGAPAPAPAEGEAPAPAPAEG-EAPAPAPAEGE 145
Query: 375 ATSPSSDVAETP----VDAPTASSPLASGPASGPDAADAAAPSSA 253
A +P+ A P V+AP + PA P +A AP+ A
Sbjct: 146 APAPAEGEAPAPAPAEVEAPAPAPAEGEAPAPAPAEGEAPAPAPA 190
Score = 55.1 bits (131), Expect = 6e-07
Identities = 37/94 (39%), Positives = 47/94 (49%), Gaps = 4/94 (4%)
Frame = -3
Query: 522 ADKASPSQGAAKAPVPAQG-AKAPVPAKG---AKAPVAAQGAKAPAPSADKVVATSPSSD 355
A +P++G A AP PA+G A AP PA A AP A+G +APAP+ + A +P+
Sbjct: 184 APAPAPAEGEAPAPAPAEGEAPAPAPAPAEGEAPAPAPAEG-EAPAPAPAEGEAPAPAPA 242
Query: 354 VAETPVDAPTASSPLASGPASGPDAADAAAPSSA 253
E P AP A PA G A A A A
Sbjct: 243 EGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEA 276
Score = 54.7 bits (130), Expect = 8e-07
Identities = 37/94 (39%), Positives = 47/94 (49%), Gaps = 4/94 (4%)
Frame = -3
Query: 522 ADKASPSQGAAKAPVPAQG---AKAPVPAKG-AKAPVAAQGAKAPAPSADKVVATSPSSD 355
A +P++G A AP PA A AP PA+G A AP A+G +APAP+ + A +P+
Sbjct: 194 APAPAPAEGEAPAPAPAPAEGEAPAPAPAEGEAPAPAPAEG-EAPAPAPAEGEAPAPAPA 252
Query: 354 VAETPVDAPTASSPLASGPASGPDAADAAAPSSA 253
E P AP A PA G A A A A
Sbjct: 253 EGEAPAPAPAEGEAPAPAPAEGEAPAPAPAEGEA 286
Score = 50.1 bits (118), Expect = 2e-05
Identities = 32/84 (38%), Positives = 42/84 (49%), Gaps = 1/84 (1%)
Frame = -3
Query: 501 QGAAKAPVPAQGAKAPVPAK-GAKAPVAAQGAKAPAPSADKVVATSPSSDVAETPVDAPT 325
Q A P PA+G AP PA+ GA AP A+G +APAP+ A +P+ P D
Sbjct: 21 QDAGGEPAPAEGV-APAPAEGGAPAPAPAEG-EAPAPAEGGAPAPAPAEGAEPAPADGGA 78
Query: 324 ASSPLASGPASGPDAADAAAPSSA 253
+ A G A P A+ AP+ A
Sbjct: 79 PAPAPAEGGAPAPAPAEGGAPAPA 102
Score = 48.5 bits (114), Expect = 5e-05
Identities = 30/86 (34%), Positives = 39/86 (44%), Gaps = 1/86 (1%)
Frame = -3
Query: 507 PSQGAAKAPVPAQ-GAKAPVPAKGAKAPVAAQGAKAPAPSADKVVATSPSSDVAETPVDA 331
P+ AP PA+ GA AP PA+G A GA APAP+ A + A P +
Sbjct: 27 PAPAEGVAPAPAEGGAPAPAPAEGEAPAPAEGGAPAPAPAEGAEPAPADGGAPAPAPAEG 86
Query: 330 PTASSPLASGPASGPDAADAAAPSSA 253
+ A G A P A+ AP+ A
Sbjct: 87 GAPAPAPAEGGAPAPAPAEGGAPAPA 112
Score = 47.0 bits (110), Expect = 2e-04
Identities = 30/80 (37%), Positives = 40/80 (49%), Gaps = 10/80 (12%)
Frame = -3
Query: 522 ADKASPSQGAAKAPVPAQG---------AKAPVPAKG-AKAPVAAQGAKAPAPSADKVVA 373
A +P++G A AP PA+G A AP PA+G A AP A+G AP+P+ A
Sbjct: 266 APAPAPAEGEAPAPAPAEGEAPAPAEGEAPAPAPAEGEAPAPAPAEGG-APSPAEGGAPA 324
Query: 372 TSPSSDVAETPVDAPTASSP 313
+P+ A P AP P
Sbjct: 325 AAPAEGGAPAPAPAPVEVGP 344
Score = 37.4 bits (85), Expect = 0.13
Identities = 33/89 (37%), Positives = 37/89 (41%), Gaps = 4/89 (4%)
Frame = +2
Query: 260 EGAAASAASG--PEAGPEANGLDAVGASTGVSATSLEGDVATTLSAEGAGALAPCAATG- 430
EGA + A G P P G A + G + + AEG GA AP A G
Sbjct: 67 EGAEPAPADGGAPAPAPAEGGAPAPAPAEGGAPAPAPAEGGAPAPAEG-GAPAPAPAEGE 125
Query: 431 ALAPLAGTG-ALAPCAGTGALAAPCEGEA 514
A AP G A AP G AP EGEA
Sbjct: 126 APAPAPAEGEAPAPAPAEGEAPAPAEGEA 154
Score = 32.7 bits (73), Expect = 3.1
Identities = 32/89 (35%), Positives = 36/89 (39%), Gaps = 4/89 (4%)
Frame = +2
Query: 260 EGAAASAASGPEAGPEANGLDAVGASTGVSATSLEGDVATTLSAEGAGALAPCAATG--- 430
EG A + A P G A G + + EG+ AEG A AP A G
Sbjct: 181 EGEAPAPA--PAEGEAPAPAPAEGEAPAPAPAPAEGEAPAPAPAEGE-APAPAPAEGEAP 237
Query: 431 ALAPLAGTG-ALAPCAGTGALAAPCEGEA 514
A AP G A AP G AP EGEA
Sbjct: 238 APAPAEGEAPAPAPAEGEAPAPAPAEGEA 266
Score = 31.6 bits (70), Expect = 6.9
Identities = 31/91 (34%), Positives = 36/91 (39%), Gaps = 6/91 (6%)
Frame = +2
Query: 260 EGAAASAASGPEAGPEANGLDAVGASTGVSATSLEGDVATTLSAEGAGALAPCAATG--- 430
EG A + A G P ++A + EG+ AEG A AP A G
Sbjct: 143 EGEAPAPAEGEAPAPAPAEVEAPAPAPA------EGEAPAPAPAEGE-APAPAPAEGEAP 195
Query: 431 ALAPLAGTG---ALAPCAGTGALAAPCEGEA 514
A AP G A AP G AP EGEA
Sbjct: 196 APAPAEGEAPAPAPAPAEGEAPAPAPAEGEA 226
>emb|CAA56558.1| pprB [Pseudomonas putida]
Length = 298
Score = 60.1 bits (144), Expect = 2e-08
Identities = 40/104 (38%), Positives = 49/104 (46%), Gaps = 5/104 (4%)
Frame = -3
Query: 546 SKPIVFPGADKASPSQGAAKAPVPAQGAKAPVPAKGAKAPVAAQGAKAPA-----PSADK 382
+KP P A KA AAK AKAP A AK AKAPA P+A K
Sbjct: 197 AKPAAKPAAGKAPAKAAAAKPAAKPAAAKAPAKAAAAKPAAKPAAAKAPAKPAAKPAAAK 256
Query: 381 VVATSPSSDVAETPVDAPTASSPLASGPASGPDAADAAAPSSAS 250
T P++ TP A +++P + AS P + A APSSAS
Sbjct: 257 PAETKPATAATSTPAAATNSAAPATA--ASAPASTPAQAPSSAS 298
Score = 49.7 bits (117), Expect = 2e-05
Identities = 33/103 (32%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Frame = -3
Query: 546 SKPIVFPGADKASPSQGAAKAPVPAQGAKAPVPAKGAKAPVAAQGAKAPAPSADKVVATS 367
+KP K + ++ AAK KAP A AK AKAPA +A A
Sbjct: 179 AKPAAAKAPAKTAAAKPAAKPAAKPAAGKAPAKAAAAKPAAKPAAAKAPAKAAAAKPAAK 238
Query: 366 PSSDVAET-PVDAPTASSPLASGPASGPDAADAAAPSSASSTT 241
P++ A P P A+ P + PA+ + AAA +SA+ T
Sbjct: 239 PAAAKAPAKPAAKPAAAKPAETKPATAATSTPAAATNSAAPAT 281
Score = 47.0 bits (110), Expect = 2e-04
Identities = 32/89 (35%), Positives = 43/89 (47%), Gaps = 2/89 (2%)
Frame = -3
Query: 513 ASPSQGAAKAPVPAQGAKAPVPAKGAKAPVAAQGAKAPA--PSADKVVATSPSSDVAETP 340
A P+ AA A PA+ A P AK AA+ A PA P+A K A + ++ A P
Sbjct: 162 AKPAAKAATAKAPAKAAAKPAAAKAPAKTAAAKPAAKPAAKPAAGKAPAKAAAAKPAAKP 221
Query: 339 VDAPTASSPLASGPASGPDAADAAAPSSA 253
A + A+ PA+ P AA A A +A
Sbjct: 222 AAAKAPAKAAAAKPAAKPAAAKAPAKPAA 250
Score = 45.4 bits (106), Expect = 5e-04
Identities = 35/104 (33%), Positives = 51/104 (48%), Gaps = 2/104 (1%)
Frame = -3
Query: 555 LQVSKPIVFPGADKASPSQGAAK--APVPAQGAKAPVPAKGAKAPVAAQGAKAPAPSADK 382
++ +KP KA+ ++ AA+ A A+ A A PAK A P AA KAPA K
Sbjct: 137 VKAAKPAAAKAPAKAAATKPAARTAAKPAAKAATAKAPAKAAAKPAAA---KAPA----K 189
Query: 381 VVATSPSSDVAETPVDAPTASSPLASGPASGPDAADAAAPSSAS 250
A P++ A P + A+ PA+ P AA A A ++A+
Sbjct: 190 TAAAKPAAKPAAKPAAGKAPAKAAAAKPAAKPAAAKAPAKAAAA 233
Score = 42.7 bits (99), Expect = 0.003
Identities = 33/94 (35%), Positives = 39/94 (41%)
Frame = -3
Query: 528 PGADKASPSQGAAKAPVPAQGAKAPVPAKGAKAPVAAQGAKAPAPSADKVVATSPSSDVA 349
P A KA P++ AA P AK A AKAP A A A + K A P A
Sbjct: 142 PAAAKA-PAKAAATKPAARTAAKPAAKAATAKAPAKAAAKPAAAKAPAKTAAAKP----A 196
Query: 348 ETPVDAPTASSPLASGPASGPDAADAAAPSSASS 247
P P A A A+ P A AAA + A +
Sbjct: 197 AKPAAKPAAGKAPAKAAAAKPAAKPAAAKAPAKA 230
>ref|NP_045241.1| 24 [Equine herpesvirus 4] gi|11278231|pir||T42567 tegument protein 24
- equine herpesvirus 4 (strain NS80567)
gi|2605967|gb|AAC59539.1| 24 [Equine herpesvirus 4]
Length = 3534
Score = 58.9 bits (141), Expect = 4e-08
Identities = 43/108 (39%), Positives = 55/108 (50%), Gaps = 7/108 (6%)
Frame = -3
Query: 546 SKPIVFPGADKAS----PSQGAAKAPVPAQGAKAPVPAKGAKAPVAAQGAKAPAPSADKV 379
SKP P K + PS+ AA AP P++ A AP P+K A AP ++ A APAPS K
Sbjct: 2810 SKPAAAPAPSKPAAAPAPSKPAA-APAPSKPAAAPAPSKPAAAPAPSKPAAAPAPS--KP 2866
Query: 378 VATSPSSDVAETPVDAPTASSPLASGPASGP---DAADAAAPSSASST 244
A S A P + A++P S PA+ P A A APS +T
Sbjct: 2867 AAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPQNT 2914
Score = 57.8 bits (138), Expect = 9e-08
Identities = 41/101 (40%), Positives = 54/101 (52%), Gaps = 5/101 (4%)
Frame = -3
Query: 546 SKPIVFPGADKAS----PSQGAAKAPVPAQGAKAPVPAKGAKAPVAAQGAKAPAPSADKV 379
SKP P K + PS+ AA AP P++ A AP P+K A AP ++ A APAPS K
Sbjct: 2765 SKPAAAPAPSKPAAAPAPSKPAA-APAPSKPAAAPAPSKPAAAPAPSKPAAAPAPS--KP 2821
Query: 378 VATSPSSDVAETPVDAPTASSPLASGPASGP-DAADAAAPS 259
A S A P + A++P S PA+ P + AAAP+
Sbjct: 2822 AAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPA 2862
Score = 57.8 bits (138), Expect = 9e-08
Identities = 41/101 (40%), Positives = 54/101 (52%), Gaps = 5/101 (4%)
Frame = -3
Query: 546 SKPIVFPGADKAS----PSQGAAKAPVPAQGAKAPVPAKGAKAPVAAQGAKAPAPSADKV 379
SKP P K + PS+ AA AP P++ A AP P+K A AP ++ A APAPS K
Sbjct: 2729 SKPAAAPAPSKPAAAPAPSKPAA-APAPSKPAAAPAPSKPAAAPAPSKPAAAPAPS--KP 2785
Query: 378 VATSPSSDVAETPVDAPTASSPLASGPASGP-DAADAAAPS 259
A S A P + A++P S PA+ P + AAAP+
Sbjct: 2786 AAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPA 2826
Score = 57.8 bits (138), Expect = 9e-08
Identities = 41/101 (40%), Positives = 54/101 (52%), Gaps = 5/101 (4%)
Frame = -3
Query: 546 SKPIVFPGADKAS----PSQGAAKAPVPAQGAKAPVPAKGAKAPVAAQGAKAPAPSADKV 379
SKP P K + PS+ AA AP P++ A AP P+K A AP ++ A APAPS K
Sbjct: 2756 SKPAAAPAPSKPAAAPAPSKPAA-APAPSKPAAAPAPSKPAAAPAPSKPAAAPAPS--KP 2812
Query: 378 VATSPSSDVAETPVDAPTASSPLASGPASGP-DAADAAAPS 259
A S A P + A++P S PA+ P + AAAP+
Sbjct: 2813 AAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPA 2853
Score = 57.8 bits (138), Expect = 9e-08
Identities = 41/101 (40%), Positives = 54/101 (52%), Gaps = 5/101 (4%)
Frame = -3
Query: 546 SKPIVFPGADKAS----PSQGAAKAPVPAQGAKAPVPAKGAKAPVAAQGAKAPAPSADKV 379
SKP P K + PS+ AA AP P++ A AP P+K A AP ++ A APAPS K
Sbjct: 2783 SKPAAAPAPSKPAAAPAPSKPAA-APAPSKPAAAPAPSKPAAAPAPSKPAAAPAPS--KP 2839
Query: 378 VATSPSSDVAETPVDAPTASSPLASGPASGP-DAADAAAPS 259
A S A P + A++P S PA+ P + AAAP+
Sbjct: 2840 AAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPA 2880
Score = 57.8 bits (138), Expect = 9e-08
Identities = 41/101 (40%), Positives = 54/101 (52%), Gaps = 5/101 (4%)
Frame = -3
Query: 546 SKPIVFPGADKAS----PSQGAAKAPVPAQGAKAPVPAKGAKAPVAAQGAKAPAPSADKV 379
SKP P K + PS+ AA AP P++ A AP P+K A AP ++ A APAPS K
Sbjct: 2738 SKPAAAPAPSKPAAAPAPSKPAA-APAPSKPAAAPAPSKPAAAPAPSKPAAAPAPS--KP 2794
Query: 378 VATSPSSDVAETPVDAPTASSPLASGPASGP-DAADAAAPS 259
A S A P + A++P S PA+ P + AAAP+
Sbjct: 2795 AAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPA 2835
Score = 57.8 bits (138), Expect = 9e-08
Identities = 41/101 (40%), Positives = 54/101 (52%), Gaps = 5/101 (4%)
Frame = -3
Query: 546 SKPIVFPGADKAS----PSQGAAKAPVPAQGAKAPVPAKGAKAPVAAQGAKAPAPSADKV 379
SKP P K + PS+ AA AP P++ A AP P+K A AP ++ A APAPS K
Sbjct: 2720 SKPAAAPAPSKPAAAPAPSKPAA-APAPSKPAAAPAPSKPAAAPAPSKPAAAPAPS--KP 2776
Query: 378 VATSPSSDVAETPVDAPTASSPLASGPASGP-DAADAAAPS 259
A S A P + A++P S PA+ P + AAAP+
Sbjct: 2777 AAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPA 2817
Score = 57.8 bits (138), Expect = 9e-08
Identities = 41/101 (40%), Positives = 54/101 (52%), Gaps = 5/101 (4%)
Frame = -3
Query: 546 SKPIVFPGADKAS----PSQGAAKAPVPAQGAKAPVPAKGAKAPVAAQGAKAPAPSADKV 379
SKP P K + PS+ AA AP P++ A AP P+K A AP ++ A APAPS K
Sbjct: 2774 SKPAAAPAPSKPAAAPAPSKPAA-APAPSKPAAAPAPSKPAAAPAPSKPAAAPAPS--KP 2830
Query: 378 VATSPSSDVAETPVDAPTASSPLASGPASGP-DAADAAAPS 259
A S A P + A++P S PA+ P + AAAP+
Sbjct: 2831 AAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPA 2871
Score = 57.8 bits (138), Expect = 9e-08
Identities = 41/101 (40%), Positives = 54/101 (52%), Gaps = 5/101 (4%)
Frame = -3
Query: 546 SKPIVFPGADKAS----PSQGAAKAPVPAQGAKAPVPAKGAKAPVAAQGAKAPAPSADKV 379
SKP P K + PS+ AA AP P++ A AP P+K A AP ++ A APAPS K
Sbjct: 2747 SKPAAAPAPSKPAAAPAPSKPAA-APAPSKPAAAPAPSKPAAAPAPSKPAAAPAPS--KP 2803
Query: 378 VATSPSSDVAETPVDAPTASSPLASGPASGP-DAADAAAPS 259
A S A P + A++P S PA+ P + AAAP+
Sbjct: 2804 AAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPA 2844
Score = 54.7 bits (130), Expect = 8e-07
Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Frame = -3
Query: 510 SPSQGAAKAPVPAQGAKAPVPAKGAKAPVAAQGAKAPAPSADKVVATSPSSDVAETPVDA 331
+PS+ AA AP P++ A AP P+K A AP ++ A APAPS K A S A P +
Sbjct: 2718 APSKPAA-APAPSKPAAAPAPSKPAAAPAPSKPAAAPAPS--KPAAAPAPSKPAAAPAPS 2774
Query: 330 PTASSPLASGPASGP-DAADAAAPS 259
A++P S PA+ P + AAAP+
Sbjct: 2775 KPAAAPAPSKPAAAPAPSKPAAAPA 2799
Score = 49.7 bits (117), Expect = 2e-05
Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = -3
Query: 507 PSQGAAKAPVPAQGAKAPVPAKGAKAPVAAQGAKAPAPSADKVVATSPSSDVAETPVDAP 328
P A P++ A AP P+K A AP ++ A APAPS K A S A P +
Sbjct: 2709 PDPNEALLTAPSKPAAAPAPSKPAAAPAPSKPAAAPAPS--KPAAAPAPSKPAAAPAPSK 2766
Query: 327 TASSPLASGPASGP-DAADAAAPS 259
A++P S PA+ P + AAAP+
Sbjct: 2767 PAAAPAPSKPAAAPAPSKPAAAPA 2790
Score = 34.7 bits (78), Expect = 0.81
Identities = 33/104 (31%), Positives = 43/104 (40%)
Frame = +2
Query: 215 ITAPTKPTLVVLEALEGAAASAASGPEAGPEANGLDAVGASTGVSATSLEGDVATTLSAE 394
+TAP+KP + + AAA A S P A P + A A + +A A A
Sbjct: 2716 LTAPSKPAAAPAPS-KPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAA-PAP 2773
Query: 395 GAGALAPCAATGALAPLAGTGALAPCAGTGALAAPCEGEALSAP 526
A AP + A AP A AP A AAP + +AP
Sbjct: 2774 SKPAAAPAPSKPAAAPAPSKPAAAPAPSKPA-AAPAPSKPAAAP 2816
Score = 34.3 bits (77), Expect = 1.1
Identities = 36/112 (32%), Positives = 46/112 (40%), Gaps = 3/112 (2%)
Frame = +2
Query: 212 AITAPTKPTLVVLEALEGAAASAASGPEAGPEANGLDAVGA-STGVSATSLEGDVATTLS 388
A AP+KP + + AAA A S P A P + A A S +A + A
Sbjct: 2805 AAPAPSKPAAAPAPS-KPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAP 2863
Query: 389 AEGAGALAPCAATGALAPLAGTGALAPC--AGTGALAAPCEGEALSAPGNTI 538
++ A A AP A AP A AP A A + P A S P NT+
Sbjct: 2864 SKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPQNTL 2915
Score = 34.3 bits (77), Expect = 1.1
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Frame = -3
Query: 546 SKPIVFPGADKAS----PSQGAAKAPVPAQGAKAPVPAKGAKAPVAAQGAKAPAPSADKV 379
SKP P K + PS+ AA AP P++ A AP P+K A AP ++ P + +
Sbjct: 2864 SKPAAAPAPSKPAAAPAPSKPAA-APAPSKPAAAPAPSKPAAAPAPSK----PQNTLVAI 2918
Query: 378 VATSPSSDVAE 346
VA + D A+
Sbjct: 2919 VAKDQAKDQAK 2929
Score = 34.3 bits (77), Expect = 1.1
Identities = 34/112 (30%), Positives = 45/112 (39%)
Frame = +2
Query: 191 TTKTEAKAITAPTKPTLVVLEALEGAAASAASGPEAGPEANGLDAVGASTGVSATSLEGD 370
T ++ A AP+KP + + AAA A S P A P + A A + +A
Sbjct: 2717 TAPSKPAAAPAPSKPAAAPAPS-KPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSK 2775
Query: 371 VATTLSAEGAGALAPCAATGALAPLAGTGALAPCAGTGALAAPCEGEALSAP 526
A A A AP + A AP A AP A AAP + +AP
Sbjct: 2776 PAAA-PAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPA-AAPAPSKPAAAP 2825
Score = 32.7 bits (73), Expect = 3.1
Identities = 33/105 (31%), Positives = 42/105 (39%)
Frame = +2
Query: 212 AITAPTKPTLVVLEALEGAAASAASGPEAGPEANGLDAVGASTGVSATSLEGDVATTLSA 391
A AP+KP + + AAA A S P A P + A A + +A A A
Sbjct: 2778 AAPAPSKPAAAPAPS-KPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAA-PA 2835
Query: 392 EGAGALAPCAATGALAPLAGTGALAPCAGTGALAAPCEGEALSAP 526
A AP + A AP A AP A AAP + +AP
Sbjct: 2836 PSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPA-AAPAPSKPAAAP 2879
Score = 32.7 bits (73), Expect = 3.1
Identities = 33/105 (31%), Positives = 42/105 (39%)
Frame = +2
Query: 212 AITAPTKPTLVVLEALEGAAASAASGPEAGPEANGLDAVGASTGVSATSLEGDVATTLSA 391
A AP+KP + + AAA A S P A P + A A + +A A A
Sbjct: 2769 AAPAPSKPAAAPAPS-KPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAA-PA 2826
Query: 392 EGAGALAPCAATGALAPLAGTGALAPCAGTGALAAPCEGEALSAP 526
A AP + A AP A AP A AAP + +AP
Sbjct: 2827 PSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPA-AAPAPSKPAAAP 2870
Score = 32.7 bits (73), Expect = 3.1
Identities = 33/105 (31%), Positives = 42/105 (39%)
Frame = +2
Query: 212 AITAPTKPTLVVLEALEGAAASAASGPEAGPEANGLDAVGASTGVSATSLEGDVATTLSA 391
A AP+KP + + AAA A S P A P + A A + +A A A
Sbjct: 2742 AAPAPSKPAAAPAPS-KPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAA-PA 2799
Query: 392 EGAGALAPCAATGALAPLAGTGALAPCAGTGALAAPCEGEALSAP 526
A AP + A AP A AP A AAP + +AP
Sbjct: 2800 PSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPA-AAPAPSKPAAAP 2843
Score = 32.7 bits (73), Expect = 3.1
Identities = 33/105 (31%), Positives = 42/105 (39%)
Frame = +2
Query: 212 AITAPTKPTLVVLEALEGAAASAASGPEAGPEANGLDAVGASTGVSATSLEGDVATTLSA 391
A AP+KP + + AAA A S P A P + A A + +A A A
Sbjct: 2760 AAPAPSKPAAAPAPS-KPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAA-PA 2817
Query: 392 EGAGALAPCAATGALAPLAGTGALAPCAGTGALAAPCEGEALSAP 526
A AP + A AP A AP A AAP + +AP
Sbjct: 2818 PSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPA-AAPAPSKPAAAP 2861
Score = 32.7 bits (73), Expect = 3.1
Identities = 33/105 (31%), Positives = 42/105 (39%)
Frame = +2
Query: 212 AITAPTKPTLVVLEALEGAAASAASGPEAGPEANGLDAVGASTGVSATSLEGDVATTLSA 391
A AP+KP + + AAA A S P A P + A A + +A A A
Sbjct: 2796 AAPAPSKPAAAPAPS-KPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAA-PA 2853
Query: 392 EGAGALAPCAATGALAPLAGTGALAPCAGTGALAAPCEGEALSAP 526
A AP + A AP A AP A AAP + +AP
Sbjct: 2854 PSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPA-AAPAPSKPAAAP 2897
Score = 32.7 bits (73), Expect = 3.1
Identities = 33/105 (31%), Positives = 42/105 (39%)
Frame = +2
Query: 212 AITAPTKPTLVVLEALEGAAASAASGPEAGPEANGLDAVGASTGVSATSLEGDVATTLSA 391
A AP+KP + + AAA A S P A P + A A + +A A A
Sbjct: 2787 AAPAPSKPAAAPAPS-KPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAA-PA 2844
Query: 392 EGAGALAPCAATGALAPLAGTGALAPCAGTGALAAPCEGEALSAP 526
A AP + A AP A AP A AAP + +AP
Sbjct: 2845 PSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPA-AAPAPSKPAAAP 2888
Score = 32.7 bits (73), Expect = 3.1
Identities = 33/105 (31%), Positives = 42/105 (39%)
Frame = +2
Query: 212 AITAPTKPTLVVLEALEGAAASAASGPEAGPEANGLDAVGASTGVSATSLEGDVATTLSA 391
A AP+KP + + AAA A S P A P + A A + +A A A
Sbjct: 2751 AAPAPSKPAAAPAPS-KPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAA-PA 2808
Query: 392 EGAGALAPCAATGALAPLAGTGALAPCAGTGALAAPCEGEALSAP 526
A AP + A AP A AP A AAP + +AP
Sbjct: 2809 PSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPA-AAPAPSKPAAAP 2852
Score = 32.7 bits (73), Expect = 3.1
Identities = 33/105 (31%), Positives = 42/105 (39%)
Frame = +2
Query: 212 AITAPTKPTLVVLEALEGAAASAASGPEAGPEANGLDAVGASTGVSATSLEGDVATTLSA 391
A AP+KP + + AAA A S P A P + A A + +A A A
Sbjct: 2733 AAPAPSKPAAAPAPS-KPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPAAA-PA 2790
Query: 392 EGAGALAPCAATGALAPLAGTGALAPCAGTGALAAPCEGEALSAP 526
A AP + A AP A AP A AAP + +AP
Sbjct: 2791 PSKPAAAPAPSKPAAAPAPSKPAAAPAPSKPA-AAPAPSKPAAAP 2834
>pir||A46194 neurofilament protein NF-220, high-molecular-weight splice form -
longfin squid gi|161292|gb|AAA29991.1| neurofilament
protein
Length = 1200
Score = 56.2 bits (134), Expect = 3e-07
Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Frame = -3
Query: 546 SKPIVFPGADKASPSQGAAKAPVPAQGAKAPVPA------KGAKAPVAAQGAKAPAPSAD 385
S+ + P + S S+ +A++PV ++ K+PVP+ K AK+PVA++ AK+P PS
Sbjct: 1048 SEHVKSPVPSEKSESEKSARSPVTSEHVKSPVPSEKAESEKSAKSPVASEPAKSPIPSEK 1107
Query: 384 KVVATSPSSDVAETPVDAPTASSPLASGPASGPDAADAAAPSSASS 247
S S V +P AS SG + P A++ A + S
Sbjct: 1108 AESEKSAKSPVTSEHATSPVASEKSESGKSKSPAASEKAESEKSKS 1153
Score = 48.9 bits (115), Expect = 4e-05
Identities = 31/110 (28%), Positives = 54/110 (48%), Gaps = 16/110 (14%)
Frame = -3
Query: 528 PGADKASPSQGAAKAPVPAQGAKAPVPA------KGAKAPVAAQGAKAPAPSADKVVATS 367
P + + S+ +A++PV ++ K+PVP+ K A++PV ++ K+P PS S
Sbjct: 1030 PVPSEKAESEKSARSPVTSEHVKSPVPSEKSESEKSARSPVTSEHVKSPVPSEKAESEKS 1089
Query: 366 PSSDVAETPVDAP----------TASSPLASGPASGPDAADAAAPSSASS 247
S VA P +P +A SP+ S A+ P A++ + + S
Sbjct: 1090 AKSPVASEPAKSPIPSEKAESEKSAKSPVTSEHATSPVASEKSESGKSKS 1139
Score = 45.8 bits (107), Expect = 4e-04
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 10/99 (10%)
Frame = -3
Query: 510 SPSQGAAKAPVPAQGAKAPVPAKGAKAPVAAQGAKAPAPSADKVVATSPSSDVAETPVDA 331
SP+ A++PVP++ A++ K A++PV ++ K+P PS S S V V +
Sbjct: 1021 SPTSDQARSPVPSEKAESE---KSARSPVTSEHVKSPVPSEKSESEKSARSPVTSEHVKS 1077
Query: 330 P----------TASSPLASGPASGPDAADAAAPSSASST 244
P +A SP+AS PA P ++ A ++ +
Sbjct: 1078 PVPSEKAESEKSAKSPVASEPAKSPIPSEKAESEKSAKS 1116
Score = 45.1 bits (105), Expect = 6e-04
Identities = 30/104 (28%), Positives = 57/104 (53%), Gaps = 9/104 (8%)
Frame = -3
Query: 522 ADKASPSQGAAKAPVPAQ------GAKAPVPAKGAKAPVAAQGAKAPAPSA---DKVVAT 370
++KA+ S+ +A++PVP++ A++PVP++ A++ + A++P PS + A
Sbjct: 964 SEKAAESEKSARSPVPSEKAESEKSARSPVPSEKAESE---KSARSPVPSEKDESEKSAK 1020
Query: 369 SPSSDVAETPVDAPTASSPLASGPASGPDAADAAAPSSASSTTK 238
SP+SD A +PV + A S ++ + + PS S + K
Sbjct: 1021 SPTSDQARSPVPSEKAESEKSARSPVTSEHVKSPVPSEKSESEK 1064
Score = 43.1 bits (100), Expect = 0.002
Identities = 29/112 (25%), Positives = 53/112 (46%), Gaps = 14/112 (12%)
Frame = -3
Query: 546 SKPIVFPGADKASPSQGAAKAPVPAQGAKAPVPA------KGAKAPVAAQGAKAPAPSAD 385
S+ + P + + S+ +AK+PV ++ AK+P+P+ K AK+PV ++ A +P S
Sbjct: 1072 SEHVKSPVPSEKAESEKSAKSPVASEPAKSPIPSEKAESEKSAKSPVTSEHATSPVASEK 1131
Query: 384 KVVATSPS--------SDVAETPVDAPTASSPLASGPASGPDAADAAAPSSA 253
S S S+ +++PV + S A P S + +S+
Sbjct: 1132 SESGKSKSPAASEKAESEKSKSPVPSEKEGSKTAGSPGSSDEGITTTTTTSS 1183
Score = 40.0 bits (92), Expect = 0.019
Identities = 30/84 (35%), Positives = 43/84 (50%), Gaps = 9/84 (10%)
Frame = -3
Query: 510 SPSQGAAKAPVPAQGAKAPVPAKGA----KAPVAAQGAKAPAPSADKVVA-----TSPSS 358
S S+ +AK+PV ++ K+PV K A K+PV ++ A +P S V + TS S
Sbjct: 721 SGSEKSAKSPVRSEATKSPVSEKSAGSKSKSPVPSERALSPVLSEMSVHSTAMSHTSRSP 780
Query: 357 DVAETPVDAPTASSPLASGPASGP 286
+E V +PT S AS A P
Sbjct: 781 TASEKSVKSPTHSERTASPTAKSP 804
Score = 40.0 bits (92), Expect = 0.019
Identities = 35/126 (27%), Positives = 58/126 (45%), Gaps = 22/126 (17%)
Frame = -3
Query: 549 VSKPIVFPGADKASP-----SQGAAKAPVPAQ------GAKAPVPA------KGAKAPVA 421
+ PI F A+ S K+PVP++ A++PVP+ K A++PV
Sbjct: 895 IKSPIDFEKAESEKSALSYKSSDHDKSPVPSEKAESEKSARSPVPSEKAESEKSARSPVT 954
Query: 420 AQGAKAPAPS-----ADKVVATSPSSDVAETPVDAPTASSPLASGPASGPDAADAAAPSS 256
++ AK+P PS ++K + S+ AE+ +A SP+ S A +A + PS
Sbjct: 955 SEPAKSPVPSEKAAESEKSARSPVPSEKAES---EKSARSPVPSEKAESEKSARSPVPSE 1011
Query: 255 ASSTTK 238
+ K
Sbjct: 1012 KDESEK 1017
Score = 38.9 bits (89), Expect = 0.043
Identities = 25/96 (26%), Positives = 48/96 (49%), Gaps = 6/96 (6%)
Frame = -3
Query: 489 KAPVPAQ------GAKAPVPAKGAKAPVAAQGAKAPAPSADKVVATSPSSDVAETPVDAP 328
K+PVP++ AK+PV ++ AK+P+ ++ A++ + V + +S VA ++
Sbjct: 1076 KSPVPSEKAESEKSAKSPVASEPAKSPIPSEKAESEKSAKSPVTSEHATSPVASEKSESG 1135
Query: 327 TASSPLASGPASGPDAADAAAPSSASSTTKVGLVGA 220
+ SP AS A + + + PS + G G+
Sbjct: 1136 KSKSPAASEKAES-EKSKSPVPSEKEGSKTAGSPGS 1170
Score = 35.0 bits (79), Expect = 0.62
Identities = 21/84 (25%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Frame = -3
Query: 504 SQGAAKAPVPAQGAKAPVPAKGAKAPVAAQGAKAPAPSADKVVATSPSSDV--AETPVDA 331
S+ + K+P ++ +P AK+P+ + AK+P ++K ++ S V ++ + +
Sbjct: 783 SEKSVKSPTHSERTASPT----AKSPIIMEPAKSPKDESEKELSPERSESVMSGKSQITS 838
Query: 330 PTASSPLASGPASGPDAADAAAPS 259
+A SP+ S A +A + PS
Sbjct: 839 SSAKSPVPSEKADSEKSATSPTPS 862
Score = 34.3 bits (77), Expect = 1.1
Identities = 28/95 (29%), Positives = 45/95 (46%), Gaps = 15/95 (15%)
Frame = -3
Query: 525 GADKASPS---QGAAKAPVPAQGA----KAPVPAKGAKAPV--------AAQGAKAPAPS 391
G++K++ S A K+PV + A K+PVP++ A +PV A + +P+
Sbjct: 722 GSEKSAKSPVRSEATKSPVSEKSAGSKSKSPVPSERALSPVLSEMSVHSTAMSHTSRSPT 781
Query: 390 ADKVVATSPSSDVAETPVDAPTASSPLASGPASGP 286
A + SP+ +PTA SP+ PA P
Sbjct: 782 ASEKSVKSPTHSERTA---SPTAKSPIIMEPAKSP 813
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 492,120,811
Number of Sequences: 1393205
Number of extensions: 11820006
Number of successful extensions: 109388
Number of sequences better than 10.0: 3934
Number of HSP's better than 10.0 without gapping: 67043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 95127
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 19808345223
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
