Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC021375A_C01 KMC021375A_c01
(495 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_179899.1| cytochrome P450, putative; protein id: At2g2318... 127 5e-29
dbj|BAA99522.1| putative cytochrome P450 [Oryza sativa (japonica... 127 7e-29
ref|NP_195658.1| cytochrome P450 - like protein; protein id: At4... 125 3e-28
ref|NP_195659.1| cytochrome P450 - like protein; protein id: At4... 124 4e-28
ref|NP_176086.1| cytochrome P450, putative; protein id: At1g5775... 122 3e-27
>ref|NP_179899.1| cytochrome P450, putative; protein id: At2g23180.1, supported by
cDNA: gi_13877660 [Arabidopsis thaliana]
gi|7430715|pir||T00514 cytochrome P450 homolog T20D16.19
- Arabidopsis thaliana gi|2642443|gb|AAB87111.1|
putative cytochrome P450 [Arabidopsis thaliana]
gi|13877661|gb|AAK43908.1|AF370589_1 putative cytochrome
P450 [Arabidopsis thaliana] gi|26450509|dbj|BAC42368.1|
putative cytochrome P450 [Arabidopsis thaliana]
Length = 516
Score = 127 bits (320), Expect = 5e-29
Identities = 55/98 (56%), Positives = 74/98 (75%)
Frame = -3
Query: 493 GRSEDVWGKDCLEFKPERWVSERGSIVHAPSYKFISFNAGPRTCLGKDLSFIQLKIIATA 314
GR + VWG+D EFKPERW+SE G ++H PS+KF+SFNAGPRTCLGK+++ Q+K +A
Sbjct: 417 GRMKSVWGEDASEFKPERWISESGRLIHVPSFKFLSFNAGPRTCLGKEVAMTQMKTVAVK 476
Query: 313 VLRNYRVHPVEGHAAIPNFSIVLLMQDGLKVRITKREN 200
+++NY + VEGH P SI+L M+ GLKV +TKR N
Sbjct: 477 IIQNYEIKVVEGHKIEPVPSIILHMKHGLKVTVTKRSN 514
>dbj|BAA99522.1| putative cytochrome P450 [Oryza sativa (japonica cultivar-group)]
Length = 510
Score = 127 bits (319), Expect = 7e-29
Identities = 53/97 (54%), Positives = 74/97 (75%)
Frame = -3
Query: 493 GRSEDVWGKDCLEFKPERWVSERGSIVHAPSYKFISFNAGPRTCLGKDLSFIQLKIIATA 314
GR E +WGKDC+EFKPERWVS+ G + H PSYKF+SFN GPR+CLGK+LS +KII +
Sbjct: 412 GRIEGIWGKDCMEFKPERWVSKSGRLRHEPSYKFLSFNTGPRSCLGKELSLSNMKIIVAS 471
Query: 313 VLRNYRVHPVEGHAAIPNFSIVLLMQDGLKVRITKRE 203
++ N++V VEGH +P S++L Q+G+ VR+ +R+
Sbjct: 472 IIHNFKVELVEGHEVMPQSSVILHTQNGMMVRLKRRD 508
>ref|NP_195658.1| cytochrome P450 - like protein; protein id: At4g39480.1
[Arabidopsis thaliana] gi|7430717|pir||T09364 cytochrome
P450 homolog F23K16.110 - Arabidopsis thaliana
gi|5042164|emb|CAB44683.1| cytochrome P450-like protein
[Arabidopsis thaliana] gi|7270932|emb|CAB80611.1|
cytochrome P450-like protein [Arabidopsis thaliana]
Length = 516
Score = 125 bits (314), Expect = 3e-28
Identities = 54/96 (56%), Positives = 74/96 (76%)
Frame = -3
Query: 493 GRSEDVWGKDCLEFKPERWVSERGSIVHAPSYKFISFNAGPRTCLGKDLSFIQLKIIATA 314
GR + VWG+D +EFKPERW+SE G VH PSYKF+SFNAGPRTCLGK+++ Q+K +A
Sbjct: 418 GRMKSVWGEDAMEFKPERWISESGRSVHEPSYKFLSFNAGPRTCLGKEVAMTQMKTVAVK 477
Query: 313 VLRNYRVHPVEGHAAIPNFSIVLLMQDGLKVRITKR 206
+++NY ++ VEGH P S++L M+ GLKV ++KR
Sbjct: 478 IIQNYDINVVEGHKIKPAPSVILHMKHGLKVTVSKR 513
>ref|NP_195659.1| cytochrome P450 - like protein; protein id: At4g39490.1
[Arabidopsis thaliana] gi|7430718|pir||T09365 cytochrome
P450 homolog F23K16.120 - Arabidopsis thaliana
gi|5042165|emb|CAB44684.1| cytochrome P450-like protein
[Arabidopsis thaliana] gi|7270933|emb|CAB80612.1|
cytochrome P450-like protein [Arabidopsis thaliana]
Length = 479
Score = 124 bits (312), Expect = 4e-28
Identities = 55/96 (57%), Positives = 74/96 (76%)
Frame = -3
Query: 493 GRSEDVWGKDCLEFKPERWVSERGSIVHAPSYKFISFNAGPRTCLGKDLSFIQLKIIATA 314
GR + VWG+D LEFKPERW+SE G+ VH PSYKF+SFNAGPRTCLGK+++ +Q+K +A
Sbjct: 381 GRMKSVWGEDALEFKPERWISESGNSVHEPSYKFLSFNAGPRTCLGKEVAMMQMKSVAVK 440
Query: 313 VLRNYRVHPVEGHAAIPNFSIVLLMQDGLKVRITKR 206
+++NY + VEG P S++L M+ GLKV +TKR
Sbjct: 441 IIQNYEMKIVEGQQIEPAPSVILHMKHGLKVTVTKR 476
>ref|NP_176086.1| cytochrome P450, putative; protein id: At1g57750.1, supported by
cDNA: gi_16930512, supported by cDNA: gi_20259329
[Arabidopsis thaliana] gi|25282624|pir||G96611 probable
cytochrome P450 T8L23.21 [imported] - Arabidopsis
thaliana gi|12321341|gb|AAG50737.1|AC079733_5 cytochrome
P450, putative [Arabidopsis thaliana]
gi|16930513|gb|AAL31942.1|AF419610_1 At1g57750/T8L23_21
[Arabidopsis thaliana] gi|20259330|gb|AAM13991.1|
putative cytochrome P450 [Arabidopsis thaliana]
gi|29028732|gb|AAO64745.1| At1g57750/T8L23_21
[Arabidopsis thaliana]
Length = 497
Score = 122 bits (305), Expect = 3e-27
Identities = 52/96 (54%), Positives = 73/96 (75%)
Frame = -3
Query: 493 GRSEDVWGKDCLEFKPERWVSERGSIVHAPSYKFISFNAGPRTCLGKDLSFIQLKIIATA 314
GR VWG+D L+FKPERW+S+ G + H PSYKF++FN+GPRTCLGK+L+ +Q+K++A
Sbjct: 401 GRMRSVWGEDALDFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKNLALLQMKMVALE 460
Query: 313 VLRNYRVHPVEGHAAIPNFSIVLLMQDGLKVRITKR 206
++RNY +EGH P SI+L M+ GLKV +TK+
Sbjct: 461 IIRNYDFKVIEGHKVEPIPSILLRMKHGLKVTVTKK 496
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 406,425,309
Number of Sequences: 1393205
Number of extensions: 8162581
Number of successful extensions: 23137
Number of sequences better than 10.0: 1513
Number of HSP's better than 10.0 without gapping: 22240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22833
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 14493193850
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
