Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC021252A_C01 KMC021252A_c01
(600 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||S44168 dnaK-type molecular chaperone HSC71.0 - garden pea g... 392 e-108
pir||T45522 heat shock protein HSC70-1, cytosolic [imported] - s... 390 e-108
dbj|BAA34919.1| heat shock protein 70 cognate [Salix gilgiana] 390 e-108
gb|AAM48131.1|AF509336_1 heat shock protein 70 [Saussurea medusa] 390 e-108
emb|CAB72130.1| heat shock protein 70 [Cucumis sativus] 389 e-107
>pir||S44168 dnaK-type molecular chaperone HSC71.0 - garden pea
gi|473217|emb|CAA83548.1| PsHSC71.0 [Pisum sativum]
Length = 647
Score = 392 bits (1008), Expect = e-108
Identities = 195/199 (97%), Positives = 198/199 (98%)
Frame = +2
Query: 2 EGIDFYSPITRARFEEMNMDLFRKCMEPVEKCLRDAKMDKRSVHDVVLVGGSTRIPKVQQ 181
EGIDFYSPITRARFEE+NMDLFRKCMEPVEKCLRDAKMDK+S+HDVVLVGGSTRIPKVQQ
Sbjct: 294 EGIDFYSPITRARFEELNMDLFRKCMEPVEKCLRDAKMDKKSIHDVVLVGGSTRIPKVQQ 353
Query: 182 LLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGG 361
LLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGG
Sbjct: 354 LLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGG 413
Query: 362 VMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERTRTRDNNLLGKFELSGIPPAP 541
VMTVLI RNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERTRTRDNNLLGKFELSGIPPAP
Sbjct: 414 VMTVLIQRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERTRTRDNNLLGKFELSGIPPAP 473
Query: 542 RGVPQITVCFDIDANGILN 598
RGVPQITVCFDIDANGILN
Sbjct: 474 RGVPQITVCFDIDANGILN 492
>pir||T45522 heat shock protein HSC70-1, cytosolic [imported] - spinach
gi|425194|gb|AAA62445.1| heat shock protein
gi|2660772|gb|AAB88134.1| cytosolic heat shock 70
protein [Spinacia oleracea]
Length = 647
Score = 390 bits (1002), Expect = e-108
Identities = 193/199 (96%), Positives = 197/199 (98%)
Frame = +2
Query: 2 EGIDFYSPITRARFEEMNMDLFRKCMEPVEKCLRDAKMDKRSVHDVVLVGGSTRIPKVQQ 181
EG+DFYSPITRARFEE+NMDLFRKCMEPVEKCLRDAKMDK +VHDVVLVGGSTRIPKVQQ
Sbjct: 295 EGVDFYSPITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQ 354
Query: 182 LLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGG 361
LLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGG
Sbjct: 355 LLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGG 414
Query: 362 VMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERTRTRDNNLLGKFELSGIPPAP 541
VMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQV+EGERTRTRDNNLLGKFELSGIPPAP
Sbjct: 415 VMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAP 474
Query: 542 RGVPQITVCFDIDANGILN 598
RGVPQI VCFDIDANGILN
Sbjct: 475 RGVPQINVCFDIDANGILN 493
>dbj|BAA34919.1| heat shock protein 70 cognate [Salix gilgiana]
Length = 408
Score = 390 bits (1002), Expect = e-108
Identities = 195/199 (97%), Positives = 196/199 (97%)
Frame = +2
Query: 2 EGIDFYSPITRARFEEMNMDLFRKCMEPVEKCLRDAKMDKRSVHDVVLVGGSTRIPKVQQ 181
EGIDFYS ITRARFEEMNMDLFRKCMEPVEKCLRDAKMDK SVHD VLVGGSTRIPKVQQ
Sbjct: 55 EGIDFYSTITRARFEEMNMDLFRKCMEPVEKCLRDAKMDKSSVHDAVLVGGSTRIPKVQQ 114
Query: 182 LLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGG 361
LLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGG
Sbjct: 115 LLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGG 174
Query: 362 VMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERTRTRDNNLLGKFELSGIPPAP 541
VMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQV+EGERTRTRDNNLLGKFELSGIPPAP
Sbjct: 175 VMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAP 234
Query: 542 RGVPQITVCFDIDANGILN 598
RGVPQITVCFDIDANGILN
Sbjct: 235 RGVPQITVCFDIDANGILN 253
>gb|AAM48131.1|AF509336_1 heat shock protein 70 [Saussurea medusa]
Length = 647
Score = 390 bits (1001), Expect = e-108
Identities = 193/199 (96%), Positives = 197/199 (98%)
Frame = +2
Query: 2 EGIDFYSPITRARFEEMNMDLFRKCMEPVEKCLRDAKMDKRSVHDVVLVGGSTRIPKVQQ 181
EG+DFYS ITRARFEE+NMDLFRKCMEPVEKCLRDAKMDK S+HDVVLVGGSTRIPKVQQ
Sbjct: 295 EGVDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSIHDVVLVGGSTRIPKVQQ 354
Query: 182 LLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGG 361
LLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGG
Sbjct: 355 LLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGG 414
Query: 362 VMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERTRTRDNNLLGKFELSGIPPAP 541
VMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQV+EGERTRTRDNNLLGKFELSGIPPAP
Sbjct: 415 VMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAP 474
Query: 542 RGVPQITVCFDIDANGILN 598
RGVPQITVCFDIDANGILN
Sbjct: 475 RGVPQITVCFDIDANGILN 493
>emb|CAB72130.1| heat shock protein 70 [Cucumis sativus]
Length = 647
Score = 389 bits (1000), Expect = e-107
Identities = 194/199 (97%), Positives = 197/199 (98%)
Frame = +2
Query: 2 EGIDFYSPITRARFEEMNMDLFRKCMEPVEKCLRDAKMDKRSVHDVVLVGGSTRIPKVQQ 181
EGIDFYS ITRARFEE+NMDLFRKCMEPVEKCLRDAKMDK +VHDVVLVGGSTRIPKVQQ
Sbjct: 295 EGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQ 354
Query: 182 LLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGG 361
LLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGG
Sbjct: 355 LLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGG 414
Query: 362 VMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERTRTRDNNLLGKFELSGIPPAP 541
VMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQV+EGERTRTRDNNLLGKFELSGIPPAP
Sbjct: 415 VMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAP 474
Query: 542 RGVPQITVCFDIDANGILN 598
RGVPQITVCFDIDANGILN
Sbjct: 475 RGVPQITVCFDIDANGILN 493
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 551,420,750
Number of Sequences: 1393205
Number of extensions: 12298439
Number of successful extensions: 46675
Number of sequences better than 10.0: 1515
Number of HSP's better than 10.0 without gapping: 41624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44920
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23426109484
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
