KMC020548A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KMC020548A_C01 KMC020548A_c01
ccacaacctgtgcatatgcaatggcttagcatttgtttcatttcatcaaataggtgatgt
acataaagccaacagacatgAGAATCAACAAAGCACTAATATTCTATTCAAAAAACAAAA
CAAAACAAAACAAAGCACTAATATTCTACATCAAATTACCCAAGAGCAGTGAAATCCACA
AGCAATGCTCAATGGAAACAATACTTAGTGATGTGAGTGAAATATCCTTAAGAATTTATA
ATTTATAAGTCAACTATTTTAAATTATTCATTCAGTGACATAGCAGCTGATAAGAACTCA
TCAATGGCCCTAACAGAAGAACCCTTATAACCATCTTCATCTCTCACAGCGTCCCTTATC
ATCTCTCTGATGTTTCCAGCATTCTTCCTAATCTTCACTCCACTCTCAGCCTCATTCATC
ACCAATTCAATCTTCTCCACCAGATCCTCATGCCTAACCTCACACCTCTTCCCTCTCGCA
ACCTCCACACAAACACCAAGCTCTTCCTCCAACATCTTGCAGTTGAAAAATTGCTCCGCC
GCCATCGGCCACCCGAGAATCGGCACGCCGTGACTCAGCGATTCCAGCACCGAGTTCCAC
CCACAGTGACTCAGAAACGCGGAAACTGGCCCGTGTGACAGAATCTCCACCTGCGGTGCC
CAATCGTGAACCAACAACCCCTTCTTCGCAAnCCTCCCCAGAAACCCTTCCGGCAAACAT
TCTTCTGCTCGGAACTCCGAGTT


Nr search

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC020548A_C01 KMC020548A_c01
         (743 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_196793.1| glucosyltransferase -like protein; protein id: ...   187  2e-46
gb|AAL57638.1| AT5g12890/T24H18_60 [Arabidopsis thaliana]             182  3e-45
dbj|BAB68090.1| putative flavonol glucosyltransferase [Oryza sat...   117  2e-25
dbj|BAB86921.1| glucosyltransferase-3 [Vigna angularis]               115  9e-25
dbj|BAC43482.1| putative flavonol 3-O-glucosyltransferase [Arabi...   113  2e-24

>ref|NP_196793.1| glucosyltransferase -like protein; protein id: At5g12890.1,
           supported by cDNA: gi_18086350 [Arabidopsis thaliana]
           gi|11357301|pir||T49903 glucosyltransferase-like protein
           - Arabidopsis thaliana gi|7630045|emb|CAB88253.1|
           glucosyltransferase-like protein [Arabidopsis thaliana]
          Length = 488

 Score =  187 bits (474), Expect = 2e-46
 Identities = 94/156 (60%), Positives = 117/156 (74%), Gaps = 2/156 (1%)
 Frame = -1

Query: 740 SEFRAEECLPEGFLGRXAK--KGLLVHDWAPQVEILSHGPVSAFLSHCGWNSVLESLSHG 567
           SEF  +  LPEGF  R  +  +GLLV  WAPQV+ILSH     FLSHCGWNS+LESLSHG
Sbjct: 329 SEFDVKGYLPEGFEERITRSERGLLVKKWAPQVDILSHKATCVFLSHCGWNSILESLSHG 388

Query: 566 VPILGWPMAAEQFFNCKMLEEELGVCVEVARGKRCEVRHEDLVEKIELVMNEAESGVKIR 387
           VP+LGWPMAAEQFFN  ++E+ +GV VEVARGKRCE++ +D+V KI+LVM E E G +IR
Sbjct: 389 VPLLGWPMAAEQFFNSILMEKHIGVSVEVARGKRCEIKCDDIVSKIKLVMEETEVGKEIR 448

Query: 386 KNAGNIREMIRDAVRDEDGYKGSSVRAIDEFLSAAM 279
           K A  ++E++R A+   DG KGSSV  ++EFL  AM
Sbjct: 449 KKAREVKELVRRAM--VDGVKGSSVIGLEEFLDQAM 482

>gb|AAL57638.1| AT5g12890/T24H18_60 [Arabidopsis thaliana]
          Length = 488

 Score =  182 bits (463), Expect = 3e-45
 Identities = 92/156 (58%), Positives = 116/156 (73%), Gaps = 2/156 (1%)
 Frame = -1

Query: 740 SEFRAEECLPEGFLGRXAK--KGLLVHDWAPQVEILSHGPVSAFLSHCGWNSVLESLSHG 567
           SEF  +  LPEGF  R  +  +GLLV  WAPQV+ILSH     FLSHCGWNS+LESLSHG
Sbjct: 329 SEFDVKGYLPEGFEERITRSERGLLVKKWAPQVDILSHKATCVFLSHCGWNSILESLSHG 388

Query: 566 VPILGWPMAAEQFFNCKMLEEELGVCVEVARGKRCEVRHEDLVEKIELVMNEAESGVKIR 387
           VP+LGWPMAAEQFFN  ++E+ +GV VEVARGKRCE++ +D+V KI+L + E E G +IR
Sbjct: 389 VPLLGWPMAAEQFFNSILMEKHIGVSVEVARGKRCEIKCDDIVSKIKLGVEETEVGKEIR 448

Query: 386 KNAGNIREMIRDAVRDEDGYKGSSVRAIDEFLSAAM 279
           K A  ++E++R A+   DG KGSSV  ++EFL  AM
Sbjct: 449 KKAREVKELVRRAM--VDGVKGSSVIGLEEFLDQAM 482

>dbj|BAB68090.1| putative flavonol glucosyltransferase [Oryza sativa (japonica
           cultivar-group)]
          Length = 474

 Score =  117 bits (293), Expect = 2e-25
 Identities = 69/152 (45%), Positives = 93/152 (60%), Gaps = 2/152 (1%)
 Frame = -1

Query: 737 EFRAEECLPEGFLGRXAKKGLLVHDWAPQVEILSHGPVSAFLSHCGWNSVLESLSHGVPI 558
           E   E   PEGFL R   +G +V +WAPQ  +L HG V AF++HCGWNS LE++  GVP+
Sbjct: 312 EVDLEALFPEGFLERTQGRGFVVKNWAPQSAVLQHGAVGAFVTHCGWNSSLEAIMSGVPM 371

Query: 557 LGWPMAAEQFFNCKMLEEE--LGVCVEVARGKRCEVRHEDLVEKIELVMNEAESGVKIRK 384
           + WP+ AEQ  N   L EE  LGV VE   G+   V+ ++L  K+ LVM E+E G ++R+
Sbjct: 372 ICWPLYAEQRLNKAHLVEEMKLGVLVEGYDGEL--VKADELETKVRLVM-ESEEGKRLRE 428

Query: 383 NAGNIREMIRDAVRDEDGYKGSSVRAIDEFLS 288
            +   +EM  DAV+D     GSS  A  EFL+
Sbjct: 429 RSAMAKEMAADAVKD----GGSSDMAFAEFLN 456

>dbj|BAB86921.1| glucosyltransferase-3 [Vigna angularis]
          Length = 474

 Score =  115 bits (287), Expect = 9e-25
 Identities = 61/145 (42%), Positives = 94/145 (64%)
 Frame = -1

Query: 725 EECLPEGFLGRXAKKGLLVHDWAPQVEILSHGPVSAFLSHCGWNSVLESLSHGVPILGWP 546
           +E LPEGFL R  +KG++V DWAPQ EIL+H  V  F++HCGWNSVLE +  GVP++ WP
Sbjct: 329 DELLPEGFLERTKEKGMVVRDWAPQAEILNHESVGGFVTHCGWNSVLEGVWEGVPMVAWP 388

Query: 545 MAAEQFFNCKMLEEELGVCVEVARGKRCEVRHEDLVEKIELVMNEAESGVKIRKNAGNIR 366
           + AEQ  N  +L EE+ V + V R K   V   +L E+++ +M +++ G +IR+    ++
Sbjct: 389 LYAEQKLNRVILVEEMKVGLGVERNKEGLVSSTELGERVKELM-DSDRGKEIRQRMFKMK 447

Query: 365 EMIRDAVRDEDGYKGSSVRAIDEFL 291
              ++A+ +     GSSV A++E +
Sbjct: 448 ISAKEAMSE----GGSSVVALNELV 468

>dbj|BAC43482.1| putative flavonol 3-O-glucosyltransferase [Arabidopsis thaliana]
          Length = 380

 Score =  113 bits (283), Expect = 2e-24
 Identities = 61/121 (50%), Positives = 78/121 (64%), Gaps = 4/121 (3%)
 Frame = -1

Query: 716 LPEGFLGRXAKKGLLVHDWAPQVEILSHGPVSAFLSHCGWNSVLESLSHGVPILGWPMAA 537
           LPEGFL R    GL+V  WAPQVEILSH  +  FLSHCGW+SVLESL+ GVPI+ WP+ A
Sbjct: 234 LPEGFLDRTRGVGLVVTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIIAWPLYA 293

Query: 536 EQFFNCKMLEEELGVCVEVAR--GKRCEVRHE--DLVEKIELVMNEAESGVKIRKNAGNI 369
           EQ+ N  +L EE+G+ +  +    K+   R E   LV+KI  V  E + G KI+  A  +
Sbjct: 294 EQWMNATLLTEEIGMAIRTSELPSKKVISREEVASLVKKI--VAEEDKEGRKIKTKAEEV 351

Query: 368 R 366
           R
Sbjct: 352 R 352

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 648,731,329
Number of Sequences: 1393205
Number of extensions: 15105260
Number of successful extensions: 73092
Number of sequences better than 10.0: 1664
Number of HSP's better than 10.0 without gapping: 57821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 68598
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 35751090169
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)


EST assemble image


clone accession position
1 MF009b03_f BP028678 1 504
2 MF057h08_f BP031324 213 726
3 MF076a07_f BP032307 226 743




Lotus japonicus
Kazusa DNA Research Institute