Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC020521A_C01 KMC020521A_c01
(515 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC61852.1| putative monosaccharide transporter 1 [Petunia x ... 142 2e-33
ref|NP_193879.1| glucose transporter; protein id: At4g21480.1 [A... 142 2e-33
ref|NP_188627.1| monosaccharide transport protein, STP4; protein... 142 3e-33
dbj|BAB19864.1| monosaccharide transporter 3 [Oryza sativa] gi|2... 139 1e-32
emb|CAB52688.1| hexose transporter [Lycopersicon esculentum] 139 2e-32
>gb|AAC61852.1| putative monosaccharide transporter 1 [Petunia x hybrida]
Length = 510
Score = 142 bits (358), Expect = 2e-33
Identities = 59/98 (60%), Positives = 80/98 (81%)
Frame = -2
Query: 514 EICSLEVRSAGQALNVAVNMLFTFAIAQIFLSMLCHLKFGLFFFFAGFVVIMTIFVALFL 335
E+ +E+RSAGQ++ V+VNM FTF I Q+FL+MLC +KFGLFFFFAGFVV+MT+F+ FL
Sbjct: 413 EVFPMEIRSAGQSITVSVNMFFTFVIGQLFLTMLCEMKFGLFFFFAGFVVLMTLFIFFFL 472
Query: 334 PETKGVPIEEMNSVWRSHWFWSKIVPAADNNDNRKNTI 221
PETKG+PIEE+N +W++HWFW VP D++ + KN +
Sbjct: 473 PETKGIPIEEVNRIWKNHWFWKSYVPNDDDDHHSKNQV 510
>ref|NP_193879.1| glucose transporter; protein id: At4g21480.1 [Arabidopsis thaliana]
gi|7446744|pir||T05156 probable glucose transport
protein F18E5.100 - Arabidopsis thaliana
gi|3080392|emb|CAA18712.1| glucose transporter
[Arabidopsis thaliana] gi|7268945|emb|CAB81255.1|
glucose transporter [Arabidopsis thaliana]
gi|15487248|emb|CAC69069.1| STP12 protein [Arabidopsis
thaliana]
Length = 508
Score = 142 bits (358), Expect = 2e-33
Identities = 66/90 (73%), Positives = 76/90 (84%)
Frame = -2
Query: 514 EICSLEVRSAGQALNVAVNMLFTFAIAQIFLSMLCHLKFGLFFFFAGFVVIMTIFVALFL 335
EI LE+RSA Q++ V+VNM+FTF IAQ+FL MLCHLKFGLF FFA FVV+M+IFV LFL
Sbjct: 413 EIFPLEIRSAAQSITVSVNMIFTFLIAQVFLMMLCHLKFGLFIFFAFFVVVMSIFVYLFL 472
Query: 334 PETKGVPIEEMNSVWRSHWFWSKIVPAADN 245
PET+GVPIEEMN VWRSHW+WSK V A N
Sbjct: 473 PETRGVPIEEMNRVWRSHWYWSKFVDAEKN 502
>ref|NP_188627.1| monosaccharide transport protein, STP4; protein id: At3g19930.1,
supported by cDNA: gi_13605905, supported by cDNA:
gi_16226823 [Arabidopsis thaliana] gi|99758|pir||S25009
monosaccharide transport protein STP4 - Arabidopsis
thaliana gi|16524|emb|CAA47325.1| sugar transport
protein [Arabidopsis thaliana]
gi|11994205|dbj|BAB01308.1| monosaccharide transporter
STP4 [Arabidopsis thaliana]
gi|13605906|gb|AAK32938.1|AF367352_1 AT3g19930/MPN9_17
[Arabidopsis thaliana]
gi|16226824|gb|AAL16272.1|AF428342_1 AT3g19930/MPN9_17
[Arabidopsis thaliana] gi|22137154|gb|AAM91422.1|
AT3g19930/MPN9_17 [Arabidopsis thaliana]
Length = 514
Score = 142 bits (357), Expect = 3e-33
Identities = 63/86 (73%), Positives = 74/86 (85%)
Frame = -2
Query: 514 EICSLEVRSAGQALNVAVNMLFTFAIAQIFLSMLCHLKFGLFFFFAGFVVIMTIFVALFL 335
EI LE+RSA QA+NV+VNM FTF +AQ+FL+MLCH+KFGLFFFFA FVVIMTIF+ L L
Sbjct: 413 EISPLEIRSAAQAINVSVNMFFTFLVAQLFLTMLCHMKFGLFFFFAFFVVIMTIFIYLML 472
Query: 334 PETKGVPIEEMNSVWRSHWFWSKIVP 257
PETK VPIEEMN VW++HWFW K +P
Sbjct: 473 PETKNVPIEEMNRVWKAHWFWGKFIP 498
>dbj|BAB19864.1| monosaccharide transporter 3 [Oryza sativa]
gi|22324466|dbj|BAC10381.1| monosaccharide transporter 3
[Oryza sativa (japonica cultivar-group)]
Length = 518
Score = 139 bits (351), Expect = 1e-32
Identities = 62/85 (72%), Positives = 75/85 (87%)
Frame = -2
Query: 514 EICSLEVRSAGQALNVAVNMLFTFAIAQIFLSMLCHLKFGLFFFFAGFVVIMTIFVALFL 335
EI LE+R AGQ++NV+VNMLFTF IAQ FL+MLCH+KFGLF+FFAG+VVIMT+F+ALFL
Sbjct: 415 EIFPLEIRPAGQSINVSVNMLFTFVIAQAFLTMLCHMKFGLFYFFAGWVVIMTVFIALFL 474
Query: 334 PETKGVPIEEMNSVWRSHWFWSKIV 260
PETK VPIEEM VW+SHWFW + +
Sbjct: 475 PETKNVPIEEMVLVWKSHWFWRRFI 499
>emb|CAB52688.1| hexose transporter [Lycopersicon esculentum]
Length = 292
Score = 139 bits (350), Expect = 2e-32
Identities = 63/97 (64%), Positives = 76/97 (77%)
Frame = -2
Query: 514 EICSLEVRSAGQALNVAVNMLFTFAIAQIFLSMLCHLKFGLFFFFAGFVVIMTIFVALFL 335
EI LE+RSA Q++NV+VNM+FTFA+AQ+FL+MLCHLKFGLF FFA FVVIMT+F+ FL
Sbjct: 182 EIFPLEIRSAAQSINVSVNMIFTFAVAQVFLTMLCHLKFGLFLFFAFFVVIMTVFIYFFL 241
Query: 334 PETKGVPIEEMNSVWRSHWFWSKIVPAADNNDNRKNT 224
PETK +PIEEM VW+ HWFWSK + D R T
Sbjct: 242 PETKNIPIEEMVIVWKEHWFWSKFMTEVDYPGTRNGT 278
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 434,699,955
Number of Sequences: 1393205
Number of extensions: 9582809
Number of successful extensions: 32218
Number of sequences better than 10.0: 451
Number of HSP's better than 10.0 without gapping: 30079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31966
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 16154357632
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
