Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC020466A_C01 KMC020466A_c01
(492 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB08297.1| contains similarity to lipase~gene_id:MUA22.18 [... 55 5e-07
ref|NP_568295.1| putative protein; protein id: At5g14180.1, supp... 55 5e-07
gb|AAM44051.1|AF510494_1 putative lipase [Quercus suber] 54 7e-07
ref|NP_179126.1| putative lysosomal acid lipase; protein id: At2... 34 1.00
ref|NP_505545.1| Putative membrane protein family member, with a... 34 1.00
>dbj|BAB08297.1| contains similarity to lipase~gene_id:MUA22.18 [Arabidopsis
thaliana]
Length = 318
Score = 54.7 bits (130), Expect = 5e-07
Identities = 23/41 (56%), Positives = 31/41 (75%)
Frame = -1
Query: 486 KYHNKDRLNVQYIKEYAHSDFIMGGHAHDRVYQAMIAFLKR 364
KYH+ D++NVQ++K+YAH+DFIMG A D VY + F KR
Sbjct: 276 KYHDIDKMNVQFVKDYAHADFIMGVTAKDVVYNQVATFFKR 316
>ref|NP_568295.1| putative protein; protein id: At5g14180.1, supported by cDNA:
gi_15081687, supported by cDNA: gi_20147186 [Arabidopsis
thaliana] gi|15081688|gb|AAK82499.1| AT5g14180/MUA22_18
[Arabidopsis thaliana] gi|20147187|gb|AAM10310.1|
AT5g14180/MUA22_18 [Arabidopsis thaliana]
Length = 205
Score = 54.7 bits (130), Expect = 5e-07
Identities = 23/41 (56%), Positives = 31/41 (75%)
Frame = -1
Query: 486 KYHNKDRLNVQYIKEYAHSDFIMGGHAHDRVYQAMIAFLKR 364
KYH+ D++NVQ++K+YAH+DFIMG A D VY + F KR
Sbjct: 163 KYHDIDKMNVQFVKDYAHADFIMGVTAKDVVYNQVATFFKR 203
>gb|AAM44051.1|AF510494_1 putative lipase [Quercus suber]
Length = 53
Score = 54.3 bits (129), Expect = 7e-07
Identities = 24/42 (57%), Positives = 32/42 (76%)
Frame = -1
Query: 492 DLKYHNKDRLNVQYIKEYAHSDFIMGGHAHDRVYQAMIAFLK 367
DLK H+ D+L+VQ+IK+YAH+DFIMG A D VY ++ F K
Sbjct: 9 DLKSHDVDKLSVQFIKDYAHADFIMGVSAKDVVYNQVVKFFK 50
>ref|NP_179126.1| putative lysosomal acid lipase; protein id: At2g15230.1
[Arabidopsis thaliana] gi|25411617|pir||E84526 probable
lysosomal acid lipase [imported] - Arabidopsis thaliana
gi|4585908|gb|AAD25569.1| putative lysosomal acid lipase
[Arabidopsis thaliana]
Length = 344
Score = 33.9 bits (76), Expect = 1.00
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -1
Query: 453 YIKEYAHSDFIMGGHAHDRVYQAMIAFLK 367
Y+++Y H DF++G A + VY+ MI F +
Sbjct: 308 YLEDYGHIDFVLGSSAKEDVYKHMIQFFR 336
>ref|NP_505545.1| Putative membrane protein family member, with at least 2
transmembrane domains, nematode specific [Caenorhabditis
elegans] gi|7507664|pir||T24822 hypothetical protein
T11A5.3 - Caenorhabditis elegans
gi|3879680|emb|CAA96683.1| Hypothetical protein T11A5.3
[Caenorhabditis elegans]
Length = 355
Score = 33.9 bits (76), Expect = 1.00
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = -1
Query: 102 CTYSVIRRKLYPTINFSGKCVSHGCFCILNFFI 4
C + ++ +K+Y T+NFS +S C+C+ N+ I
Sbjct: 296 CKFKMVLQKIYITVNFSKFGISLVCYCVYNYSI 328
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 412,860,634
Number of Sequences: 1393205
Number of extensions: 8214348
Number of successful extensions: 17073
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 16688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17069
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 14203329973
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
