Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC020182A_C01 KMC020182A_c01
(493 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB01047.1| dihydrolipoamide S-acetyltransferase [Arabidopsi... 108 3e-23
ref|NP_189215.1| dihydrolipoamide S-acetyltransferase; protein i... 108 3e-23
gb|AAK76609.2| putative dihydrolipoamide S-acetyltransferase [Ar... 108 3e-23
ref|NP_174703.1| dihydrolipoamide S-acetyltransferase, putative;... 81 5e-15
gb|AAM60857.1| dihydrolipoamide S-acetyltransferase, putative [A... 81 5e-15
>dbj|BAB01047.1| dihydrolipoamide S-acetyltransferase [Arabidopsis thaliana]
Length = 432
Score = 108 bits (270), Expect = 3e-23
Identities = 53/58 (91%), Positives = 56/58 (96%)
Frame = -3
Query: 491 AVGASKPTVLADKDGFFSVKNKMLVNVTADHRIIYGADLAAFLQTFTKIIENPESLTL 318
AVGASKPTV+ADKDGFFSVKN MLVNVTADHRI+YGADLAAFLQTF KIIENP+SLTL
Sbjct: 375 AVGASKPTVVADKDGFFSVKNTMLVNVTADHRIVYGADLAAFLQTFAKIIENPDSLTL 432
>ref|NP_189215.1| dihydrolipoamide S-acetyltransferase; protein id: At3g25860.1,
supported by cDNA: gi_14335165, supported by cDNA:
gi_5881962 [Arabidopsis thaliana]
gi|5881963|gb|AAD55139.1|AF066079_1 dihydrolipoamide
S-acetyltransferase [Arabidopsis thaliana]
gi|14335166|gb|AAK59863.1| AT3g25860/MPE11_1
[Arabidopsis thaliana] gi|26983848|gb|AAN86176.1|
putative dihydrolipoamide S-acetyltransferase
[Arabidopsis thaliana]
Length = 480
Score = 108 bits (270), Expect = 3e-23
Identities = 53/58 (91%), Positives = 56/58 (96%)
Frame = -3
Query: 491 AVGASKPTVLADKDGFFSVKNKMLVNVTADHRIIYGADLAAFLQTFTKIIENPESLTL 318
AVGASKPTV+ADKDGFFSVKN MLVNVTADHRI+YGADLAAFLQTF KIIENP+SLTL
Sbjct: 423 AVGASKPTVVADKDGFFSVKNTMLVNVTADHRIVYGADLAAFLQTFAKIIENPDSLTL 480
>gb|AAK76609.2| putative dihydrolipoamide S-acetyltransferase [Arabidopsis
thaliana]
Length = 369
Score = 108 bits (270), Expect = 3e-23
Identities = 53/58 (91%), Positives = 56/58 (96%)
Frame = -3
Query: 491 AVGASKPTVLADKDGFFSVKNKMLVNVTADHRIIYGADLAAFLQTFTKIIENPESLTL 318
AVGASKPTV+ADKDGFFSVKN MLVNVTADHRI+YGADLAAFLQTF KIIENP+SLTL
Sbjct: 312 AVGASKPTVVADKDGFFSVKNTMLVNVTADHRIVYGADLAAFLQTFAKIIENPDSLTL 369
>ref|NP_174703.1| dihydrolipoamide S-acetyltransferase, putative; protein id:
At1g34430.1, supported by cDNA: 101686. [Arabidopsis
thaliana] gi|12323852|gb|AAG51893.1|AC023913_1
dihydrolipoamide S-acetyltransferase, putative;
19109-21166 [Arabidopsis thaliana]
gi|22135832|gb|AAM91102.1| At1g34430/F7P12_2
[Arabidopsis thaliana] gi|24111345|gb|AAN46796.1|
At1g34430/F7P12_2 [Arabidopsis thaliana]
Length = 465
Score = 81.3 bits (199), Expect = 5e-15
Identities = 39/57 (68%), Positives = 47/57 (82%)
Frame = -3
Query: 491 AVGASKPTVLADKDGFFSVKNKMLVNVTADHRIIYGADLAAFLQTFTKIIENPESLT 321
AVGAS+P+V+A KDG +KN+M VNVTADHR+IYGADLA FLQT IIE+P+ LT
Sbjct: 408 AVGASQPSVVATKDGRIGMKNQMQVNVTADHRVIYGADLAQFLQTLASIIEDPKDLT 464
>gb|AAM60857.1| dihydrolipoamide S-acetyltransferase, putative [Arabidopsis
thaliana]
Length = 464
Score = 81.3 bits (199), Expect = 5e-15
Identities = 39/57 (68%), Positives = 47/57 (82%)
Frame = -3
Query: 491 AVGASKPTVLADKDGFFSVKNKMLVNVTADHRIIYGADLAAFLQTFTKIIENPESLT 321
AVGAS+P+V+A KDG +KN+M VNVTADHR+IYGADLA FLQT IIE+P+ LT
Sbjct: 407 AVGASQPSVVATKDGRIGMKNQMQVNVTADHRVIYGADLAQFLQTLASIIEDPKDLT 463
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 386,681,492
Number of Sequences: 1393205
Number of extensions: 7631546
Number of successful extensions: 24679
Number of sequences better than 10.0: 223
Number of HSP's better than 10.0 without gapping: 24392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24675
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 14203329973
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
