Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC020064A_C01 KMC020064A_c01
(578 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_201079.1| nitrate transporter NTL1 - like protein; protei... 194 5e-49
dbj|BAB10842.1| nitrate transporter NTL1 [Arabidopsis thaliana] 194 5e-49
pir||G96720 nitrate transporter (NTL1), 53025-56402 [imported] -... 186 2e-46
ref|NP_564978.1| nitrate transporter (NTL1); protein id: At1g698... 186 2e-46
gb|AAL32531.1| nitrate transporter (NTL1) [Arabidopsis thaliana]... 186 2e-46
>ref|NP_201079.1| nitrate transporter NTL1 - like protein; protein id: At5g62730.1
[Arabidopsis thaliana]
Length = 589
Score = 194 bits (494), Expect = 5e-49
Identities = 89/115 (77%), Positives = 101/115 (87%)
Frame = -3
Query: 576 MTFLWVAFQYLFLGSADLFTLAGMMEFFFTEAPWSMRSLATALSWASLSMGYFLSTVLVS 397
+TFLWVA QY+FLGSADLFTLAGMMEFFFTEAP +MRSLAT+LSWASL+MGY+ S+VLVS
Sbjct: 473 ITFLWVAIQYVFLGSADLFTLAGMMEFFFTEAPSTMRSLATSLSWASLAMGYYFSSVLVS 532
Query: 396 IINKVTGAFGHTPWLLGSNLNHYHLERFYWLMCVLSGLNFIHYLFWANSYKYRGS 232
+N VTG H PWLLG NLN YHLERFYWLMCVLSG+NF+HYLFWA+ Y YR +
Sbjct: 533 AVNFVTGLNHHNPWLLGENLNQYHLERFYWLMCVLSGINFLHYLFWASRYVYRSN 587
>dbj|BAB10842.1| nitrate transporter NTL1 [Arabidopsis thaliana]
Length = 558
Score = 194 bits (494), Expect = 5e-49
Identities = 89/115 (77%), Positives = 101/115 (87%)
Frame = -3
Query: 576 MTFLWVAFQYLFLGSADLFTLAGMMEFFFTEAPWSMRSLATALSWASLSMGYFLSTVLVS 397
+TFLWVA QY+FLGSADLFTLAGMMEFFFTEAP +MRSLAT+LSWASL+MGY+ S+VLVS
Sbjct: 442 ITFLWVAIQYVFLGSADLFTLAGMMEFFFTEAPSTMRSLATSLSWASLAMGYYFSSVLVS 501
Query: 396 IINKVTGAFGHTPWLLGSNLNHYHLERFYWLMCVLSGLNFIHYLFWANSYKYRGS 232
+N VTG H PWLLG NLN YHLERFYWLMCVLSG+NF+HYLFWA+ Y YR +
Sbjct: 502 AVNFVTGLNHHNPWLLGENLNQYHLERFYWLMCVLSGINFLHYLFWASRYVYRSN 556
>pir||G96720 nitrate transporter (NTL1), 53025-56402 [imported] - Arabidopsis
thaliana gi|12325224|gb|AAG52554.1|AC010675_2 nitrate
transporter (NTL1); 53025-56402 [Arabidopsis thaliana]
Length = 600
Score = 186 bits (471), Expect = 2e-46
Identities = 82/115 (71%), Positives = 101/115 (87%)
Frame = -3
Query: 576 MTFLWVAFQYLFLGSADLFTLAGMMEFFFTEAPWSMRSLATALSWASLSMGYFLSTVLVS 397
+TFLW+A QYLFLGSADLFTLAG++E+FFTEAP SMRSLAT+LSWASL+MGY+LS+V+VS
Sbjct: 482 VTFLWIALQYLFLGSADLFTLAGLLEYFFTEAPSSMRSLATSLSWASLAMGYYLSSVIVS 541
Query: 396 IINKVTGAFGHTPWLLGSNLNHYHLERFYWLMCVLSGLNFIHYLFWANSYKYRGS 232
I+N +TG+ G+TPWL G ++N Y L+ FYWLMCVLS NF+HYLFWA YKYR +
Sbjct: 542 IVNSITGSSGNTPWLRGKSINRYKLDYFYWLMCVLSAANFLHYLFWAMRYKYRST 596
>ref|NP_564978.1| nitrate transporter (NTL1); protein id: At1g69850.1, supported by
cDNA: gi_17064753, supported by cDNA: gi_3377516
[Arabidopsis thaliana] gi|23397158|gb|AAN31862.1|
putative nitrate transporter (NTL1) [Arabidopsis
thaliana]
Length = 585
Score = 186 bits (471), Expect = 2e-46
Identities = 82/115 (71%), Positives = 101/115 (87%)
Frame = -3
Query: 576 MTFLWVAFQYLFLGSADLFTLAGMMEFFFTEAPWSMRSLATALSWASLSMGYFLSTVLVS 397
+TFLW+A QYLFLGSADLFTLAG++E+FFTEAP SMRSLAT+LSWASL+MGY+LS+V+VS
Sbjct: 467 VTFLWIALQYLFLGSADLFTLAGLLEYFFTEAPSSMRSLATSLSWASLAMGYYLSSVIVS 526
Query: 396 IINKVTGAFGHTPWLLGSNLNHYHLERFYWLMCVLSGLNFIHYLFWANSYKYRGS 232
I+N +TG+ G+TPWL G ++N Y L+ FYWLMCVLS NF+HYLFWA YKYR +
Sbjct: 527 IVNSITGSSGNTPWLRGKSINRYKLDYFYWLMCVLSAANFLHYLFWAMRYKYRST 581
>gb|AAL32531.1| nitrate transporter (NTL1) [Arabidopsis thaliana]
gi|27311911|gb|AAO00921.1| nitrate transporter (NTL1)
[Arabidopsis thaliana]
Length = 585
Score = 186 bits (471), Expect = 2e-46
Identities = 82/115 (71%), Positives = 101/115 (87%)
Frame = -3
Query: 576 MTFLWVAFQYLFLGSADLFTLAGMMEFFFTEAPWSMRSLATALSWASLSMGYFLSTVLVS 397
+TFLW+A QYLFLGSADLFTLAG++E+FFTEAP SMRSLAT+LSWASL+MGY+LS+V+VS
Sbjct: 467 VTFLWIALQYLFLGSADLFTLAGLLEYFFTEAPSSMRSLATSLSWASLAMGYYLSSVIVS 526
Query: 396 IINKVTGAFGHTPWLLGSNLNHYHLERFYWLMCVLSGLNFIHYLFWANSYKYRGS 232
I+N +TG+ G+TPWL G ++N Y L+ FYWLMCVLS NF+HYLFWA YKYR +
Sbjct: 527 IVNSITGSSGNTPWLRGKSINRYKLDYFYWLMCVLSAANFLHYLFWAMRYKYRST 581
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 532,765,127
Number of Sequences: 1393205
Number of extensions: 11659627
Number of successful extensions: 35150
Number of sequences better than 10.0: 181
Number of HSP's better than 10.0 without gapping: 33888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35018
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 21426319650
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
