Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC019876A_C01 KMC019876A_c01
(539 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P93162|CHLI_SOYBN Magnesium-chelatase subunit chlI, chloropla... 232 2e-60
gb|AAG35472.1|U67064_1 sulfur [Nicotiana tabacum] 216 1e-55
sp|O22436|CHLI_TOBAC Magnesium-chelatase subunit chlI, chloropla... 216 1e-55
ref|NP_199405.1| magnesium chelatase subunit of protochlorophyll... 209 2e-53
dbj|BAB09321.1| magnesium chelatase subunit of protochlorophylli... 209 2e-53
>sp|P93162|CHLI_SOYBN Magnesium-chelatase subunit chlI, chloroplast precursor
(Mg-protoporphyrin IX chelatase) gi|2129847|pir||JC4312
chlorophyll magnesium chelatase (EC 4.99.1.-) - soybean
chloroplast gi|1732469|dbj|BAA08291.1| Mg chelatase
subunit (46 kD) [Glycine max]
Length = 421
Score = 232 bits (591), Expect = 2e-60
Identities = 118/127 (92%), Positives = 124/127 (96%)
Frame = -3
Query: 537 RVKIVEERGRFDKNPKEFRETYKAEQQKLTDQITAARSVLSAVQIDQDLKVKISKVCAEL 358
RVKIVEERGRFDKNPKEFR++YKAEQ+KL QIT+ARSVLS+VQIDQDLKVKISKVCAEL
Sbjct: 295 RVKIVEERGRFDKNPKEFRDSYKAEQEKLQQQITSARSVLSSVQIDQDLKVKISKVCAEL 354
Query: 357 NVDGLRGDIVTNRAAQALAALKGRDKVSAEDIATVIPNCLRHRLRKDPLESIDSGLLVTE 178
NVDGLRGDIVTNRAA+ALAALKGRD VSAEDIATVIPNCLRHRLRKDPLESIDSGLLVTE
Sbjct: 355 NVDGLRGDIVTNRAAKALAALKGRDNVSAEDIATVIPNCLRHRLRKDPLESIDSGLLVTE 414
Query: 177 KFYEVFS 157
KFYEVFS
Sbjct: 415 KFYEVFS 421
>gb|AAG35472.1|U67064_1 sulfur [Nicotiana tabacum]
Length = 424
Score = 216 bits (551), Expect = 1e-55
Identities = 109/127 (85%), Positives = 119/127 (92%)
Frame = -3
Query: 537 RVKIVEERGRFDKNPKEFRETYKAEQQKLTDQITAARSVLSAVQIDQDLKVKISKVCAEL 358
RVKIVEER RFDKNPKEFRE+YKAEQ+KL +QI +AR+ LSAV ID DL+VKISKVCAEL
Sbjct: 298 RVKIVEERARFDKNPKEFRESYKAEQEKLQNQIDSARNALSAVTIDHDLRVKISKVCAEL 357
Query: 357 NVDGLRGDIVTNRAAQALAALKGRDKVSAEDIATVIPNCLRHRLRKDPLESIDSGLLVTE 178
NVDGLRGDIVTNRAA+ALAALKGRDKV+ EDIATVIPNCLRHRLRKDPLESIDSG+LV E
Sbjct: 358 NVDGLRGDIVTNRAARALAALKGRDKVTPEDIATVIPNCLRHRLRKDPLESIDSGVLVVE 417
Query: 177 KFYEVFS 157
KFYEVF+
Sbjct: 418 KFYEVFA 424
>sp|O22436|CHLI_TOBAC Magnesium-chelatase subunit chlI, chloroplast precursor
(Mg-protoporphyrin IX chelatase) gi|7489192|pir||T01790
protoporphyrin IX magnesium chelatase (EC 4.99.1.-) chlI
- common tobacco gi|2323329|gb|AAB97153.1| Mg
protoporphyrin chelatase subunit [Nicotiana tabacum]
Length = 426
Score = 216 bits (551), Expect = 1e-55
Identities = 109/127 (85%), Positives = 119/127 (92%)
Frame = -3
Query: 537 RVKIVEERGRFDKNPKEFRETYKAEQQKLTDQITAARSVLSAVQIDQDLKVKISKVCAEL 358
RVKIVEER RFDKNPKEFRE+YKAEQ+KL +QI +AR+ LSAV ID DL+VKISKVCAEL
Sbjct: 300 RVKIVEERARFDKNPKEFRESYKAEQEKLQNQIDSARNALSAVTIDHDLRVKISKVCAEL 359
Query: 357 NVDGLRGDIVTNRAAQALAALKGRDKVSAEDIATVIPNCLRHRLRKDPLESIDSGLLVTE 178
NVDGLRGDIVTNRAA+ALAALKGRDKV+ EDIATVIPNCLRHRLRKDPLESIDSG+LV E
Sbjct: 360 NVDGLRGDIVTNRAARALAALKGRDKVTPEDIATVIPNCLRHRLRKDPLESIDSGVLVVE 419
Query: 177 KFYEVFS 157
KFYEVF+
Sbjct: 420 KFYEVFA 426
>ref|NP_199405.1| magnesium chelatase subunit of protochlorophyllide reductase;
protein id: At5g45930.1 [Arabidopsis thaliana]
Length = 423
Score = 209 bits (532), Expect = 2e-53
Identities = 105/127 (82%), Positives = 117/127 (91%)
Frame = -3
Query: 537 RVKIVEERGRFDKNPKEFRETYKAEQQKLTDQITAARSVLSAVQIDQDLKVKISKVCAEL 358
RVKIVEER RFD NPKEFRETY+ EQ KL +QIT ARS LSAVQIDQDLKVKISKVCAEL
Sbjct: 297 RVKIVEERARFDSNPKEFRETYQEEQLKLQEQITTARSNLSAVQIDQDLKVKISKVCAEL 356
Query: 357 NVDGLRGDIVTNRAAQALAALKGRDKVSAEDIATVIPNCLRHRLRKDPLESIDSGLLVTE 178
+VDGLRGD+V NRAA+ALAAL+GRD+V+AED+ VIPNCLRHRLRKDPLES+DSG+LVTE
Sbjct: 357 DVDGLRGDMVINRAARALAALQGRDQVTAEDVGIVIPNCLRHRLRKDPLESMDSGILVTE 416
Query: 177 KFYEVFS 157
KFYEVF+
Sbjct: 417 KFYEVFT 423
>dbj|BAB09321.1| magnesium chelatase subunit of protochlorophyllide reductase
[Arabidopsis thaliana]
Length = 423
Score = 209 bits (532), Expect = 2e-53
Identities = 105/127 (82%), Positives = 117/127 (91%)
Frame = -3
Query: 537 RVKIVEERGRFDKNPKEFRETYKAEQQKLTDQITAARSVLSAVQIDQDLKVKISKVCAEL 358
RVKIVEER RFD NPKEFRETY+ EQ KL +QIT ARS LSAVQIDQDLKVKISKVCAEL
Sbjct: 297 RVKIVEERARFDSNPKEFRETYQEEQLKLQEQITTARSNLSAVQIDQDLKVKISKVCAEL 356
Query: 357 NVDGLRGDIVTNRAAQALAALKGRDKVSAEDIATVIPNCLRHRLRKDPLESIDSGLLVTE 178
+VDGLRGD+V NRAA+ALAAL+GRD+V+AED+ VIPNCLRHRLRKDPLES+DSG+LVTE
Sbjct: 357 DVDGLRGDMVINRAARALAALQGRDQVTAEDVGIVIPNCLRHRLRKDPLESMDSGILVTE 416
Query: 177 KFYEVFS 157
KFYEVF+
Sbjct: 417 KFYEVFT 423
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 411,389,389
Number of Sequences: 1393205
Number of extensions: 7734443
Number of successful extensions: 20884
Number of sequences better than 10.0: 210
Number of HSP's better than 10.0 without gapping: 20400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20870
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18462123008
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
