Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC019820A_C01 KMC019820A_c01
(597 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_190278.1| dUTP pyrophosphatase-like protein; protein id: ... 224 5e-58
sp|P32518|DUT_LYCES Deoxyuridine 5'-triphosphate nucleotidohydro... 221 7e-57
ref|NP_593873.1| deoxyuridine 5'-triphosphate nucleotidohydrolas... 173 1e-42
sp|P43058|DUT_CANAL Deoxyuridine 5'-triphosphate nucleotidohydro... 166 2e-40
ref|NP_723647.1| CG4584-PB [Drosophila melanogaster] gi|22946223... 163 2e-39
>ref|NP_190278.1| dUTP pyrophosphatase-like protein; protein id: At3g46940.1,
supported by cDNA: gi_13878142, supported by cDNA:
gi_17104548 [Arabidopsis thaliana]
gi|7435915|pir||T12954 dUTP pyrophosphatase homolog
T6H20.30 - Arabidopsis thaliana
gi|5541665|emb|CAB51171.1| dUTP pyrophosphatase-like
protein [Arabidopsis thaliana]
gi|13878143|gb|AAK44149.1|AF370334_1 putative dUTP
pyrophosphatase [Arabidopsis thaliana]
gi|17104549|gb|AAL34163.1| putative dUTP pyrophosphatase
[Arabidopsis thaliana]
Length = 166
Score = 224 bits (572), Expect = 5e-58
Identities = 109/127 (85%), Positives = 118/127 (92%)
Frame = -3
Query: 595 LPARASHLSAGYDLSSAVETKVPARGKALVATDISISIPEGTYARIAPRSGLTWKHSIDV 416
+P R S LSAGYDLSSAV++KVPARGKAL+ TD+SI++PEGTYARIAPRSGL WKHSIDV
Sbjct: 40 IPTRGSPLSAGYDLSSAVDSKVPARGKALIPTDLSIAVPEGTYARIAPRSGLAWKHSIDV 99
Query: 415 GAGVIDADYRGPVGVILFNHSDLDFEVKIGDRIAQLIIEKIVTPDVAEVEDLDSTVRGEG 236
GAGVIDADYRGPVGVILFNHSD DFEVK GDRIAQLIIEKIVTPDV EV+DLD TVRG+G
Sbjct: 100 GAGVIDADYRGPVGVILFNHSDADFEVKFGDRIAQLIIEKIVTPDVVEVDDLDETVRGDG 159
Query: 235 GFGSTGV 215
GFGSTGV
Sbjct: 160 GFGSTGV 166
>sp|P32518|DUT_LYCES Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) (dUTP
pyrophosphatase) (P18) gi|282947|pir||JQ1599 dUTP
diphosphatase (EC 3.6.1.23) - tomato
gi|251897|gb|AAB22611.1| deoxyuridine triphosphatase;
dUTPase; P18 [Lycopersicon esculentum]
Length = 169
Score = 221 bits (562), Expect = 7e-57
Identities = 105/127 (82%), Positives = 121/127 (94%)
Frame = -3
Query: 595 LPARASHLSAGYDLSSAVETKVPARGKALVATDISISIPEGTYARIAPRSGLTWKHSIDV 416
LP+RAS L+AGYDLSSA ETKVPARGKALV TD+SI++P+GTYARIAPRSGL WK+SIDV
Sbjct: 43 LPSRASSLAAGYDLSSAAETKVPARGKALVPTDLSIAVPQGTYARIAPRSGLAWKYSIDV 102
Query: 415 GAGVIDADYRGPVGVILFNHSDLDFEVKIGDRIAQLIIEKIVTPDVAEVEDLDSTVRGEG 236
GAGVIDADYRGPVGV+LFNHS++DFEVK+GDRIAQLI++KIVTP+V +V+DLDSTVRG G
Sbjct: 103 GAGVIDADYRGPVGVVLFNHSEVDFEVKVGDRIAQLIVQKIVTPEVEQVDDLDSTVRGSG 162
Query: 235 GFGSTGV 215
GFGSTGV
Sbjct: 163 GFGSTGV 169
>ref|NP_593873.1| deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23);
dUTP pyrophosphatase [Schizosaccharomyces pombe]
gi|13124143|sp|Q9P6Q5|DUT_SCHPO Probable deoxyuridine
5'-triphosphate nucleotidohydrolase (dUTPase) (dUTP
pyrophosphatase) gi|7708584|emb|CAB90132.1| deoxyuridine
5'-triphosphate nucleotidohydrolase (EC 3.6.1.23); dUTP
pyrophosphatase [Schizosaccharomyces pombe]
Length = 140
Score = 173 bits (439), Expect = 1e-42
Identities = 85/127 (66%), Positives = 102/127 (79%)
Frame = -3
Query: 595 LPARASHLSAGYDLSSAVETKVPARGKALVATDISISIPEGTYARIAPRSGLTWKHSIDV 416
+P + S SAGYDL +A E VP RGK LV TD++I++PEGTY R+APRSGL KHSID
Sbjct: 14 IPTKGSANSAGYDLYAAAECIVPRRGKVLVDTDLAIAVPEGTYGRVAPRSGLASKHSIDT 73
Query: 415 GAGVIDADYRGPVGVILFNHSDLDFEVKIGDRIAQLIIEKIVTPDVAEVEDLDSTVRGEG 236
GAGVIDADYRG V V+LFN+SD+DF +K+GDRIAQLI+E+IV P V VE L++TVRG
Sbjct: 74 GAGVIDADYRGHVRVLLFNYSDVDFPIKVGDRIAQLILERIVNPPVILVESLEATVRGAN 133
Query: 235 GFGSTGV 215
GFGSTGV
Sbjct: 134 GFGSTGV 140
>sp|P43058|DUT_CANAL Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase) (dUTP
pyrophosphatase) gi|2118161|pir||S51498 dUTP
diphosphatase (EC 3.6.1.23) - yeast (Candida albicans)
gi|457721|emb|CAA54897.1| dUTPase [Candida albicans]
Length = 159
Score = 166 bits (421), Expect = 2e-40
Identities = 82/128 (64%), Positives = 100/128 (78%), Gaps = 2/128 (1%)
Frame = -3
Query: 595 LPARASHLSAGYDLSSAVETKVPARGKALVATDISISIPEGTYARIAPRSGLTWKHSIDV 416
+P + S L+AGYDL SA +PA G+ LV+TDISI +P GTY R+APRSGL KH I
Sbjct: 30 VPTKGSALAAGYDLYSAEAATIPAHGQGLVSTDISIIVPIGTYGRVAPRSGLAVKHGIST 89
Query: 415 GAGVIDADYRGPVGVILFNHSDLDFEVKIGDRIAQLIIEKIVTPDVAEV--EDLDSTVRG 242
GAGVIDADYRG V V+LFNHS+ DFE+K GDRIAQL++E+IV D+ E+ E+LD+T RG
Sbjct: 90 GAGVIDADYRGEVKVVLFNHSEKDFEIKEGDRIAQLVLEQIVNADIKEISLEELDNTERG 149
Query: 241 EGGFGSTG 218
EGGFGSTG
Sbjct: 150 EGGFGSTG 157
>ref|NP_723647.1| CG4584-PB [Drosophila melanogaster] gi|22946223|gb|AAN10772.1|
CG4584-PB [Drosophila melanogaster]
Length = 174
Score = 163 bits (412), Expect = 2e-39
Identities = 79/126 (62%), Positives = 96/126 (75%)
Frame = -3
Query: 592 PARASHLSAGYDLSSAVETKVPARGKALVATDISISIPEGTYARIAPRSGLTWKHSIDVG 413
P R S +AG DL SA + VPARGKA+V TD+ + +PEG+Y R+APRSGL K+ IDVG
Sbjct: 20 PVRGSAKAAGVDLRSAYDVVVPARGKAIVKTDLQVQVPEGSYGRVAPRSGLAVKNFIDVG 79
Query: 412 AGVIDADYRGPVGVILFNHSDLDFEVKIGDRIAQLIIEKIVTPDVAEVEDLDSTVRGEGG 233
AGV+D DYRG +GV+LFNHSD+DFEVK GDRIAQ I E+I P + V+ L+ T RGE G
Sbjct: 80 AGVVDEDYRGNLGVVLFNHSDVDFEVKHGDRIAQFICERIFYPQLVMVDKLEDTERGEAG 139
Query: 232 FGSTGV 215
FGSTGV
Sbjct: 140 FGSTGV 145
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 540,976,700
Number of Sequences: 1393205
Number of extensions: 12524095
Number of successful extensions: 39774
Number of sequences better than 10.0: 375
Number of HSP's better than 10.0 without gapping: 35753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39066
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23140425222
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
