Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC019565A_C01 KMC019565A_c01
(484 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_564590.1| expressed protein; protein id: At1g51440.1, sup... 110 6e-24
pir||H86202 hypothetical protein [imported] - Arabidopsis thalia... 107 9e-23
ref|NP_565701.1| putative lipase; protein id: At2g30550.1, suppo... 106 2e-22
pir||G84709 probable lipase [imported] - Arabidopsis thaliana 106 2e-22
dbj|BAB89206.1| lipase-like protein [Oryza sativa (japonica cult... 86 2e-16
>ref|NP_564590.1| expressed protein; protein id: At1g51440.1, supported by cDNA:
gi_15983395 [Arabidopsis thaliana]
gi|25405467|pir||F96552 hypothetical protein F5D21.19
[imported] - Arabidopsis thaliana
gi|12325376|gb|AAG52635.1|AC024261_22 hypothetical
protein; 69776-68193 [Arabidopsis thaliana]
gi|15983396|gb|AAL11566.1|AF424572_1 At1g51440/F5D21_19
[Arabidopsis thaliana] gi|22655390|gb|AAM98287.1|
At1g51440/F5D21_19 [Arabidopsis thaliana]
Length = 527
Score = 110 bits (276), Expect = 6e-24
Identities = 58/104 (55%), Positives = 69/104 (65%), Gaps = 6/104 (5%)
Frame = -1
Query: 484 PDGDGACAHNLEAHLHLLDGYHGKNRE----FKPMIGRDLALVNKDCDFLKDEHSVPPKW 317
P D CAHNLEA LHL+DGYHGK+ E F + RD+ALVNK CDFL+ E+ VPP W
Sbjct: 415 PTKDLGCAHNLEALLHLVDGYHGKDEEAEKRFCLVTKRDIALVNKSCDFLRGEYHVPPCW 474
Query: 316 RQDHNKNMVRTEDGRWVLAERPKPDDH-PEYTQQHLTE-LGLAN 191
RQD NK MV+ DG+WVL +RP + H PE HL + LG N
Sbjct: 475 RQDENKGMVKNGDGQWVLPDRPLLEPHGPEDIAHHLQQVLGKVN 518
>pir||H86202 hypothetical protein [imported] - Arabidopsis thaliana
gi|7523699|gb|AAF63138.1|AC011001_8 Similar to lipases
[Arabidopsis thaliana] gi|20466266|gb|AAM20450.1|
lipase, putative [Arabidopsis thaliana]
Length = 515
Score = 107 bits (266), Expect = 9e-23
Identities = 56/95 (58%), Positives = 62/95 (64%), Gaps = 1/95 (1%)
Frame = -1
Query: 484 PDGDGACAHNLEAHLHLLDGYHGKNREFKPMIGRDLALVNKDCDFLKDEHSVPPKWRQDH 305
P D + AHNLEA LHLLDGYHGK + F GRD ALVNK DFLKD VPP WRQD
Sbjct: 414 PTVDLSTAHNLEALLHLLDGYHGKGQRFVLSSGRDPALVNKASDFLKDHFMVPPYWRQDA 473
Query: 304 NKNMVRTEDGRWVLAERPKPDD-HPEYTQQHLTEL 203
NK MVR DGRW+ +R + DD H Q LT+L
Sbjct: 474 NKGMVRNTDGRWIQPDRIRADDQHAPDIHQLLTQL 508
>ref|NP_565701.1| putative lipase; protein id: At2g30550.1, supported by cDNA:
207043., supported by cDNA: gi_20268777 [Arabidopsis
thaliana] gi|20198327|gb|AAB63082.2| putative lipase
[Arabidopsis thaliana] gi|20268778|gb|AAM14092.1|
putative lipase [Arabidopsis thaliana]
gi|21554152|gb|AAM63231.1| putative lipase [Arabidopsis
thaliana] gi|23296757|gb|AAN13163.1| putative lipase
[Arabidopsis thaliana]
Length = 529
Score = 106 bits (264), Expect = 2e-22
Identities = 55/98 (56%), Positives = 65/98 (66%), Gaps = 2/98 (2%)
Frame = -1
Query: 484 PDGDGACAHNLEAHLHLLDGYHGKNREFKPMIGRDLALVNKDCDFLKDEHSVPPKWRQDH 305
P D + AHNLEA LHLLDGYHGK F GRD ALVNK DFLK+ +PP WRQD
Sbjct: 429 PSVDVSTAHNLEAMLHLLDGYHGKGERFVLSSGRDHALVNKASDFLKEHLQIPPFWRQDA 488
Query: 304 NKNMVRTEDGRWVLAERPKPDDH--PEYTQQHLTELGL 197
NK MVR +GRW+ AER + +DH P+ HL++L L
Sbjct: 489 NKGMVRNSEGRWIQAERLRFEDHHSPD-IHHHLSQLRL 525
>pir||G84709 probable lipase [imported] - Arabidopsis thaliana
Length = 447
Score = 106 bits (264), Expect = 2e-22
Identities = 55/98 (56%), Positives = 65/98 (66%), Gaps = 2/98 (2%)
Frame = -1
Query: 484 PDGDGACAHNLEAHLHLLDGYHGKNREFKPMIGRDLALVNKDCDFLKDEHSVPPKWRQDH 305
P D + AHNLEA LHLLDGYHGK F GRD ALVNK DFLK+ +PP WRQD
Sbjct: 347 PSVDVSTAHNLEAMLHLLDGYHGKGERFVLSSGRDHALVNKASDFLKEHLQIPPFWRQDA 406
Query: 304 NKNMVRTEDGRWVLAERPKPDDH--PEYTQQHLTELGL 197
NK MVR +GRW+ AER + +DH P+ HL++L L
Sbjct: 407 NKGMVRNSEGRWIQAERLRFEDHHSPD-IHHHLSQLRL 443
>dbj|BAB89206.1| lipase-like protein [Oryza sativa (japonica cultivar-group)]
Length = 403
Score = 85.9 bits (211), Expect = 2e-16
Identities = 39/80 (48%), Positives = 55/80 (68%)
Frame = -1
Query: 478 GDGACAHNLEAHLHLLDGYHGKNREFKPMIGRDLALVNKDCDFLKDEHSVPPKWRQDHNK 299
G + +H+LE HLH + G+HG +R F+ ++ RD+ALVNK D L DE+ VP +W+ HNK
Sbjct: 317 GSESQSHDLECHLHGVAGWHGDHRGFELVVDRDVALVNKFDDCLADEYPVPVRWKVHHNK 376
Query: 298 NMVRTEDGRWVLAERPKPDD 239
+MV+ DGRWVL + DD
Sbjct: 377 SMVKGPDGRWVLQDHEPDDD 396
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 428,667,061
Number of Sequences: 1393205
Number of extensions: 8706971
Number of successful extensions: 22696
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 21870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22687
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 13689082854
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
