Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC019375A_C01 KMC019375A_c01
(747 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_177698.1| unknown protein; protein id: At1g75690.1 [Arabi... 232 5e-60
gb|AAF87111.1|AC006434_7 F10A5.12 [Arabidopsis thaliana] 211 9e-54
ref|NP_181032.1| unknown protein; protein id: At2g34860.1, suppo... 47 3e-04
ref|NP_116638.1| involved in protection against heat-induced pro... 47 4e-04
ref|NP_658345.1| DnaJ_C, DnaJ C terminal region [Bacillus anthra... 46 5e-04
>ref|NP_177698.1| unknown protein; protein id: At1g75690.1 [Arabidopsis thaliana]
gi|26450801|dbj|BAC42509.1| unknown protein [Arabidopsis
thaliana] gi|27311545|gb|AAO00738.1| unknown protein
[Arabidopsis thaliana]
Length = 154
Score = 232 bits (591), Expect = 5e-60
Identities = 114/150 (76%), Positives = 128/150 (85%), Gaps = 1/150 (0%)
Frame = -2
Query: 722 SLPHFHSSFLCCPLK-QPFSPSSRNRIQPKPTSYPRIRALEFDQNTVIAITVGVASVAIG 546
S P HS F+ CP+ P S S+RN P TSYPRI+A E D NTV+AI+VGVASVA+G
Sbjct: 7 SPPRLHSPFIHCPINFTPSSFSARNLRSPS-TSYPRIKA-ELDPNTVVAISVGVASVALG 64
Query: 545 IGIPVFYESQIDNAAKRDNTQPCFPCSGSGAQKCRFCLGTGNVTVELGGDEKEVSRCINC 366
IGIPVFYE+QIDNAAKR+NTQPCFPC+G+GAQKCR C+G+GNVTVELGG EKEVS CINC
Sbjct: 65 IGIPVFYETQIDNAAKRENTQPCFPCNGTGAQKCRLCVGSGNVTVELGGGEKEVSNCINC 124
Query: 365 DGAGSLTCTTCQGSGIQPRSLDRREFKDDD 276
DGAGSLTCTTCQGSG+QPR LDRREFKDDD
Sbjct: 125 DGAGSLTCTTCQGSGVQPRYLDRREFKDDD 154
>gb|AAF87111.1|AC006434_7 F10A5.12 [Arabidopsis thaliana]
Length = 199
Score = 211 bits (537), Expect = 9e-54
Identities = 106/144 (73%), Positives = 121/144 (83%), Gaps = 2/144 (1%)
Frame = -2
Query: 722 SLPHFHSSFLCCPLK-QPFSPSSRNRIQPKPTSYPRIRALEFDQNTVIAITVGVASVAIG 546
S P HS F+ CP+ P S S+RN P TSYPRI+A E D NTV+AI+VGVASVA+G
Sbjct: 7 SPPRLHSPFIHCPINFTPSSFSARNLRSPS-TSYPRIKA-ELDPNTVVAISVGVASVALG 64
Query: 545 IGIPVFYESQIDNAAKRDNTQPCFPCSGSGA-QKCRFCLGTGNVTVELGGDEKEVSRCIN 369
IGIPVFYE+QIDNAAKR+NTQPCFPC+G+GA +KCR C+G+GNVTVELGG EKEVS CIN
Sbjct: 65 IGIPVFYETQIDNAAKRENTQPCFPCNGTGAPEKCRLCVGSGNVTVELGGGEKEVSNCIN 124
Query: 368 CDGAGSLTCTTCQGSGIQPRSLDR 297
CDGAGSLTCTTCQGSG+QPR LDR
Sbjct: 125 CDGAGSLTCTTCQGSGVQPRYLDR 148
>ref|NP_181032.1| unknown protein; protein id: At2g34860.1, supported by cDNA:
gi_20466395 [Arabidopsis thaliana]
gi|7485815|pir||T00468 hypothetical protein At2g34860
[imported] - Arabidopsis thaliana
gi|3033382|gb|AAC12826.1| unknown protein [Arabidopsis
thaliana] gi|20466396|gb|AAM20515.1| unknown protein
[Arabidopsis thaliana] gi|22136346|gb|AAM91251.1|
unknown protein [Arabidopsis thaliana]
Length = 186
Score = 47.0 bits (110), Expect = 3e-04
Identities = 29/85 (34%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Frame = -2
Query: 563 ASVAIGIGIPVFYESQIDNAAKRDNTQPCFPCSGSGAQKCRFCLGTGN---VTVELGGDE 393
AS A+ F Q A + C C GSGA C C GTG + + D
Sbjct: 74 ASAALISNSYTFVSVQSAAALDKKPGGSCRNCQGSGAVLCDMCGGTGKWKALNRKRAKDV 133
Query: 392 KEVSRCINCDGAGSLTCTTCQGSGI 318
E + C NC G G L C C G+G+
Sbjct: 134 YEFTECPNCYGRGKLVCPVCLGTGL 158
>ref|NP_116638.1| involved in protection against heat-induced protein aggregation but
not necessary for protein import into the mitochondrion;
Mdj1p [Saccharomyces cerevisiae]
gi|462580|sp|P35191|MDJ1_YEAST MDJ1 protein,
mitochondrial precursor gi|481583|pir||S38898 heat shock
protein MDJ1 precursor - yeast (Saccharomyces
cerevisiae) gi|431910|emb|CAA82189.1| Mdj1p heat shock
protein [Saccharomyces cerevisiae]
gi|559936|emb|CAA86351.1| mdj1, len: 511, CAI: 0.17,
MDJ1_YEAST P35191 MDJ1 PROTEIN PRECURSOR [Saccharomyces
cerevisiae] gi|836738|dbj|BAA09222.1| MDJ1 protein
precursor [Saccharomyces cerevisiae]
Length = 511
Score = 46.6 bits (109), Expect = 4e-04
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 11/67 (16%)
Frame = -2
Query: 482 PCFPCSGSGAQ------KCRFCLGTGNVTVELGGDEKEVSRCINCDGAGSL-----TCTT 336
PC CSG+G + C C GTG TV + G + +S C C+G G++ CT
Sbjct: 229 PCSTCSGTGMKPNTHKVSCSTCHGTGT-TVHIRGGFQMMSTCPTCNGEGTMKRPQDNCTK 287
Query: 335 CQGSGIQ 315
C G G+Q
Sbjct: 288 CHGEGVQ 294
>ref|NP_658345.1| DnaJ_C, DnaJ C terminal region [Bacillus anthracis A2012]
Length = 371
Score = 46.2 bits (108), Expect = 5e-04
Identities = 26/66 (39%), Positives = 32/66 (48%), Gaps = 12/66 (18%)
Frame = -2
Query: 482 PCFPCSGSGA------QKCRFCLGTGNVTVELG---GDEKEVSRCINCDGAGSLT---CT 339
PC C GSGA + C+ C G+G V+VE G C +C G G + CT
Sbjct: 145 PCDTCKGSGAKPGTSKETCKHCSGSGQVSVEQNTPFGRIVNRQACSHCSGTGQMIKEKCT 204
Query: 338 TCQGSG 321
TC GSG
Sbjct: 205 TCHGSG 210
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 647,995,960
Number of Sequences: 1393205
Number of extensions: 14586952
Number of successful extensions: 40684
Number of sequences better than 10.0: 148
Number of HSP's better than 10.0 without gapping: 38236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40481
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 36032594816
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
