Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC019213A_C01 KMC019213A_c01
(529 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC50001.1| reversibly glycosylated polypeptide-2 [Arabidopsi... 85 5e-16
ref|NP_197069.1| reversibly glycosylated polypeptide-3; protein ... 85 5e-16
gb|AAM65020.1| reversibly glycosylated polypeptide-3 [Arabidopsi... 85 5e-16
emb|CAC84517.1| UDP-Glucose:protein transglucosylase [Solanum tu... 84 1e-15
gb|AAG17438.1|AF294725_1 reversibly glycosylated polypeptide [Or... 81 7e-15
>gb|AAC50001.1| reversibly glycosylated polypeptide-2 [Arabidopsis thaliana]
Length = 364
Score = 85.1 bits (209), Expect = 5e-16
Identities = 38/45 (84%), Positives = 41/45 (90%)
Frame = -2
Query: 528 QKCYIELSKQVKEKLSKIDPYFDKLADAMVTWIEAWDQLNPAGAS 394
Q+CYIELSK VKEKLS +DPYFDKLADAMVTWIEAWD+LNP AS
Sbjct: 313 QQCYIELSKMVKEKLSSLDPYFDKLADAMVTWIEAWDELNPPAAS 357
>ref|NP_197069.1| reversibly glycosylated polypeptide-3; protein id: At5g15650.1,
supported by cDNA: 35863., supported by cDNA:
gi_14532443, supported by cDNA: gi_2317730 [Arabidopsis
thaliana] gi|11281994|pir||T51394 reversibly
glycosylated polypeptide-3 - Arabidopsis thaliana
gi|9755610|emb|CAC01764.1| reversibly glycosylated
polypeptide-2 (AtRGB) [Arabidopsis thaliana]
gi|14532444|gb|AAK63950.1| AT5g15650/F14F8_30
[Arabidopsis thaliana] gi|21464559|gb|AAM52234.1|
AT5g15650/F14F8_30 [Arabidopsis thaliana]
Length = 360
Score = 85.1 bits (209), Expect = 5e-16
Identities = 38/45 (84%), Positives = 41/45 (90%)
Frame = -2
Query: 528 QKCYIELSKQVKEKLSKIDPYFDKLADAMVTWIEAWDQLNPAGAS 394
Q+CYIELSK VKEKLS +DPYFDKLADAMVTWIEAWD+LNP AS
Sbjct: 313 QQCYIELSKMVKEKLSSLDPYFDKLADAMVTWIEAWDELNPPAAS 357
>gb|AAM65020.1| reversibly glycosylated polypeptide-3 [Arabidopsis thaliana]
Length = 360
Score = 85.1 bits (209), Expect = 5e-16
Identities = 38/45 (84%), Positives = 41/45 (90%)
Frame = -2
Query: 528 QKCYIELSKQVKEKLSKIDPYFDKLADAMVTWIEAWDQLNPAGAS 394
Q+CYIELSK VKEKLS +DPYFDKLADAMVTWIEAWD+LNP AS
Sbjct: 313 QQCYIELSKMVKEKLSSLDPYFDKLADAMVTWIEAWDELNPPAAS 357
>emb|CAC84517.1| UDP-Glucose:protein transglucosylase [Solanum tuberosum]
Length = 366
Score = 83.6 bits (205), Expect = 1e-15
Identities = 37/43 (86%), Positives = 40/43 (92%)
Frame = -2
Query: 528 QKCYIELSKQVKEKLSKIDPYFDKLADAMVTWIEAWDQLNPAG 400
Q+CY+ELSKQVKEKLS IDPYF KLADAMVTWIEAWD+LNP G
Sbjct: 307 QQCYLELSKQVKEKLSTIDPYFTKLADAMVTWIEAWDELNPTG 349
>gb|AAG17438.1|AF294725_1 reversibly glycosylated polypeptide [Oryza sativa]
gi|22795245|gb|AAN08217.1| reversibly glycosylated
polypeptide [Oryza sativa (japonica cultivar-group)]
Length = 364
Score = 81.3 bits (199), Expect = 7e-15
Identities = 36/51 (70%), Positives = 44/51 (85%)
Frame = -2
Query: 528 QKCYIELSKQVKEKLSKIDPYFDKLADAMVTWIEAWDQLNPAGASEANDQA 376
QKCY+ L++QV+EKL KIDPYF KLADAMVTWIEAWD+LNP+ A+ N +A
Sbjct: 313 QKCYLSLAEQVREKLGKIDPYFVKLADAMVTWIEAWDELNPSTAAVENGKA 363
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 382,967,245
Number of Sequences: 1393205
Number of extensions: 7093219
Number of successful extensions: 18924
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 18475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18920
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17308240320
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
