Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC019135A_C01 KMC019135A_c01
(936 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||H86278 F14L17.20 protein - Arabidopsis thaliana gi|7262685|... 256 3e-67
ref|NP_172895.1| hypothetical protein; protein id: At1g14430.1 [... 256 3e-67
ref|NP_191321.1| putative protein; protein id: At3g57620.1 [Arab... 256 5e-67
ref|NP_177692.1| unknown protein; protein id: At1g75620.1 [Arabi... 243 4e-63
ref|NP_173419.1| unknown protein; protein id: At1g19900.1, suppo... 238 1e-61
>pir||H86278 F14L17.20 protein - Arabidopsis thaliana
gi|7262685|gb|AAF43943.1|AC012188_20 Weak similarity to
glyoxal oxidase (glx2) from Phanerochaete chrysosporium
gb|L47287. [Arabidopsis thaliana]
Length = 564
Score = 256 bits (654), Expect = 3e-67
Identities = 141/312 (45%), Positives = 191/312 (61%), Gaps = 8/312 (2%)
Frame = +2
Query: 14 LQQIMITILLFLLCAGFSHGAKNEGSLEGRKGQWQMLLNNTGVVGMHTALTSKNTIIMFD 193
L ++I+ F LC+ G+W +L + G+ MH L N +++FD
Sbjct: 10 LNAVVISFFFFFLCSTSDLLLPRSPLAILTGGRWDLLQPSVGISAMHMQLLHNNKVVIFD 69
Query: 194 QTEAGPSGYPLHKRFNGSRCNTRSHNDVVDSTCYAHSVEYDISANRVRPLRLDSDPWCSS 373
+T+ GPS L + T + V D C AHS+ YD+++N RPL L D WCSS
Sbjct: 70 RTDYGPSNVSLPSQ-------TCQNATVFD--CSAHSILYDVASNTFRPLTLRYDTWCSS 120
Query: 374 GSFLSNGTLLQTGGYGRGAKRIRFYRPC----GNHQCHWIQSRKSLSDERWYASSQILPD 541
GS ++G+L+QTGGYG G + +R + PC G+ C WI++R LS RWY+++QILPD
Sbjct: 121 GSLNASGSLIQTGGYGNGERTVRVFTPCDGGVGSVSCDWIENRAYLSSRRWYSTNQILPD 180
Query: 542 HDRVVIVGGRRTFTYEFIPKISPTEKSFDLPFLHKTNERNAKGNNLYPFLHLSSDGNLFI 721
R++IVGGRR F YEF PK P E F+L FL +T + N + NNLYPFLHL DGNLFI
Sbjct: 181 -GRIIIVGGRRAFNYEFYPK-DPGESVFNLRFLAETRDPNEE-NNLYPFLHLLPDGNLFI 237
Query: 722 FANRDSILLNPRRNRVIKTFPRIPGDGSRNYPSSGSSVMLPLDHSDNFHK----VEVMVC 889
FANR SIL + +R+IK FP+IPG RNYPS+GSSV+LPL + + ++ EVMVC
Sbjct: 238 FANRRSILFDFVNHRIIKEFPQIPGGDKRNYPSTGSSVLLPLFLTGDINRTKITAEVMVC 297
Query: 890 GGSATGALRAAS 925
GG+ GA A+
Sbjct: 298 GGAPPGAFFKAA 309
>ref|NP_172895.1| hypothetical protein; protein id: At1g14430.1 [Arabidopsis
thaliana]
Length = 849
Score = 256 bits (654), Expect = 3e-67
Identities = 141/312 (45%), Positives = 191/312 (61%), Gaps = 8/312 (2%)
Frame = +2
Query: 14 LQQIMITILLFLLCAGFSHGAKNEGSLEGRKGQWQMLLNNTGVVGMHTALTSKNTIIMFD 193
L ++I+ F LC+ G+W +L + G+ MH L N +++FD
Sbjct: 10 LNAVVISFFFFFLCSTSDLLLPRSPLAILTGGRWDLLQPSVGISAMHMQLLHNNKVVIFD 69
Query: 194 QTEAGPSGYPLHKRFNGSRCNTRSHNDVVDSTCYAHSVEYDISANRVRPLRLDSDPWCSS 373
+T+ GPS L + T + V D C AHS+ YD+++N RPL L D WCSS
Sbjct: 70 RTDYGPSNVSLPSQ-------TCQNATVFD--CSAHSILYDVASNTFRPLTLRYDTWCSS 120
Query: 374 GSFLSNGTLLQTGGYGRGAKRIRFYRPC----GNHQCHWIQSRKSLSDERWYASSQILPD 541
GS ++G+L+QTGGYG G + +R + PC G+ C WI++R LS RWY+++QILPD
Sbjct: 121 GSLNASGSLIQTGGYGNGERTVRVFTPCDGGVGSVSCDWIENRAYLSSRRWYSTNQILPD 180
Query: 542 HDRVVIVGGRRTFTYEFIPKISPTEKSFDLPFLHKTNERNAKGNNLYPFLHLSSDGNLFI 721
R++IVGGRR F YEF PK P E F+L FL +T + N + NNLYPFLHL DGNLFI
Sbjct: 181 -GRIIIVGGRRAFNYEFYPK-DPGESVFNLRFLAETRDPNEE-NNLYPFLHLLPDGNLFI 237
Query: 722 FANRDSILLNPRRNRVIKTFPRIPGDGSRNYPSSGSSVMLPLDHSDNFHK----VEVMVC 889
FANR SIL + +R+IK FP+IPG RNYPS+GSSV+LPL + + ++ EVMVC
Sbjct: 238 FANRRSILFDFVNHRIIKEFPQIPGGDKRNYPSTGSSVLLPLFLTGDINRTKITAEVMVC 297
Query: 890 GGSATGALRAAS 925
GG+ GA A+
Sbjct: 298 GGAPPGAFFKAA 309
>ref|NP_191321.1| putative protein; protein id: At3g57620.1 [Arabidopsis thaliana]
gi|7485502|pir||T06758 probable galactose oxidase (EC
1.1.3.9) F15B8.190 [similarity] - Arabidopsis thaliana
gi|4678285|emb|CAB41193.1| putative protein [Arabidopsis
thaliana]
Length = 547
Score = 256 bits (653), Expect = 5e-67
Identities = 136/305 (44%), Positives = 185/305 (60%), Gaps = 2/305 (0%)
Frame = +2
Query: 23 IMITILLFLLCAGFSHGAKNEGSLEGRKGQWQMLLNNTGVVGMHTALTSKNTIIMFDQTE 202
I+ T +L L A S G N L+ +W+MLL + G+ MH L +IMFD+T+
Sbjct: 9 IVATTILCLSMAILSEGQANPFLLQ--LDRWEMLLPSIGISAMHMQLLHNGMVIMFDRTD 66
Query: 203 AGPSGYPLHKRFNGSRCNTRSHNDVVDSTCYAHSVEYDISANRVRPLRLDSDPWCSSGSF 382
G S L G C + C AHSV YD+ +N RPL + +D WCSSG+
Sbjct: 67 FGTSNVSLP----GGICRYDPTDTAEKFDCSAHSVLYDVVSNTYRPLNVQTDTWCSSGAV 122
Query: 383 LSNGTLLQTGGYGRGAKRIRFYRPCG-NHQCHWIQSRKSLSDERWYASSQILPDHDRVVI 559
L NGTL+QTGGY G + R + PCG + C WI+ + LS RWYA++QILPD R+++
Sbjct: 123 LPNGTLVQTGGYNDGERAARMFSPCGYSDTCDWIEFPQYLSQRRWYATNQILPD-GRIIV 181
Query: 560 VGGRRTFTYEFIPKISPTEKSFDLPFLHKTNERNAKGNNLYPFLHLSSDGNLFIFANRDS 739
VGGRR F YE P+ +S L FL +T++ + NNLYPF+HL DGNLF+FAN S
Sbjct: 182 VGGRRQFNYELFPRHDSRSRSSRLEFLRETSD-GSNENNLYPFIHLLPDGNLFVFANTRS 240
Query: 740 ILLNPRRNRVIKTFPRIPGDGSRNYPSSGSSVMLPLDHSDNFH-KVEVMVCGGSATGALR 916
I+ + ++NR++K FP IPG RNYPSSGSS++ PLD +++ + +VE+MVCGGS G
Sbjct: 241 IVFDYKKNRIVKEFPEIPGGDPRNYPSSGSSILFPLDDTNDANVEVEIMVCGGSPKGGFS 300
Query: 917 AASNR 931
R
Sbjct: 301 RGFTR 305
>ref|NP_177692.1| unknown protein; protein id: At1g75620.1 [Arabidopsis thaliana]
gi|9369366|gb|AAF87115.1|AC006434_11 F10A5.18
[Arabidopsis thaliana]
Length = 547
Score = 243 bits (619), Expect = 4e-63
Identities = 123/271 (45%), Positives = 177/271 (64%)
Frame = +2
Query: 98 GRKGQWQMLLNNTGVVGMHTALTSKNTIIMFDQTEAGPSGYPLHKRFNGSRCNTRSHNDV 277
G +G W++LL N G+ MH+ L + +IM+D+T GPS L NG+ C + + V
Sbjct: 32 GDEGTWELLLPNVGISAMHSQLLHNDRVIMYDRTNFGPSNISLP---NGA-CRSSPGDAV 87
Query: 278 VDSTCYAHSVEYDISANRVRPLRLDSDPWCSSGSFLSNGTLLQTGGYGRGAKRIRFYRPC 457
+ C AHSVEYD++ NR+RPL + S+ WCSSG +GTLLQTGG G +++R PC
Sbjct: 88 SKTDCTAHSVEYDVALNRIRPLTVQSNTWCSSGGVTPDGTLLQTGGDLDGERKVRLMDPC 147
Query: 458 GNHQCHWIQSRKSLSDERWYASSQILPDHDRVVIVGGRRTFTYEFIPKISPTEKSFDLPF 637
++ C WI+ L+ RWYA++ ILPD R +I+GGR F YEF PK + + +PF
Sbjct: 148 DDNSCDWIEVDNGLAARRWYATNHILPD-GRQIIIGGRGQFNYEFFPKTN-APNFYSIPF 205
Query: 638 LHKTNERNAKGNNLYPFLHLSSDGNLFIFANRDSILLNPRRNRVIKTFPRIPGDGSRNYP 817
L +TN+ + NNLYPF+ L++DGNLFIFAN +ILL+ N V++T+P IPG R+YP
Sbjct: 206 LSETNDPGDE-NNLYPFVFLNTDGNLFIFANNRAILLDYSTNTVVRTYPEIPGGDPRSYP 264
Query: 818 SSGSSVMLPLDHSDNFHKVEVMVCGGSATGA 910
S+GS+V+LP+ + +EV+VCGG+ G+
Sbjct: 265 STGSAVLLPIKNL----VLEVLVCGGAPKGS 291
>ref|NP_173419.1| unknown protein; protein id: At1g19900.1, supported by cDNA:
gi_16604506 [Arabidopsis thaliana]
gi|16604507|gb|AAL24259.1| At1g19900/F6F9_4 [Arabidopsis
thaliana]
Length = 548
Score = 238 bits (607), Expect = 1e-61
Identities = 127/305 (41%), Positives = 184/305 (59%), Gaps = 2/305 (0%)
Frame = +2
Query: 23 IMITILLFLLCAGFSHGAKNEGSLEGRKGQWQMLLNNTGVVGMHTALTSKNTIIMFDQTE 202
+ +T L FLL S A+ G W+ + N G+ MH L + ++M+D+T
Sbjct: 12 LFLTTLQFLLTHHVSSAAR---------GLWKYIAPNVGISAMHMQLLHNDRVVMYDRTN 62
Query: 203 AGPSGYPLHKRFNGSRCNTRSHNDVVDSTCYAHSVEYDISANRVRPLRLDSDPWCSSGSF 382
GPS L NG+ C + V C AHS+EYD++ N +RPL + S+ WCSSGS
Sbjct: 63 FGPSNISLP---NGN-CRDNPQDAVSKIDCTAHSIEYDVATNTIRPLTVQSNTWCSSGSV 118
Query: 383 LSNGTLLQTGGYGRGAKRIRFYRPCGNHQCHWIQSRKSLSDERWYASSQILPDHDRVVIV 562
+G L+QTGG G + R + PC N+QC W++ L RWYAS+ ILPD + +++
Sbjct: 119 RPDGVLVQTGGDRDGELKTRTFSPCNNNQCDWVEMNNGLKKRRWYASNHILPD-GKQIVM 177
Query: 563 GGRRTFTYEFIPKISPTEKSFDLPFLHKTNERNAKGNNLYPFLHLSSDGNLFIFANRDSI 742
GG+ F YEF PK + LPFL +T+++ + NNLYPF+ +++DGNLF+FAN +I
Sbjct: 178 GGQGQFNYEFFPK-TTNPNVVALPFLAETHDQGQE-NNLYPFVFMNTDGNLFMFANNRAI 235
Query: 743 LLNPRRNRVIKTFPRIPGDGSRNYPSSGSSVMLPLDH--SDNFHKVEVMVCGGSATGALR 916
LL+ +N V+KTFP IPG RNYPS+GS+V+LPL + +DN + EV+VCGG+ G+
Sbjct: 236 LLDYVKNTVVKTFPAIPGGDPRNYPSTGSAVLLPLKNLEADNV-ETEVLVCGGAPKGSYN 294
Query: 917 AASNR 931
A +
Sbjct: 295 LARKK 299
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 893,687,486
Number of Sequences: 1393205
Number of extensions: 21525782
Number of successful extensions: 64538
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 59667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 64449
length of database: 448,689,247
effective HSP length: 123
effective length of database: 277,325,032
effective search space used: 52137106016
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
