Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC019130A_C01 KMC019130A_c01
(556 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_175700.1| putative G protein-coupled receptor; protein id... 127 7e-29
gb|AAL58268.1|AC068923_10 putative lanthionine synthetase [Oryza... 127 9e-29
ref|NP_179670.2| hypothetical protein; protein id: At2g20770.1, ... 119 2e-26
pir||B84593 hypothetical protein At2g20770 [imported] - Arabidop... 119 2e-26
gb|AAF75794.1|AF272710_1 putative 7-transmembrane G-protein-coup... 93 2e-18
>ref|NP_175700.1| putative G protein-coupled receptor; protein id: At1g52920.1
[Arabidopsis thaliana] gi|25405614|pir||E96570
hypothetical protein F14G24.19 [imported] - Arabidopsis
thaliana gi|12324628|gb|AAG52264.1|AC019018_1 putative G
protein-coupled receptor; 80093-78432 [Arabidopsis
thaliana]
Length = 401
Score = 127 bits (320), Expect = 7e-29
Identities = 66/103 (64%), Positives = 78/103 (75%), Gaps = 5/103 (4%)
Frame = -1
Query: 550 AAMELGERIWKRGWPKHVGICHGISGNAYVFLSLYQLTGDLKYLYGAKAFACLALDRALV 371
AAME GE +W RG K VGICHGISGN YVFLSLY+LT + KYLY AKAFA LD++
Sbjct: 299 AAMEAGEVVWSRGLLKRVGICHGISGNTYVFLSLYRLTRNPKYLYRAKAFASFLLDKSEK 358
Query: 370 LITQ-----GDRLYSLFEGIGGLAYLLLDMVDLSQSKFPAYEL 257
LI++ GDR +SLFEGIGG+AY+LLDM D +Q+ FP YEL
Sbjct: 359 LISEGQMHGGDRPFSLFEGIGGMAYMLLDMNDPTQALFPGYEL 401
>gb|AAL58268.1|AC068923_10 putative lanthionine synthetase [Oryza sativa (japonica
cultivar-group)]
Length = 446
Score = 127 bits (319), Expect = 9e-29
Identities = 65/102 (63%), Positives = 76/102 (73%), Gaps = 5/102 (4%)
Frame = -1
Query: 547 AMELGERIWKRGWPKHVGICHGISGNAYVFLSLYQLTGDLKYLYGAKAFACLALDRALVL 368
A E E +W RG K VGICHG+SGNAYVFLSLY+LTG+++YLY AKAFAC L++A L
Sbjct: 345 AAEAAEVVWNRGLLKRVGICHGVSGNAYVFLSLYRLTGNVEYLYRAKAFACFLLEKADQL 404
Query: 367 ITQ-----GDRLYSLFEGIGGLAYLLLDMVDLSQSKFPAYEL 257
I GD +SLFEG G+AYLLLDMV S+SKFPAYEL
Sbjct: 405 IADGAMHGGDHPFSLFEGRAGMAYLLLDMVSPSESKFPAYEL 446
>ref|NP_179670.2| hypothetical protein; protein id: At2g20770.1, supported by cDNA:
gi_17380955, supported by cDNA: gi_20465390 [Arabidopsis
thaliana] gi|17380956|gb|AAL36290.1| unknown protein
[Arabidopsis thaliana] gi|20465391|gb|AAM20120.1|
unknown protein [Arabidopsis thaliana]
Length = 405
Score = 119 bits (298), Expect = 2e-26
Identities = 61/105 (58%), Positives = 74/105 (70%), Gaps = 5/105 (4%)
Frame = -1
Query: 556 LGAAMELGERIWKRGWPKHVGICHGISGNAYVFLSLYQLTGDLKYLYGAKAFACLALDRA 377
L A+ E +W RG K VGICHGISGNAYVFL+LY+ TG +YLY AKAFA LDR
Sbjct: 301 LEASAAAAEVVWNRGLLKRVGICHGISGNAYVFLALYRATGRSEYLYRAKAFASFLLDRG 360
Query: 376 LVLITQ-----GDRLYSLFEGIGGLAYLLLDMVDLSQSKFPAYEL 257
L+++ GD YSLFEG+ G+AYL LDMVD S+++FP YEL
Sbjct: 361 PKLLSKGEMHGGDSPYSLFEGVAGMAYLFLDMVDPSEARFPGYEL 405
>pir||B84593 hypothetical protein At2g20770 [imported] - Arabidopsis thaliana
gi|4454471|gb|AAD20918.1| hypothetical protein
[Arabidopsis thaliana]
Length = 371
Score = 119 bits (298), Expect = 2e-26
Identities = 61/105 (58%), Positives = 74/105 (70%), Gaps = 5/105 (4%)
Frame = -1
Query: 556 LGAAMELGERIWKRGWPKHVGICHGISGNAYVFLSLYQLTGDLKYLYGAKAFACLALDRA 377
L A+ E +W RG K VGICHGISGNAYVFL+LY+ TG +YLY AKAFA LDR
Sbjct: 267 LEASAAAAEVVWNRGLLKRVGICHGISGNAYVFLALYRATGRSEYLYRAKAFASFLLDRG 326
Query: 376 LVLITQ-----GDRLYSLFEGIGGLAYLLLDMVDLSQSKFPAYEL 257
L+++ GD YSLFEG+ G+AYL LDMVD S+++FP YEL
Sbjct: 327 PKLLSKGEMHGGDSPYSLFEGVAGMAYLFLDMVDPSEARFPGYEL 371
>gb|AAF75794.1|AF272710_1 putative 7-transmembrane G-protein-coupled receptor [Solanum
chacoense]
Length = 424
Score = 92.8 bits (229), Expect = 2e-18
Identities = 49/104 (47%), Positives = 64/104 (61%), Gaps = 5/104 (4%)
Frame = -1
Query: 553 GAAMELGERIWKRGWPKHVGICHGISGNAYVFLSLYQLTGDLKYLYGAKAFACLALDRAL 374
GAA+E GE +WK G + VG+ G SGNAY FLSLY+LTG+ Y AKAFA A
Sbjct: 321 GAAIEGGEVVWKSGLVERVGLADGASGNAYAFLSLYRLTGESIYEERAKAFASCLYQNAR 380
Query: 373 VLI-----TQGDRLYSLFEGIGGLAYLLLDMVDLSQSKFPAYEL 257
++ + D YSLF+G+GG+A L D++ S+FP YEL
Sbjct: 381 TIMNERHHNEADHSYSLFQGLGGVACFLFDLLAPKNSRFPGYEL 424
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 472,140,079
Number of Sequences: 1393205
Number of extensions: 9956813
Number of successful extensions: 19105
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 18622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19071
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 19521267756
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
