Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC019033A_C01 KMC019033A_c01
(556 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK62600.1| AT3g62770/F26K9_200 [Arabidopsis thaliana] gi|163... 148 5e-35
pir||T48066 hypothetical protein F26K9.200 - Arabidopsis thalian... 141 6e-33
dbj|BAB93248.1| P0423A12.19 [Oryza sativa (japonica cultivar-gro... 126 2e-28
dbj|BAC42353.1| unknown protein [Arabidopsis thaliana] 111 7e-24
ref|NP_181613.1| hypothetical protein; protein id: At2g40810.1 [... 111 7e-24
>gb|AAK62600.1| AT3g62770/F26K9_200 [Arabidopsis thaliana]
gi|16323362|gb|AAL15394.1| AT3g62770/F26K9_200
[Arabidopsis thaliana]
Length = 425
Score = 148 bits (373), Expect = 5e-35
Identities = 75/112 (66%), Positives = 82/112 (72%)
Frame = -2
Query: 555 GTVHVFSLKVNSSVPAEHGKSQSSSNSDPTAAPSSSSRSFIKFKGVLPQYFSSEWSVAQF 376
GTVHVF LKVNS + + SS P A PSS S S FKGVLP+YFSSEWSVAQF
Sbjct: 315 GTVHVFGLKVNSG-----SQVKDSSRIAPDATPSSPSSSLSLFKGVLPRYFSSEWSVAQF 369
Query: 375 HLPEGTHYTVAFGLPKNTVIILGMDGSYYRCPFDPAHGGEMAQLEYHNFLKP 220
L EGT Y AFG KNTV+ILGMDGS+YRC FDP +GGEM+QLEYHN LKP
Sbjct: 370 RLVEGTQYIAAFGHQKNTVVILGMDGSFYRCQFDPVNGGEMSQLEYHNCLKP 421
>pir||T48066 hypothetical protein F26K9.200 - Arabidopsis thaliana
gi|7362757|emb|CAB83127.1| putative protein [Arabidopsis
thaliana]
Length = 432
Score = 141 bits (355), Expect = 6e-33
Identities = 74/112 (66%), Positives = 81/112 (72%)
Frame = -2
Query: 555 GTVHVFSLKVNSSVPAEHGKSQSSSNSDPTAAPSSSSRSFIKFKGVLPQYFSSEWSVAQF 376
GTVHVF LKVNS + + SS P A PSS S S FK VLP+YFSSEWSVAQF
Sbjct: 323 GTVHVFGLKVNSG-----SQVKDSSRIAPDATPSSPSSSLSLFK-VLPRYFSSEWSVAQF 376
Query: 375 HLPEGTHYTVAFGLPKNTVIILGMDGSYYRCPFDPAHGGEMAQLEYHNFLKP 220
L EGT Y AFG KNTV+ILGMDGS+YRC FDP +GGEM+QLEYHN LKP
Sbjct: 377 RLVEGTQYIAAFGHQKNTVVILGMDGSFYRCQFDPVNGGEMSQLEYHNCLKP 428
>dbj|BAB93248.1| P0423A12.19 [Oryza sativa (japonica cultivar-group)]
Length = 457
Score = 126 bits (317), Expect = 2e-28
Identities = 65/115 (56%), Positives = 78/115 (67%)
Frame = -2
Query: 555 GTVHVFSLKVNSSVPAEHGKSQSSSNSDPTAAPSSSSRSFIKFKGVLPQYFSSEWSVAQF 376
GT+HVF+LK+N + + DP S S SFIK GVLP+YF SEWSVAQF
Sbjct: 345 GTIHVFNLKINVGLTTN---DKPLPAPDPDVPHISPSLSFIK--GVLPKYFHSEWSVAQF 399
Query: 375 HLPEGTHYTVAFGLPKNTVIILGMDGSYYRCPFDPAHGGEMAQLEYHNFLKPETE 211
L EG Y VAFG KNTV ++GMDGS+YRC FDP +GGEM QLE +NFLKP ++
Sbjct: 400 RLHEGEQYIVAFGHEKNTVAVVGMDGSFYRCQFDPVNGGEMLQLECYNFLKPSSD 454
>dbj|BAC42353.1| unknown protein [Arabidopsis thaliana]
Length = 393
Score = 111 bits (277), Expect = 7e-24
Identities = 66/124 (53%), Positives = 81/124 (65%), Gaps = 13/124 (10%)
Frame = -2
Query: 555 GTVHVFSLKVN----SSVPAEHGK---SQSSSNS-----DPTAAPS-SSSRSFIKFKGVL 415
GTVH+FSL+V S E+G Q+ SNS PT + SS SF++ GVL
Sbjct: 268 GTVHIFSLRVRVVGEDSYSTENGALLTQQNYSNSLQGLVSPTIGTNPGSSLSFMR--GVL 325
Query: 414 PQYFSSEWSVAQFHLPEGTHYTVAFGLPKNTVIILGMDGSYYRCPFDPAHGGEMAQLEYH 235
P+YFSSEWS AQFH+ E T + AFG NTV I+GMDGS+YRC FDP +GGEM QLEY
Sbjct: 326 PKYFSSEWSYAQFHVSEVTQFFAAFG-SNNTVAIIGMDGSFYRCSFDPVNGGEMGQLEYI 384
Query: 234 NFLK 223
+F+K
Sbjct: 385 HFMK 388
>ref|NP_181613.1| hypothetical protein; protein id: At2g40810.1 [Arabidopsis
thaliana] gi|7487233|pir||T00745 hypothetical protein
At2g40810 [imported] - Arabidopsis thaliana
gi|2623295|gb|AAB86441.1| hypothetical protein
[Arabidopsis thaliana]
Length = 369
Score = 111 bits (277), Expect = 7e-24
Identities = 66/124 (53%), Positives = 81/124 (65%), Gaps = 13/124 (10%)
Frame = -2
Query: 555 GTVHVFSLKVN----SSVPAEHGK---SQSSSNS-----DPTAAPS-SSSRSFIKFKGVL 415
GTVH+FSL+V S E+G Q+ SNS PT + SS SF++ GVL
Sbjct: 244 GTVHIFSLRVRVVGEDSYSTENGALLTQQNYSNSLQGLVSPTIGTNPGSSLSFMR--GVL 301
Query: 414 PQYFSSEWSVAQFHLPEGTHYTVAFGLPKNTVIILGMDGSYYRCPFDPAHGGEMAQLEYH 235
P+YFSSEWS AQFH+ E T + AFG NTV I+GMDGS+YRC FDP +GGEM QLEY
Sbjct: 302 PKYFSSEWSYAQFHVSEVTQFFAAFG-SNNTVAIIGMDGSFYRCSFDPVNGGEMGQLEYI 360
Query: 234 NFLK 223
+F+K
Sbjct: 361 HFMK 364
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 470,338,426
Number of Sequences: 1393205
Number of extensions: 9933417
Number of successful extensions: 35463
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 29887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33504
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 19521267756
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
