Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC018846A_C01 KMC018846A_c01
(460 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC43357.1| putative nucellin [Arabidopsis thaliana] 87 8e-17
ref|NP_567922.1| nucellin -like protein; protein id: At4g33490.1... 87 8e-17
ref|NP_175079.1| nucellin, putative; protein id: At1g44130.1 [Ar... 83 1e-15
pir||T06000 aspartic proteinase homolog F17M5.250 - Arabidopsis ... 80 1e-14
pir||B96804 nucellin-like protein, 27671-25467 [imported] - Arab... 79 2e-14
>dbj|BAC43357.1| putative nucellin [Arabidopsis thaliana]
Length = 413
Score = 87.0 bits (214), Expect = 8e-17
Identities = 40/57 (70%), Positives = 47/57 (82%)
Frame = -3
Query: 455 YLIISNFGNVCLGILNGPEVGLGELNLIGDISMQDKVMVFDNEKLSIGWGAADCDRV 285
YLIIS GNVCLGILNG E+GL LNLIGDISMQD+++++DNEK SIGW DCD +
Sbjct: 346 YLIISMKGNVCLGILNGTEIGLQNLNLIGDISMQDQMIIYDNEKQSIGWMPVDCDEL 402
>ref|NP_567922.1| nucellin -like protein; protein id: At4g33490.1, supported by cDNA:
24738. [Arabidopsis thaliana] gi|21592493|gb|AAM64443.1|
nucellin-like protein [Arabidopsis thaliana]
Length = 425
Score = 87.0 bits (214), Expect = 8e-17
Identities = 40/57 (70%), Positives = 47/57 (82%)
Frame = -3
Query: 455 YLIISNFGNVCLGILNGPEVGLGELNLIGDISMQDKVMVFDNEKLSIGWGAADCDRV 285
YLIIS GNVCLGILNG E+GL LNLIGDISMQD+++++DNEK SIGW DCD +
Sbjct: 358 YLIISMKGNVCLGILNGTEIGLQNLNLIGDISMQDQMIIYDNEKQSIGWMPVDCDEL 414
>ref|NP_175079.1| nucellin, putative; protein id: At1g44130.1 [Arabidopsis thaliana]
gi|25350205|pir||F96505 probable nucellin [imported] -
Arabidopsis thaliana
gi|12320825|gb|AAG50556.1|AC074228_11 nucellin, putative
[Arabidopsis thaliana]
Length = 405
Score = 83.2 bits (204), Expect = 1e-15
Identities = 35/60 (58%), Positives = 49/60 (81%)
Frame = -3
Query: 455 YLIISNFGNVCLGILNGPEVGLGELNLIGDISMQDKVMVFDNEKLSIGWGAADCDRVPRS 276
YLI+S GNVCLG+LNG EVGL N+IGDISMQ +M++DNEK +GW ++DC+++P++
Sbjct: 346 YLIVSKTGNVCLGLLNGSEVGLQNSNVIGDISMQGLMMIYDNEKQQLGWVSSDCNKLPKT 405
>pir||T06000 aspartic proteinase homolog F17M5.250 - Arabidopsis thaliana
gi|4490316|emb|CAB38807.1| nucellin-like protein
[Arabidopsis thaliana] gi|7270297|emb|CAB80066.1|
nucellin-like protein [Arabidopsis thaliana]
Length = 420
Score = 80.1 bits (196), Expect = 1e-14
Identities = 35/50 (70%), Positives = 42/50 (84%)
Frame = -3
Query: 434 GNVCLGILNGPEVGLGELNLIGDISMQDKVMVFDNEKLSIGWGAADCDRV 285
GNVCLGILNG E+GL LNLIGDISMQD+++++DNEK SIGW DCD +
Sbjct: 360 GNVCLGILNGTEIGLQNLNLIGDISMQDQMIIYDNEKQSIGWMPVDCDEL 409
>pir||B96804 nucellin-like protein, 27671-25467 [imported] - Arabidopsis
thaliana gi|12323376|gb|AAG51657.1|AC010704_1
nucellin-like protein; 27671-25467 [Arabidopsis
thaliana]
Length = 427
Score = 79.3 bits (194), Expect = 2e-14
Identities = 35/60 (58%), Positives = 47/60 (78%)
Frame = -3
Query: 455 YLIISNFGNVCLGILNGPEVGLGELNLIGDISMQDKVMVFDNEKLSIGWGAADCDRVPRS 276
YLII+ G VCLGILNG E+GL N+IGDIS Q ++++DNEK IGW ++DCD++P+S
Sbjct: 361 YLIITEKGRVCLGILNGTEIGLEGYNIIGDISFQGIMVIYDNEKQRIGWISSDCDKLPKS 420
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 392,558,417
Number of Sequences: 1393205
Number of extensions: 7833823
Number of successful extensions: 17118
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 16719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17111
length of database: 448,689,247
effective HSP length: 112
effective length of database: 292,650,287
effective search space used: 11706011480
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
