Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC018511A_C01 KMC018511A_c01
(549 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC43000.1| unknown protein [Arabidopsis thaliana] 150 7e-36
ref|NP_567175.1| hypothetical protein; protein id: At4g00370.1 [... 150 7e-36
dbj|BAA87831.1| unnamed protein product [Oryza sativa (japonica ... 149 2e-35
gb|AAL32642.1| putative Na+-dependent inorganic phosphate cotran... 134 6e-31
ref|NP_180526.1| putative Na+-dependent inorganic phosphate cotr... 134 6e-31
>dbj|BAC43000.1| unknown protein [Arabidopsis thaliana]
Length = 541
Score = 150 bits (380), Expect = 7e-36
Identities = 72/77 (93%), Positives = 76/77 (98%)
Frame = -2
Query: 548 SQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWNDVFKVAVVLYI 369
SQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSW+DVFKVAV LY+
Sbjct: 465 SQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVALYL 524
Query: 368 IGTLVWNIFSTGEKILD 318
IGTLVWN+F+TGEKILD
Sbjct: 525 IGTLVWNLFATGEKILD 541
>ref|NP_567175.1| hypothetical protein; protein id: At4g00370.1 [Arabidopsis
thaliana] gi|7485271|pir||T01534 hypothetical protein
A_IG005I10.nn - Arabidopsis thaliana
gi|2252847|gb|AAB62846.1| A_IG005I10.nn gene product
[Arabidopsis thaliana]
gi|6049889|gb|AAF02804.1|AF195115_24 weak similarity to
phthalate permease family [Arabidopsis thaliana]
gi|7267124|emb|CAB80795.1| similarity to~contains EST
gb:AI995872.1 [Arabidopsis thaliana]
Length = 413
Score = 150 bits (380), Expect = 7e-36
Identities = 72/77 (93%), Positives = 76/77 (98%)
Frame = -2
Query: 548 SQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWNDVFKVAVVLYI 369
SQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSW+DVFKVAV LY+
Sbjct: 337 SQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWDDVFKVAVALYL 396
Query: 368 IGTLVWNIFSTGEKILD 318
IGTLVWN+F+TGEKILD
Sbjct: 397 IGTLVWNLFATGEKILD 413
>dbj|BAA87831.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
gi|11138056|dbj|BAB17729.1| putative Na+-dependen
inorganic phosphate cotransporter [Oryza sativa
(japonica cultivar-group)]
Length = 529
Score = 149 bits (376), Expect = 2e-35
Identities = 70/77 (90%), Positives = 76/77 (97%)
Frame = -2
Query: 548 SQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWNDVFKVAVVLYI 369
SQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ GSW+DVFKV+VVLY+
Sbjct: 453 SQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQHGSWDDVFKVSVVLYL 512
Query: 368 IGTLVWNIFSTGEKILD 318
+GTLVWN+FSTGEKI+D
Sbjct: 513 VGTLVWNLFSTGEKIID 529
>gb|AAL32642.1| putative Na+-dependent inorganic phosphate cotransporter
[Arabidopsis thaliana] gi|21387197|gb|AAM48002.1|
putative Na+-dependent inorganic phosphate cotransporter
[Arabidopsis thaliana]
Length = 512
Score = 134 bits (338), Expect = 6e-31
Identities = 61/77 (79%), Positives = 72/77 (93%)
Frame = -2
Query: 548 SQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWNDVFKVAVVLYI 369
SQSGLYSNHQDI PRY+GVLLGLSNTAGVLAGV GTAATG+ILQ GSW+DVF ++V LY+
Sbjct: 436 SQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVLGTAATGHILQHGSWDDVFTISVGLYL 495
Query: 368 IGTLVWNIFSTGEKILD 318
+GT++WN+FSTGEKI+D
Sbjct: 496 VGTVIWNLFSTGEKIID 512
>ref|NP_180526.1| putative Na+-dependent inorganic phosphate cotransporter; protein
id: At2g29650.1, supported by cDNA: gi_17064975
[Arabidopsis thaliana] gi|25296871|pir||H84698
hypothetical protein At2g29650 [imported] - Arabidopsis
thaliana gi|3582333|gb|AAC35230.1| putative
Na+-dependent inorganic phosphate cotransporter
[Arabidopsis thaliana]
Length = 512
Score = 134 bits (338), Expect = 6e-31
Identities = 61/77 (79%), Positives = 72/77 (93%)
Frame = -2
Query: 548 SQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRGSWNDVFKVAVVLYI 369
SQSGLYSNHQDI PRY+GVLLGLSNTAGVLAGV GTAATG+ILQ GSW+DVF ++V LY+
Sbjct: 436 SQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVLGTAATGHILQHGSWDDVFTISVGLYL 495
Query: 368 IGTLVWNIFSTGEKILD 318
+GT++WN+FSTGEKI+D
Sbjct: 496 VGTVIWNLFSTGEKIID 512
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 478,120,952
Number of Sequences: 1393205
Number of extensions: 10262991
Number of successful extensions: 33226
Number of sequences better than 10.0: 143
Number of HSP's better than 10.0 without gapping: 30988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33000
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 18947112822
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
