Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC018153A_C01 KMC018153A_c01
(632 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAD30862.1| putative phosphatase [Lycopersicon esculentum] g... 202 2e-63
emb|CAD30863.1| putative phosphatase [Lycopersicon esculentum] 201 3e-63
gb|AAG40473.1|AF305968_1 putative acid phosphatase [Lycopersicon... 203 3e-63
emb|CAD30864.1| putative phosphatase [Lycopersicon esculentum] 199 1e-62
dbj|BAB84416.1| P0690B02.4 [Oryza sativa (japonica cultivar-group)] 160 5e-50
>emb|CAD30862.1| putative phosphatase [Lycopersicon esculentum]
gi|26986124|emb|CAD30865.1| putative phosphatase
[Lycopersicon esculentum]
Length = 269
Score = 202 bits (514), Expect(2) = 2e-63
Identities = 96/136 (70%), Positives = 114/136 (83%)
Frame = +2
Query: 95 MAGIVVVFDFDSTIIECDSDNWLLDEFGLTEKFYQLLPTTPWGWNPLMDKMMNELHSQGK 274
MAGIVVVFDFD TII+ DSDNW++DE G T+ F QLLPT PW N LMD+MM ELH+QGK
Sbjct: 1 MAGIVVVFDFDKTIIDVDSDNWVVDELGATDLFNQLLPTMPW--NSLMDRMMKELHTQGK 58
Query: 275 TIEDIVEVLKRTPIHPCIVPAIKAAHSLGCELKIVSDANIFFIETILKHHGVRHCFSEIT 454
TI+DI EVLKR PIHP IVPAIK+AH+LGC+L+++SDAN+FFIETILKH G+R CFSEI
Sbjct: 59 TIQDIEEVLKRVPIHPRIVPAIKSAHALGCDLRVISDANVFFIETILKHLGIRDCFSEIN 118
Query: 455 ANPSFVNEEGRLQNWP 502
NP +V+ EGRL+ P
Sbjct: 119 TNPGYVDGEGRLRILP 134
Score = 62.8 bits (151), Expect(2) = 2e-63
Identities = 30/51 (58%), Positives = 37/51 (71%)
Frame = +3
Query: 480 KGGSRIGPYYDYLKSSHGCSLCPPNMCKGLVMDRIQNSLDAAGKKKFMIYL 632
+G RI PY D+ KS HGC+LCPPNMCKG++++RIQ A KK MIYL
Sbjct: 127 EGRLRILPYVDFQKSPHGCNLCPPNMCKGMIVERIQ----AKEGKKRMIYL 173
>emb|CAD30863.1| putative phosphatase [Lycopersicon esculentum]
Length = 269
Score = 201 bits (512), Expect(2) = 3e-63
Identities = 95/136 (69%), Positives = 114/136 (82%)
Frame = +2
Query: 95 MAGIVVVFDFDSTIIECDSDNWLLDEFGLTEKFYQLLPTTPWGWNPLMDKMMNELHSQGK 274
MAGIVVVFDFD TII+ DSDNW++DE G T+ F QLLPT PW N LMD+MM ELH+QGK
Sbjct: 1 MAGIVVVFDFDKTIIDVDSDNWVVDELGATDLFNQLLPTMPW--NSLMDRMMKELHTQGK 58
Query: 275 TIEDIVEVLKRTPIHPCIVPAIKAAHSLGCELKIVSDANIFFIETILKHHGVRHCFSEIT 454
TI+DI EVLKR PIHP IVPAIK+AH+LGC+L+++SDAN+FF+ETILKH G+R CFSEI
Sbjct: 59 TIQDIEEVLKRVPIHPRIVPAIKSAHALGCDLRVISDANVFFLETILKHLGIRDCFSEIN 118
Query: 455 ANPSFVNEEGRLQNWP 502
NP +V+ EGRL+ P
Sbjct: 119 TNPGYVDGEGRLRILP 134
Score = 62.8 bits (151), Expect(2) = 3e-63
Identities = 30/51 (58%), Positives = 37/51 (71%)
Frame = +3
Query: 480 KGGSRIGPYYDYLKSSHGCSLCPPNMCKGLVMDRIQNSLDAAGKKKFMIYL 632
+G RI PY D+ KS HGC+LCPPNMCKG++++RIQ A KK MIYL
Sbjct: 127 EGRLRILPYVDFQKSPHGCNLCPPNMCKGMIVERIQ----AKEGKKRMIYL 173
>gb|AAG40473.1|AF305968_1 putative acid phosphatase [Lycopersicon esculentum]
gi|26986116|emb|CAD30861.1| putative phosphatase
[Lycopersicon esculentum] gi|26986126|emb|CAD30866.1|
putative phosphatase [Lycopersicon esculentum]
Length = 269
Score = 203 bits (517), Expect(2) = 3e-63
Identities = 97/136 (71%), Positives = 114/136 (83%)
Frame = +2
Query: 95 MAGIVVVFDFDSTIIECDSDNWLLDEFGLTEKFYQLLPTTPWGWNPLMDKMMNELHSQGK 274
MAGIVVVFDFD TIIE DSDNW++DE G T+ F QLLPT PW N LMD+MM ELH+QGK
Sbjct: 1 MAGIVVVFDFDKTIIEVDSDNWVVDELGATDLFNQLLPTMPW--NSLMDRMMKELHTQGK 58
Query: 275 TIEDIVEVLKRTPIHPCIVPAIKAAHSLGCELKIVSDANIFFIETILKHHGVRHCFSEIT 454
TI+DI EVLKR PIHP IVPAIK+AH+LGC+L+++SDAN+FFIETILKH G+R CFSEI
Sbjct: 59 TIQDIEEVLKRVPIHPRIVPAIKSAHALGCDLRVISDANVFFIETILKHLGIRDCFSEIN 118
Query: 455 ANPSFVNEEGRLQNWP 502
NP +V+ EGRL+ P
Sbjct: 119 TNPGYVDGEGRLRILP 134
Score = 60.5 bits (145), Expect(2) = 3e-63
Identities = 29/51 (56%), Positives = 36/51 (69%)
Frame = +3
Query: 480 KGGSRIGPYYDYLKSSHGCSLCPPNMCKGLVMDRIQNSLDAAGKKKFMIYL 632
+G RI PY D+ KS H C+LCPPNMCKG++++RIQ A KK MIYL
Sbjct: 127 EGRLRILPYVDFQKSPHSCNLCPPNMCKGMIVERIQ----AKEGKKRMIYL 173
>emb|CAD30864.1| putative phosphatase [Lycopersicon esculentum]
Length = 269
Score = 199 bits (507), Expect(2) = 1e-62
Identities = 94/136 (69%), Positives = 114/136 (83%)
Frame = +2
Query: 95 MAGIVVVFDFDSTIIECDSDNWLLDEFGLTEKFYQLLPTTPWGWNPLMDKMMNELHSQGK 274
MAGIVVVFDFD TII+ DSDNW++DE G T+ F QLLPT PW N LM++MM ELH+QGK
Sbjct: 1 MAGIVVVFDFDKTIIDVDSDNWVVDELGATDLFNQLLPTMPW--NSLMNRMMKELHTQGK 58
Query: 275 TIEDIVEVLKRTPIHPCIVPAIKAAHSLGCELKIVSDANIFFIETILKHHGVRHCFSEIT 454
TI+DI EVLKR PIHP IVPAIK+AH+LGC+L+++SDAN+FF+ETILKH G+R CFSEI
Sbjct: 59 TIQDIEEVLKRVPIHPRIVPAIKSAHALGCDLRVISDANVFFLETILKHLGIRDCFSEIN 118
Query: 455 ANPSFVNEEGRLQNWP 502
NP +V+ EGRL+ P
Sbjct: 119 TNPGYVDGEGRLRILP 134
Score = 62.8 bits (151), Expect(2) = 1e-62
Identities = 30/51 (58%), Positives = 37/51 (71%)
Frame = +3
Query: 480 KGGSRIGPYYDYLKSSHGCSLCPPNMCKGLVMDRIQNSLDAAGKKKFMIYL 632
+G RI PY D+ KS HGC+LCPPNMCKG++++RIQ A KK MIYL
Sbjct: 127 EGRLRILPYVDFQKSPHGCNLCPPNMCKGMIVERIQ----AKEGKKRMIYL 173
>dbj|BAB84416.1| P0690B02.4 [Oryza sativa (japonica cultivar-group)]
Length = 274
Score = 160 bits (405), Expect(2) = 5e-50
Identities = 81/137 (59%), Positives = 101/137 (73%), Gaps = 1/137 (0%)
Frame = +2
Query: 95 MAGIVVVFDFDSTIIECDSDNWLLDEFGLTEKFYQLLPTTPWGWNPLMDKMMNELHSQGK 274
MAGIVVVFDFD TII+ DSDNW++D G TE+F +LLPT PW N LMD MM ELH+ GK
Sbjct: 1 MAGIVVVFDFDKTIIDVDSDNWVVDGLGATEEFERLLPTMPW--NTLMDTMMGELHASGK 58
Query: 275 TIEDIVEVLKRTPIHPCIVPAIKAAHSLGCELKIVSDANIFFIETILKHHGVRHCFSEIT 454
++ D+ VL+ P+ P +V AIKA + LGC+L+I+SDAN FFI+TIL HHG+ FSEI
Sbjct: 59 SLADVAGVLRSAPLDPRVVAAIKACYGLGCDLRILSDANRFFIDTILDHHGLTGYFSEIN 118
Query: 455 ANPSFVN-EEGRLQNWP 502
NPS V+ GRL+ P
Sbjct: 119 TNPSAVDAATGRLRIAP 135
Score = 59.7 bits (143), Expect(2) = 5e-50
Identities = 30/52 (57%), Positives = 36/52 (68%), Gaps = 2/52 (3%)
Frame = +3
Query: 483 GGSRIGPYYDYLKSSHGCSL--CPPNMCKGLVMDRIQNSLDAAGKKKFMIYL 632
G RI PY+D+ HGC L CPPNMCKG V+DRI+ S AAGK+ +IYL
Sbjct: 129 GRLRIAPYHDFHAGPHGCGLGICPPNMCKGQVLDRIRASAGAAGKR--VIYL 178
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 546,737,155
Number of Sequences: 1393205
Number of extensions: 11697479
Number of successful extensions: 28879
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 28181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28844
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 26154777244
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
