Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC017966A_C01 KMC017966A_c01
(531 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_198595.1| protein kinase - like protein; protein id: At5g... 58 3e-15
dbj|BAB10356.1| Ser/Thr protein kinase-like protein [Arabidopsis... 58 3e-15
ref|NP_176819.1| protein kinase, putative; protein id: At1g66460... 55 4e-13
dbj|BAB39873.1| putative protein kinase [Oryza sativa (japonica ... 37 0.19
dbj|BAB02005.1| protein kinase-like protein [Arabidopsis thaliana] 35 0.72
>ref|NP_198595.1| protein kinase - like protein; protein id: At5g37790.1, supported
by cDNA: 105458. [Arabidopsis thaliana]
gi|21536612|gb|AAM60944.1| protein kinase-like protein
[Arabidopsis thaliana]
Length = 552
Score = 58.2 bits (139), Expect(2) = 3e-15
Identities = 34/61 (55%), Positives = 43/61 (69%), Gaps = 2/61 (3%)
Frame = -2
Query: 530 QMGRMIEAAAACVTNEESRRPGIHEIIAILKGEE--EPIFCQRKKSRFLAHGCVIDCYSP 357
QM RMI AAAACV NEESRRPG+ EI++ILKGEE EP +K+ ++ +ID Y+
Sbjct: 464 QMERMIRAAAACVINEESRRPGMEEIVSILKGEEGVEPETHSSRKTTNISG--MIDSYTQ 521
Query: 356 L 354
L
Sbjct: 522 L 522
Score = 44.7 bits (104), Expect(2) = 3e-15
Identities = 20/28 (71%), Positives = 23/28 (81%)
Frame = -3
Query: 346 TNHEMKSHLALAMLGVSEFEDDDYLYDR 263
T EMK HL LAMLGV+EFEDDD++Y R
Sbjct: 525 TKSEMKCHLDLAMLGVTEFEDDDHVYGR 552
>dbj|BAB10356.1| Ser/Thr protein kinase-like protein [Arabidopsis thaliana]
Length = 304
Score = 58.2 bits (139), Expect(2) = 3e-15
Identities = 34/61 (55%), Positives = 43/61 (69%), Gaps = 2/61 (3%)
Frame = -2
Query: 530 QMGRMIEAAAACVTNEESRRPGIHEIIAILKGEE--EPIFCQRKKSRFLAHGCVIDCYSP 357
QM RMI AAAACV NEESRRPG+ EI++ILKGEE EP +K+ ++ +ID Y+
Sbjct: 216 QMERMIRAAAACVINEESRRPGMEEIVSILKGEEGVEPETHSSRKTTNISG--MIDSYTQ 273
Query: 356 L 354
L
Sbjct: 274 L 274
Score = 44.7 bits (104), Expect(2) = 3e-15
Identities = 20/28 (71%), Positives = 23/28 (81%)
Frame = -3
Query: 346 TNHEMKSHLALAMLGVSEFEDDDYLYDR 263
T EMK HL LAMLGV+EFEDDD++Y R
Sbjct: 277 TKSEMKCHLDLAMLGVTEFEDDDHVYGR 304
>ref|NP_176819.1| protein kinase, putative; protein id: At1g66460.1 [Arabidopsis
thaliana] gi|25404623|pir||B96690 probable protein
kinase F28G11.10 [imported] - Arabidopsis thaliana
gi|12322261|gb|AAG51156.1|AC074025_6 protein kinase,
putative [Arabidopsis thaliana]
Length = 467
Score = 55.5 bits (132), Expect(2) = 4e-13
Identities = 33/61 (54%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Frame = -2
Query: 527 MGRMIEAAAACVTNEESRRPGIHEIIAILKGEEE---PIFCQRKKSRFLAHGCVIDCYSP 357
M RMI AAAACV NEESRRPG+ EI++ILKG E RKKS ++DCY
Sbjct: 383 MERMIRAAAACVINEESRRPGMKEILSILKGGEGIELRTLSSRKKSNLPG---IMDCYPQ 439
Query: 356 L 354
L
Sbjct: 440 L 440
Score = 40.0 bits (92), Expect(2) = 4e-13
Identities = 19/25 (76%), Positives = 20/25 (80%)
Frame = -3
Query: 346 TNHEMKSHLALAMLGVSEFEDDDYL 272
T EMKSHL LAMLGV+EFE DD L
Sbjct: 443 TKSEMKSHLTLAMLGVTEFEADDLL 467
>dbj|BAB39873.1| putative protein kinase [Oryza sativa (japonica cultivar-group)]
Length = 698
Score = 36.6 bits (83), Expect = 0.19
Identities = 15/30 (50%), Positives = 23/30 (76%)
Frame = -2
Query: 530 QMGRMIEAAAACVTNEESRRPGIHEIIAIL 441
+M RMIEAAAAC+ + SRRP + +++ +L
Sbjct: 604 EMFRMIEAAAACIRHSASRRPRMSQVVRVL 633
>dbj|BAB02005.1| protein kinase-like protein [Arabidopsis thaliana]
Length = 567
Score = 34.7 bits (78), Expect = 0.72
Identities = 14/36 (38%), Positives = 22/36 (60%)
Frame = -2
Query: 530 QMGRMIEAAAACVTNEESRRPGIHEIIAILKGEEEP 423
+M RM+ AAACV RRP + +++ +L+G P
Sbjct: 515 EMARMVACAAACVRYTARRRPRMDQVVRVLEGNISP 550
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 449,494,113
Number of Sequences: 1393205
Number of extensions: 9393595
Number of successful extensions: 28627
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 28200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28624
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17596710992
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
