Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC017919A_C01 KMC017919A_c01
(575 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||VJCH2 vitellogenin II precursor [validated] - chicken gi|21... 40 0.016
gb|AAA98791.1| Gallus gallus vitellogenin 40 0.016
sp|P02845|VIT2_CHICK Vitellogenin II precursor (Major vitellogen... 40 0.016
ref|NP_701696.1| hypothetical protein [Plasmodium falciparum 3D7... 39 0.036
ref|NP_036842.1| seminal vesicle protein, secretion 2 [Rattus no... 39 0.047
>pir||VJCH2 vitellogenin II precursor [validated] - chicken
gi|212881|gb|AAA49139.1| vitellogenin
Length = 1852
Score = 40.4 bits (93), Expect = 0.016
Identities = 41/176 (23%), Positives = 73/176 (41%), Gaps = 2/176 (1%)
Frame = +2
Query: 8 KSDKPHEYHSRGSQHRNRSHATN*KGRSLETGLHANRSMQKHGASQQKQPKHNSYTLTYS 187
K E + + Q RN+ +++ RS ++ + RS K S ++ +S + + S
Sbjct: 1149 KKPMDEEENDQVKQARNKDASSS--SRSSKSSNSSKRSSSKSSNSSKRSSSSSSSSSSSS 1206
Query: 188 RPNTTKRSTPRNAKASEQMEASSSAMSTSLGMMKPGNVPTACTDRDSLFEGQEKSLAQST 367
R +++ S+ N+K+S SSS+ S S K + ++ + S +S + S+
Sbjct: 1207 RSSSSSSSSSSNSKSSSSSSKSSSSSSRSRSSSKSSSSSSSSSSSSSSKSSSSRSSSSSS 1266
Query: 368 FSSKEILFQEKS--LSQSFSLKGFSSKKSDHFLETFSQSFYIWQKLTFRSKIASKL 529
SS S L+ S S S S H E S + S + SK+
Sbjct: 1267 KSSSHHSHSHHSGHLNGSSSSSSSSRSVSHHSHEHHSGHLEDDSSSSSSSSVLSKI 1322
>gb|AAA98791.1| Gallus gallus vitellogenin
Length = 247
Score = 40.4 bits (93), Expect = 0.016
Identities = 41/176 (23%), Positives = 73/176 (41%), Gaps = 2/176 (1%)
Frame = +2
Query: 8 KSDKPHEYHSRGSQHRNRSHATN*KGRSLETGLHANRSMQKHGASQQKQPKHNSYTLTYS 187
K E + + Q RN+ +++ RS ++ + RS K S ++ +S + + S
Sbjct: 56 KKPMDEEENDQVKQARNKDASSS--SRSSKSSNSSKRSSSKSSNSSKRSSSSSSSSSSSS 113
Query: 188 RPNTTKRSTPRNAKASEQMEASSSAMSTSLGMMKPGNVPTACTDRDSLFEGQEKSLAQST 367
R +++ S+ N+K+S SSS+ S S K + ++ + S +S + S+
Sbjct: 114 RSSSSSSSSSSNSKSSSSSSKSSSSSSRSRSSSKSSSSSSSSSSSSSSKSSSSRSSSSSS 173
Query: 368 FSSKEILFQEKS--LSQSFSLKGFSSKKSDHFLETFSQSFYIWQKLTFRSKIASKL 529
SS S L+ S S S S H E S + S + SK+
Sbjct: 174 KSSSHHSHSHHSGHLNGSSSSSSSSRSVSHHSHEHHSGHLEDDSSSSSSSSVLSKI 229
>sp|P02845|VIT2_CHICK Vitellogenin II precursor (Major vitellogenin) [Contains:
Lipovitellin I (LVI); Phosvitin (PV); Lipovitellin II
(LVII); YGP40] gi|63887|emb|CAA31942.1| vitellogenin
[Gallus gallus]
Length = 1850
Score = 40.4 bits (93), Expect = 0.016
Identities = 41/176 (23%), Positives = 73/176 (41%), Gaps = 2/176 (1%)
Frame = +2
Query: 8 KSDKPHEYHSRGSQHRNRSHATN*KGRSLETGLHANRSMQKHGASQQKQPKHNSYTLTYS 187
K E + + Q RN+ +++ RS ++ + RS K S ++ +S + + S
Sbjct: 1147 KKPMDEEENDQVKQARNKDASSS--SRSSKSSNSSKRSSSKSSNSSKRSSSSSSSSSSSS 1204
Query: 188 RPNTTKRSTPRNAKASEQMEASSSAMSTSLGMMKPGNVPTACTDRDSLFEGQEKSLAQST 367
R +++ S+ N+K+S SSS+ S S K + ++ + S +S + S+
Sbjct: 1205 RSSSSSSSSSSNSKSSSSSSKSSSSSSRSRSSSKSSSSSSSSSSSSSSKSSSSRSSSSSS 1264
Query: 368 FSSKEILFQEKS--LSQSFSLKGFSSKKSDHFLETFSQSFYIWQKLTFRSKIASKL 529
SS S L+ S S S S H E S + S + SK+
Sbjct: 1265 KSSSHHSHSHHSGHLNGSSSSSSSSRSVSHHSHEHHSGHLEDDSSSSSSSSVLSKI 1320
>ref|NP_701696.1| hypothetical protein [Plasmodium falciparum 3D7]
gi|23496867|gb|AAN36420.1|AE014849_39 hypothetical
protein [Plasmodium falciparum 3D7]
Length = 1130
Score = 39.3 bits (90), Expect = 0.036
Identities = 38/185 (20%), Positives = 81/185 (43%), Gaps = 12/185 (6%)
Frame = +2
Query: 11 SDKPHEYHSRGSQHRNRSHATN*KG--RSLETGLHANRSMQKHGASQQ---KQPKHNSYT 175
+DK +++ + SQH ++S N K + ++ H ++S Q + S Q K +HN +
Sbjct: 246 NDKSSQHNDKSSQHNDKSSQHNDKSSQHNDKSSQHNDKSSQHNDKSSQHNDKSSQHNDIS 305
Query: 176 LTYSRPNT--TKRSTPRNAKASEQMEASSSAMSTSLG-MMKPGNVPTACTDRDSLFEGQE 346
++ ++ +S+ N K+S+ + SS S +K N D++S E
Sbjct: 306 SEHNDKSSDHNDKSSDHNDKSSDHNDKSSEQKEVSPNPHIKNFNKDIKINDKESENISSE 365
Query: 347 KSLAQSTFSSKEILFQEKSLSQSFSLKGFSSKKSDHFLET----FSQSFYIWQKLTFRSK 514
+ + + +L+++ L+ + K S++K F E ++W + +
Sbjct: 366 EPKENVLLNRESVLYKD-VLNYNLKEKSVSNRKVRRFFENKMNIKENGIFVWNENIYNLL 424
Query: 515 IASKL 529
+ S L
Sbjct: 425 VDSNL 429
>ref|NP_036842.1| seminal vesicle protein, secretion 2 [Rattus norvegicus]
gi|135070|sp|P22006|SVS2_RAT Seminal vesicle secretory
protein II precursor (SVS II) gi|112291|pir||A36443
seminal vesicle secretory protein II precursor - rat
gi|207115|gb|AAA42192.1| seminal vesicle secretion II
protein (SVS II) precursor
Length = 414
Score = 38.9 bits (89), Expect = 0.047
Identities = 31/84 (36%), Positives = 43/84 (50%), Gaps = 5/84 (5%)
Frame = +2
Query: 206 RSTPRNAKASEQMEASSSAMSTSLGMMKPGNVPTACT--DRDSLFE--GQEKSLAQSTFS 373
+S AK+ Q+++ S M +S G K T D+D+ + GQ+KS QS+FS
Sbjct: 234 KSLESQAKSFGQVKSQSGQMKSSYGQRKSYGEETQLKSFDQDAQLKSYGQQKSQKQSSFS 293
Query: 374 S-KEILFQEKSLSQSFSLKGFSSK 442
K Q KS Q SLKGFS +
Sbjct: 294 QVKSQSAQLKSFGQQKSLKGFSQQ 317
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 516,352,148
Number of Sequences: 1393205
Number of extensions: 11303972
Number of successful extensions: 44784
Number of sequences better than 10.0: 93
Number of HSP's better than 10.0 without gapping: 39610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43897
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 21530810025
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
