Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC017851A_C01 KMC017851A_c01
(595 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T09653 delta-1-pyrroline-5-carboxylate synthase 2, salt str... 140 1e-32
dbj|BAB33037.1| VuP5CS [Vigna unguiculata] 139 2e-32
emb|CAC82186.1| pyrroline-5-carboxylate synthetase 2 [Medicago t... 135 3e-31
gb|AAM28630.1|AF503911_1 delta 1-pyrroline-5-carboxylate synthet... 135 5e-31
sp|O65361|P5CS_MESCR Delta 1-pyrroline-5-carboxylate synthetase ... 127 1e-28
>pir||T09653 delta-1-pyrroline-5-carboxylate synthase 2, salt stress-induced -
alfalfa (fragment) gi|1781040|emb|CAA67070.1|
delta-1-pyrroline-5-carboxylate synthase [Medicago
sativa]
Length = 281
Score = 140 bits (353), Expect = 1e-32
Identities = 66/73 (90%), Positives = 70/73 (95%)
Frame = -2
Query: 594 SAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTNRWILRGSGHVVDGDR 415
SAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTNRW+LRG+G VVDGDR
Sbjct: 209 SAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTNRWVLRGNGQVVDGDR 268
Query: 414 EVKYTHKELPLKA 376
+ YTHKELP+KA
Sbjct: 269 SMIYTHKELPIKA 281
>dbj|BAB33037.1| VuP5CS [Vigna unguiculata]
Length = 751
Score = 139 bits (351), Expect = 2e-32
Identities = 66/73 (90%), Positives = 71/73 (96%)
Frame = -2
Query: 594 SAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTNRWILRGSGHVVDGDR 415
SAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTNRWILRGSGHVV+GD+
Sbjct: 679 SAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTNRWILRGSGHVVNGDQ 738
Query: 414 EVKYTHKELPLKA 376
+ YT+KELPL+A
Sbjct: 739 GINYTYKELPLEA 751
>emb|CAC82186.1| pyrroline-5-carboxylate synthetase 2 [Medicago truncatula]
Length = 257
Score = 135 bits (341), Expect = 3e-31
Identities = 64/73 (87%), Positives = 69/73 (93%)
Frame = -2
Query: 594 SAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTNRWILRGSGHVVDGDR 415
SAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTNRW+LRG+G VVDGDR
Sbjct: 185 SAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTNRWVLRGNGQVVDGDR 244
Query: 414 EVKYTHKELPLKA 376
+ YTHK+L +KA
Sbjct: 245 SMIYTHKDLQVKA 257
>gb|AAM28630.1|AF503911_1 delta 1-pyrroline-5-carboxylate synthetase [Suaeda maritima subsp.
salsa]
Length = 226
Score = 135 bits (339), Expect = 5e-31
Identities = 64/73 (87%), Positives = 68/73 (92%)
Frame = -2
Query: 594 SAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTNRWILRGSGHVVDGDR 415
SAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLT RWIL+GSG +VDGD+
Sbjct: 154 SAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILKGSGQIVDGDK 213
Query: 414 EVKYTHKELPLKA 376
V YTHKELP+ A
Sbjct: 214 GVVYTHKELPIVA 226
>sp|O65361|P5CS_MESCR Delta 1-pyrroline-5-carboxylate synthetase (P5CS) [Includes:
Glutamate 5-kinase (Gamma-glutamyl kinase) (GK);
Gamma-glutamyl phosphate reductase (GPR)
(Glutamate-5-semialdehyde dehydrogenase)
(Glutamyl-gamma-semialdehyde dehydrogenase)]
gi|7484636|pir||T12258 pyrroline-5-carboxylate
synthetase (EC 1.5.1.-) - common ice plant
gi|3176965|gb|AAC18862.1| pyrroline-5-carboxylate
synthetase [Mesembryanthemum crystallinum]
Length = 719
Score = 127 bits (319), Expect = 1e-28
Identities = 61/73 (83%), Positives = 65/73 (88%)
Frame = -2
Query: 594 SAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTNRWILRGSGHVVDGDR 415
SAAV HNASTRFCDG RFGLGAEVGISTSRIHARGPVGVEGLLT RW+L+GSG VV GD+
Sbjct: 644 SAAVLHNASTRFCDGFRFGLGAEVGISTSRIHARGPVGVEGLLTTRWVLKGSGQVVHGDK 703
Query: 414 EVKYTHKELPLKA 376
V YTHK+LPL A
Sbjct: 704 GVVYTHKDLPLVA 716
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 504,048,770
Number of Sequences: 1393205
Number of extensions: 10816818
Number of successful extensions: 30349
Number of sequences better than 10.0: 171
Number of HSP's better than 10.0 without gapping: 28846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30293
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22854740960
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
