Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC017686A_C01 KMC017686A_c01
(609 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_564285.1| calmodulin-binding protein; protein id: At1g274... 83 3e-15
dbj|BAC41834.1| putative disease resistance protein [Arabidopsis... 36 0.45
ref|NP_199339.1| disease resistance protein (TIR-NBS-LRR class),... 34 1.7
gb|EAA28963.1| hypothetical protein [Neurospora crassa] 32 6.5
ref|XP_145341.1| similar to vomeronasal 2, receptor, 4; vomerona... 32 8.5
>ref|NP_564285.1| calmodulin-binding protein; protein id: At1g27460.1, supported by
cDNA: gi_16226497 [Arabidopsis thaliana]
gi|9802536|gb|AAF99738.1|AC004557_17 F17L21.25
[Arabidopsis thaliana]
gi|16226498|gb|AAL16183.1|AF428415_1 At1g27460/F17L21_26
[Arabidopsis thaliana]
Length = 694
Score = 82.8 bits (203), Expect = 3e-15
Identities = 41/58 (70%), Positives = 47/58 (80%)
Frame = +2
Query: 434 MLCACSGEQFKFEEAPQSPESLATRDFSASGLSSNSRTVDCESKFSECQVKDAESTLK 607
MLCACSGEQF+FE+ P SPESLATRDFSASGLSS + D +SK + QV +AESTLK
Sbjct: 1 MLCACSGEQFRFEDQPGSPESLATRDFSASGLSSRNGGGDWDSKLEDIQVDEAESTLK 58
>dbj|BAC41834.1| putative disease resistance protein [Arabidopsis thaliana]
Length = 1187
Score = 35.8 bits (81), Expect = 0.45
Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 4/96 (4%)
Frame = +3
Query: 255 FSYFNCIDQYTSCKLVILL----NFNRTVSLDTLIQK*FQLATLSKGKIHTNFWFHSLSS 422
FS C Q + VI L F V +D L+ K L T+S+ ++ W H L+
Sbjct: 394 FSDIACFFQGENVNYVIQLLEGCGFFPHVEIDVLVDK--CLVTISENRV----WLHKLTQ 447
Query: 423 DFGRCCVLAPGSNSNLKRRRSHRNPWQQGISLLVDY 530
D GR + G ++RRR PW I L++Y
Sbjct: 448 DIGR--EIINGETVQIERRRRLWEPW--SIKYLLEY 479
>ref|NP_199339.1| disease resistance protein (TIR-NBS-LRR class), putative; protein
id: At5g45260.1 [Arabidopsis thaliana]
gi|10176997|dbj|BAB10247.1| disease resistance
protein-like [Arabidopsis thaliana]
Length = 1187
Score = 33.9 bits (76), Expect = 1.7
Identities = 22/68 (32%), Positives = 34/68 (49%)
Frame = +3
Query: 327 VSLDTLIQK*FQLATLSKGKIHTNFWFHSLSSDFGRCCVLAPGSNSNLKRRRSHRNPWQQ 506
V +D L+ K L T+S+ ++ W H L+ D GR + G ++RRR PW
Sbjct: 422 VEIDVLVDK--CLVTISENRV----WLHKLTQDIGR--EIINGETVQIERRRRLWEPW-- 471
Query: 507 GISLLVDY 530
I L++Y
Sbjct: 472 SIKYLLEY 479
>gb|EAA28963.1| hypothetical protein [Neurospora crassa]
Length = 459
Score = 32.0 bits (71), Expect = 6.5
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +2
Query: 437 LCACSGEQFKFEEAPQSPESLATRDFSASGLSSNSRTVDCESKFSECQVKDAE 595
L GE + E Q +S TR+F +S RT++ ++ S+C+V +AE
Sbjct: 381 LTLTDGESWVKSELCQGQKSDKTRNFYIKATTSKGRTLEAGTRTSDCKVFEAE 433
>ref|XP_145341.1| similar to vomeronasal 2, receptor, 4; vomeronasal organ family 2,
receptor, 4 [Mus musculus]
Length = 808
Score = 31.6 bits (70), Expect = 8.5
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +3
Query: 255 FSYFNCIDQYTSCKLVILLNFNRTVSLDTLIQK*FQL 365
+ YFNC D +CK IL+N++ SLD L+ + F++
Sbjct: 311 WKYFNCEDSACNCK--ILMNYSANSSLDWLMGQKFEI 345
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 480,619,884
Number of Sequences: 1393205
Number of extensions: 9695612
Number of successful extensions: 23552
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 23085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23542
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 24283162270
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
