Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC017282A_C01 KMC017282A_c01
(591 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P51074|ANX4_FRAAN Annexin-like protein RJ4 gi|6010777|gb|AAF0... 200 1e-50
pir||S56674 annexin homolog RJ4 (clone RJ4) - garden strawberry ... 200 1e-50
emb|CAA75308.1| annexin [Medicago truncatula] gi|22859608|emb|CA... 194 7e-49
emb|CAC42899.1| annexin-like protein [Arabidopsis thaliana] 152 2e-36
ref|NP_568271.2| annexin-like protein; protein id: At5g12380.1 [... 152 2e-36
>sp|P51074|ANX4_FRAAN Annexin-like protein RJ4 gi|6010777|gb|AAF01250.1| annexin
[Fragaria x ananassa]
Length = 314
Score = 200 bits (509), Expect = 1e-50
Identities = 96/130 (73%), Positives = 117/130 (89%)
Frame = -2
Query: 590 NEEAIRILTTRSKTQLVATFNRYRDDHGISITKKLLDNASDDFHKALHTAIRCINDHQKY 411
+EE IRIL+TRSKTQL+ATFN+YRDD GISI+K LL+ ++DF KALHTAIRC+ND +KY
Sbjct: 185 HEEIIRILSTRSKTQLMATFNKYRDDQGISISKNLLEEGANDFQKALHTAIRCLNDPKKY 244
Query: 410 YEKVLRNALKRVGSDEDGLTRVVVTRAEKDLKEIKELYYKRNSVHLEDAVAKELSGDYKK 231
+EKVLRNA+KRVG+DED LTRV+VTRAE+DL++IKE+YYK+NSV LE AVAK+ SGDYK
Sbjct: 245 FEKVLRNAIKRVGTDEDALTRVIVTRAERDLRDIKEVYYKKNSVPLEQAVAKDTSGDYKA 304
Query: 230 FILTLLGKPD 201
F+LTLLGK D
Sbjct: 305 FLLTLLGKED 314
>pir||S56674 annexin homolog RJ4 (clone RJ4) - garden strawberry (fragment)
gi|643076|gb|AAA79922.1| annexin
Length = 271
Score = 200 bits (509), Expect = 1e-50
Identities = 96/130 (73%), Positives = 117/130 (89%)
Frame = -2
Query: 590 NEEAIRILTTRSKTQLVATFNRYRDDHGISITKKLLDNASDDFHKALHTAIRCINDHQKY 411
+EE IRIL+TRSKTQL+ATFN+YRDD GISI+K LL+ ++DF KALHTAIRC+ND +KY
Sbjct: 142 HEEIIRILSTRSKTQLMATFNKYRDDQGISISKNLLEEGANDFQKALHTAIRCLNDPKKY 201
Query: 410 YEKVLRNALKRVGSDEDGLTRVVVTRAEKDLKEIKELYYKRNSVHLEDAVAKELSGDYKK 231
+EKVLRNA+KRVG+DED LTRV+VTRAE+DL++IKE+YYK+NSV LE AVAK+ SGDYK
Sbjct: 202 FEKVLRNAIKRVGTDEDALTRVIVTRAERDLRDIKEVYYKKNSVPLEQAVAKDTSGDYKA 261
Query: 230 FILTLLGKPD 201
F+LTLLGK D
Sbjct: 262 FLLTLLGKED 271
>emb|CAA75308.1| annexin [Medicago truncatula] gi|22859608|emb|CAD29698.1| annexin
[Medicago truncatula]
Length = 313
Score = 194 bits (493), Expect = 7e-49
Identities = 95/130 (73%), Positives = 112/130 (86%)
Frame = -2
Query: 590 NEEAIRILTTRSKTQLVATFNRYRDDHGISITKKLLDNASDDFHKALHTAIRCINDHQKY 411
+EEAIRILTTRSKTQL+ATFNRYR+ HG SITKKLLD SD+F KAL+T IR NDH KY
Sbjct: 184 HEEAIRILTTRSKTQLIATFNRYRETHGTSITKKLLDEGSDEFQKALYTTIRSFNDHVKY 243
Query: 410 YEKVLRNALKRVGSDEDGLTRVVVTRAEKDLKEIKELYYKRNSVHLEDAVAKELSGDYKK 231
YEKV+R+A+K+VG+DED LTRV+V+RA+ DLK I ++YYKRNSV LE VAKE SGDYKK
Sbjct: 244 YEKVVRDAIKKVGTDEDALTRVIVSRAQHDLKVISDVYYKRNSVLLEHVVAKETSGDYKK 303
Query: 230 FILTLLGKPD 201
F+LTLLGK +
Sbjct: 304 FLLTLLGKEE 313
>emb|CAC42899.1| annexin-like protein [Arabidopsis thaliana]
Length = 257
Score = 152 bits (385), Expect = 2e-36
Identities = 75/127 (59%), Positives = 97/127 (76%)
Frame = -2
Query: 590 NEEAIRILTTRSKTQLVATFNRYRDDHGISITKKLLDNASDDFHKALHTAIRCINDHQKY 411
+EE IR+L+TRS QL A FNRY+D +G SITK LL++ ++++ AL AIRCI + +Y
Sbjct: 126 HEETIRVLSTRSSMQLSAIFNRYKDIYGTSITKDLLNHPTNEYLSALRAAIRCIKNPTRY 185
Query: 410 YEKVLRNALKRVGSDEDGLTRVVVTRAEKDLKEIKELYYKRNSVHLEDAVAKELSGDYKK 231
Y KVLRN++ VG+DED L RV+VTRAEKDL I LY+KRN+V L+ A+AKE SGDYK
Sbjct: 186 YAKVLRNSINTVGTDEDALNRVIVTRAEKDLTNITGLYFKRNNVSLDQAIAKETSGDYKA 245
Query: 230 FILTLLG 210
F+L LLG
Sbjct: 246 FLLALLG 252
>ref|NP_568271.2| annexin-like protein; protein id: At5g12380.1 [Arabidopsis
thaliana]
Length = 316
Score = 152 bits (385), Expect = 2e-36
Identities = 75/127 (59%), Positives = 97/127 (76%)
Frame = -2
Query: 590 NEEAIRILTTRSKTQLVATFNRYRDDHGISITKKLLDNASDDFHKALHTAIRCINDHQKY 411
+EE IR+L+TRS QL A FNRY+D +G SITK LL++ ++++ AL AIRCI + +Y
Sbjct: 185 HEETIRVLSTRSSMQLSAIFNRYKDIYGTSITKDLLNHPTNEYLSALRAAIRCIKNPTRY 244
Query: 410 YEKVLRNALKRVGSDEDGLTRVVVTRAEKDLKEIKELYYKRNSVHLEDAVAKELSGDYKK 231
Y KVLRN++ VG+DED L RV+VTRAEKDL I LY+KRN+V L+ A+AKE SGDYK
Sbjct: 245 YAKVLRNSINTVGTDEDALNRVIVTRAEKDLTNITGLYFKRNNVSLDQAIAKETSGDYKA 304
Query: 230 FILTLLG 210
F+L LLG
Sbjct: 305 FLLALLG 311
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 507,246,879
Number of Sequences: 1393205
Number of extensions: 11177192
Number of successful extensions: 32917
Number of sequences better than 10.0: 295
Number of HSP's better than 10.0 without gapping: 31300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32828
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22569056698
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
