Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC017266A_C01 KMC017266A_c01
(874 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB54520.1| MAP3K epsilon 1 protein kinase [Brassica napus] 203 1e-58
ref|NP_187962.1| MAP3K epsilon protein kinase; protein id: At3g1... 202 3e-58
emb|CAA12272.1| MAP3K epsilon protein kinase [Arabidopsis thaliana] 202 3e-58
ref|NP_187455.1| putative MAP3K epsilon protein kinase; protein ... 197 3e-56
gb|AAF15541.1| septation [Aspergillus nidulans] 132 7e-30
>emb|CAB54520.1| MAP3K epsilon 1 protein kinase [Brassica napus]
Length = 1299
Score = 203 bits (517), Expect(2) = 1e-58
Identities = 96/108 (88%), Positives = 100/108 (91%)
Frame = -3
Query: 803 WMAPEVIEMSGVCAASDIGSVACTFIELLTCVPPYYDLQPMPALFRIVQDEQPPIPDSLS 624
WMAPEVIEMSGVCAASDI SV CT IELLTCVPPYYDLQPMPALFRIVQD+ PPIPDSLS
Sbjct: 185 WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVQDDSPPIPDSLS 244
Query: 623 PNITDFLHQCFKKDARQRPDAKTLLSHPWILNCRRVLQSSLRHSGTLR 480
P+ITDFL QCFKKD+RQRPDAKTLLSHPWI N RR LQSSLRHSGT+R
Sbjct: 245 PDITDFLRQCFKKDSRQRPDAKTLLSHPWIRNSRRALQSSLRHSGTIR 292
Score = 45.8 bits (107), Expect(2) = 1e-58
Identities = 20/22 (90%), Positives = 21/22 (94%)
Frame = -2
Query: 873 DFGVATKLTEADINTHSVVGTP 808
DFGVATKL EAD+NTHSVVGTP
Sbjct: 162 DFGVATKLNEADVNTHSVVGTP 183
>ref|NP_187962.1| MAP3K epsilon protein kinase; protein id: At3g13530.1 [Arabidopsis
thaliana] gi|9280305|dbj|BAB01760.1| MAP3K epsilon
protein kinase [Arabidopsis thaliana]
Length = 1368
Score = 202 bits (514), Expect(2) = 3e-58
Identities = 95/108 (87%), Positives = 100/108 (91%)
Frame = -3
Query: 803 WMAPEVIEMSGVCAASDIGSVACTFIELLTCVPPYYDLQPMPALFRIVQDEQPPIPDSLS 624
WMAPEVIEMSGVCAASDI SV CT IELLTCVPPYYDLQPMPALFRIVQD+ PPIPDSLS
Sbjct: 185 WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVQDDNPPIPDSLS 244
Query: 623 PNITDFLHQCFKKDARQRPDAKTLLSHPWILNCRRVLQSSLRHSGTLR 480
P+ITDFL QCFKKD+RQRPDAKTLLSHPWI N RR LQSSLRHSGT++
Sbjct: 245 PDITDFLRQCFKKDSRQRPDAKTLLSHPWIRNSRRALQSSLRHSGTIK 292
Score = 45.8 bits (107), Expect(2) = 3e-58
Identities = 20/22 (90%), Positives = 21/22 (94%)
Frame = -2
Query: 873 DFGVATKLTEADINTHSVVGTP 808
DFGVATKL EAD+NTHSVVGTP
Sbjct: 162 DFGVATKLNEADVNTHSVVGTP 183
>emb|CAA12272.1| MAP3K epsilon protein kinase [Arabidopsis thaliana]
Length = 1368
Score = 202 bits (514), Expect(2) = 3e-58
Identities = 95/108 (87%), Positives = 100/108 (91%)
Frame = -3
Query: 803 WMAPEVIEMSGVCAASDIGSVACTFIELLTCVPPYYDLQPMPALFRIVQDEQPPIPDSLS 624
WMAPEVIEMSGVCAASDI SV CT IELLTCVPPYYDLQPMPALFRIVQD+ PPIPDSLS
Sbjct: 185 WMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVQDDNPPIPDSLS 244
Query: 623 PNITDFLHQCFKKDARQRPDAKTLLSHPWILNCRRVLQSSLRHSGTLR 480
P+ITDFL QCFKKD+RQRPDAKTLLSHPWI N RR LQSSLRHSGT++
Sbjct: 245 PDITDFLRQCFKKDSRQRPDAKTLLSHPWIRNSRRALQSSLRHSGTIK 292
Score = 45.8 bits (107), Expect(2) = 3e-58
Identities = 20/22 (90%), Positives = 21/22 (94%)
Frame = -2
Query: 873 DFGVATKLTEADINTHSVVGTP 808
DFGVATKL EAD+NTHSVVGTP
Sbjct: 162 DFGVATKLNEADVNTHSVVGTP 183
>ref|NP_187455.1| putative MAP3K epsilon protein kinase; protein id: At3g07980.1
[Arabidopsis thaliana]
gi|6648210|gb|AAF21208.1|AC013483_32 putative MAP3K
epsilon protein kinase [Arabidopsis thaliana]
Length = 1367
Score = 197 bits (500), Expect(2) = 3e-56
Identities = 92/108 (85%), Positives = 99/108 (91%)
Frame = -3
Query: 803 WMAPEVIEMSGVCAASDIGSVACTFIELLTCVPPYYDLQPMPALFRIVQDEQPPIPDSLS 624
WMAPEVIE+SGVCAASDI SV CT IELLTCVPPYYDLQPMPAL+RIVQD+ PPIPDSLS
Sbjct: 185 WMAPEVIELSGVCAASDIWSVGCTIIELLTCVPPYYDLQPMPALYRIVQDDTPPIPDSLS 244
Query: 623 PNITDFLHQCFKKDARQRPDAKTLLSHPWILNCRRVLQSSLRHSGTLR 480
P+ITDFL CFKKD+RQRPDAKTLLSHPWI N RR L+SSLRHSGT+R
Sbjct: 245 PDITDFLRLCFKKDSRQRPDAKTLLSHPWIRNSRRALRSSLRHSGTIR 292
Score = 44.7 bits (104), Expect(2) = 3e-56
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = -2
Query: 873 DFGVATKLTEADINTHSVVGTP 808
DFGVATKL EAD NTHSVVGTP
Sbjct: 162 DFGVATKLNEADFNTHSVVGTP 183
>gb|AAF15541.1| septation [Aspergillus nidulans]
Length = 1320
Score = 132 bits (332), Expect = 7e-30
Identities = 61/95 (64%), Positives = 70/95 (73%)
Frame = -3
Query: 803 WMAPEVIEMSGVCAASDIGSVACTFIELLTCVPPYYDLQPMPALFRIVQDEQPPIPDSLS 624
WMAPEVIE+SG ASDI S+ CT IELL PPYY+LQPMPALFRIV D+ PP+P S
Sbjct: 176 WMAPEVIELSGATTASDIWSLGCTVIELLEGKPPYYNLQPMPALFRIVNDDHPPLPQGAS 235
Query: 623 PNITDFLHQCFKKDARQRPDAKTLLSHPWILNCRR 519
P + DFL QCF+KD R A+ LL HPWI+N RR
Sbjct: 236 PAVKDFLMQCFQKDPNLRVSARKLLKHPWIVNARR 270
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 718,327,418
Number of Sequences: 1393205
Number of extensions: 15233918
Number of successful extensions: 44963
Number of sequences better than 10.0: 2534
Number of HSP's better than 10.0 without gapping: 41636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43738
length of database: 448,689,247
effective HSP length: 122
effective length of database: 278,718,237
effective search space used: 46824663816
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
