Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC017265A_C01 KMC017265A_c01
(587 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_188087.1| cytochrome P450, putative; protein id: At3g1469... 201 4e-51
ref|NP_188086.1| cytochrome P450, putative; protein id: At3g1468... 196 1e-49
dbj|BAB02396.1| cytochrome P450 [Arabidopsis thaliana] 191 6e-48
ref|NP_188082.1| cytochrome P450, putative; protein id: At3g1464... 191 6e-48
ref|NP_188084.1| cytochrome P450, putative; protein id: At3g1466... 188 5e-47
>ref|NP_188087.1| cytochrome P450, putative; protein id: At3g14690.1, supported by
cDNA: gi_15292786, supported by cDNA: gi_20465786
[Arabidopsis thaliana] gi|9294391|dbj|BAB02401.1|
cytochrome P450 [Arabidopsis thaliana]
gi|15292787|gb|AAK92762.1| putative cytochrome P450
protein [Arabidopsis thaliana]
gi|20465787|gb|AAM20382.1| putative cytochrome P450
protein [Arabidopsis thaliana]
Length = 512
Score = 201 bits (512), Expect = 4e-51
Identities = 88/177 (49%), Positives = 124/177 (69%)
Frame = +3
Query: 57 ITTIGVISSVIATVVIWWIWSALNWVWLRPKRIERAMKQQGLQGNSYRPLVGDIRDMVKM 236
I+ V SV+ VV WWIW L WVW +PK +E +++QGL G Y PLVGD++ M
Sbjct: 3 ISVASVTISVVLAVVSWWIWRTLQWVWFKPKMLEHYLRRQGLAGTPYTPLVGDLKKNFTM 62
Query: 237 IKEAKSKPMDPYSNDIAPRVLPFVVHTIAKYGKNSFMWLGPRPRLFIMDPDKIKEIANKV 416
+ EA+SKP+ ++DI+PRV+P+ + YG+ F W GP P + IMDP++IKE+ NKV
Sbjct: 63 LSEARSKPLK-LTDDISPRVVPYPLQMFKTYGRTYFTWFGPIPTITIMDPEQIKEVFNKV 121
Query: 417 YEFQKPDTSPLFKLLASGFANYDGDKWAKHRKIVSPAFNVEKLKLLGPIFCECCDDM 587
Y+FQKP T PL ++A G ANYDGDKWAKHR+I++PAF++EK+K + P F + C ++
Sbjct: 122 YDFQKPHTFPLATIIAKGLANYDGDKWAKHRRIINPAFHIEKIKNMVPAFHQSCREV 178
>ref|NP_188086.1| cytochrome P450, putative; protein id: At3g14680.1, supported by
cDNA: gi_13605896 [Arabidopsis thaliana]
gi|9294390|dbj|BAB02400.1| cytochrome P450 [Arabidopsis
thaliana] gi|13605897|gb|AAK32934.1|AF367347_1
AT3g14680/MIE1_18 [Arabidopsis thaliana]
gi|24111277|gb|AAN46762.1| At3g14680/MIE1_18
[Arabidopsis thaliana]
Length = 512
Score = 196 bits (499), Expect = 1e-49
Identities = 88/184 (47%), Positives = 127/184 (68%)
Frame = +3
Query: 36 MGISSSSITTIGVISSVIATVVIWWIWSALNWVWLRPKRIERAMKQQGLQGNSYRPLVGD 215
M IS SS+T S+ VV WW+W L WVW PK +ER++++QGL G SY PL+GD
Sbjct: 1 MEISVSSVTF-----SLAVVVVSWWVWRTLKWVWFTPKMLERSLRRQGLSGTSYTPLIGD 55
Query: 216 IRDMVKMIKEAKSKPMDPYSNDIAPRVLPFVVHTIAKYGKNSFMWLGPRPRLFIMDPDKI 395
+ M+ M EA SKP+ P ++DI PRV+P + + +G+ + W GP P + IMDP++I
Sbjct: 56 FKKMISMFIEATSKPIKP-TDDITPRVMPHPLQMLKTHGRTNLTWFGPIPTITIMDPEQI 114
Query: 396 KEIANKVYEFQKPDTSPLFKLLASGFANYDGDKWAKHRKIVSPAFNVEKLKLLGPIFCEC 575
KE+ NKVY+FQK T PL K+L +G +YDGDKWA+HR+I++PAF++EK+K + +F E
Sbjct: 115 KEVFNKVYDFQKAHTFPLSKILGTGLVSYDGDKWAQHRRIINPAFHLEKIKNMVHVFHES 174
Query: 576 CDDM 587
C ++
Sbjct: 175 CSEL 178
>dbj|BAB02396.1| cytochrome P450 [Arabidopsis thaliana]
Length = 505
Score = 191 bits (485), Expect = 6e-48
Identities = 85/177 (48%), Positives = 120/177 (67%)
Frame = +3
Query: 57 ITTIGVISSVIATVVIWWIWSALNWVWLRPKRIERAMKQQGLQGNSYRPLVGDIRDMVKM 236
I+ V SV+ VV WW+W L WVW +PK +E +++QGL G Y PL+GD++ V M
Sbjct: 3 ISVACVTVSVVVVVVSWWVWRTLQWVWFKPKMLESYLRRQGLAGTPYTPLIGDLKRNVNM 62
Query: 237 IKEAKSKPMDPYSNDIAPRVLPFVVHTIAKYGKNSFMWLGPRPRLFIMDPDKIKEIANKV 416
+ EA SKP+ + DI PRVLP + +G+ F WLGP+P + IMDP+ IKE+ NKV
Sbjct: 63 LTEATSKPIK-LTEDITPRVLPHPFQMLKTHGRTFFTWLGPKPTITIMDPELIKEVFNKV 121
Query: 417 YEFQKPDTSPLFKLLASGFANYDGDKWAKHRKIVSPAFNVEKLKLLGPIFCECCDDM 587
Y++ K T L +L+A+G NYDGDKWAKHR+I++PAF++EK+K + P F + C D+
Sbjct: 122 YDYPKAQTFLLGRLIATGIINYDGDKWAKHRRIINPAFHIEKIKNMVPAFHQSCSDV 178
>ref|NP_188082.1| cytochrome P450, putative; protein id: At3g14640.1 [Arabidopsis
thaliana]
Length = 514
Score = 191 bits (485), Expect = 6e-48
Identities = 85/177 (48%), Positives = 120/177 (67%)
Frame = +3
Query: 57 ITTIGVISSVIATVVIWWIWSALNWVWLRPKRIERAMKQQGLQGNSYRPLVGDIRDMVKM 236
I+ V SV+ VV WW+W L WVW +PK +E +++QGL G Y PL+GD++ V M
Sbjct: 3 ISVACVTVSVVVVVVSWWVWRTLQWVWFKPKMLESYLRRQGLAGTPYTPLIGDLKRNVNM 62
Query: 237 IKEAKSKPMDPYSNDIAPRVLPFVVHTIAKYGKNSFMWLGPRPRLFIMDPDKIKEIANKV 416
+ EA SKP+ + DI PRVLP + +G+ F WLGP+P + IMDP+ IKE+ NKV
Sbjct: 63 LTEATSKPIK-LTEDITPRVLPHPFQMLKTHGRTFFTWLGPKPTITIMDPELIKEVFNKV 121
Query: 417 YEFQKPDTSPLFKLLASGFANYDGDKWAKHRKIVSPAFNVEKLKLLGPIFCECCDDM 587
Y++ K T L +L+A+G NYDGDKWAKHR+I++PAF++EK+K + P F + C D+
Sbjct: 122 YDYPKAQTFLLGRLIATGIINYDGDKWAKHRRIINPAFHIEKIKNMVPAFHQSCSDV 178
>ref|NP_188084.1| cytochrome P450, putative; protein id: At3g14660.1, supported by
cDNA: gi_18086481 [Arabidopsis thaliana]
gi|9294388|dbj|BAB02398.1| cytochrome P450 [Arabidopsis
thaliana] gi|18086482|gb|AAL57694.1| AT3g14660/MIE1_16
[Arabidopsis thaliana] gi|27754241|gb|AAO22574.1|
putative cytochrome P450 protein [Arabidopsis thaliana]
Length = 512
Score = 188 bits (477), Expect = 5e-47
Identities = 85/184 (46%), Positives = 127/184 (68%)
Frame = +3
Query: 36 MGISSSSITTIGVISSVIATVVIWWIWSALNWVWLRPKRIERAMKQQGLQGNSYRPLVGD 215
M IS +S+T SV VV WW+W L VWL+PK +E +++QGL G Y PLVGD
Sbjct: 1 MEISVASVTV-----SVAVVVVSWWVWRTLQRVWLKPKMLESYLRRQGLAGTPYTPLVGD 55
Query: 216 IRDMVKMIKEAKSKPMDPYSNDIAPRVLPFVVHTIAKYGKNSFMWLGPRPRLFIMDPDKI 395
++ M+ EA+SKP++ ++DI PR++P+ + + +G+ F W GP P + IMDP++I
Sbjct: 56 LKRNFSMLAEARSKPIN-LTDDITPRIVPYPLQMLKTHGRTFFTWFGPIPTITIMDPEQI 114
Query: 396 KEIANKVYEFQKPDTSPLFKLLASGFANYDGDKWAKHRKIVSPAFNVEKLKLLGPIFCEC 575
KE+ NKVY+FQK T PL +L+A+G +YDGDKW KHR+I++PAF++EK+K + P F +
Sbjct: 115 KEVFNKVYDFQKAHTFPLGRLIAAGLVSYDGDKWTKHRRIINPAFHLEKIKNMVPAFHQS 174
Query: 576 CDDM 587
C ++
Sbjct: 175 CSEI 178
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 564,810,389
Number of Sequences: 1393205
Number of extensions: 13037306
Number of successful extensions: 38846
Number of sequences better than 10.0: 450
Number of HSP's better than 10.0 without gapping: 37009
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38604
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22283372436
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
