Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC017247A_C01 KMC017247A_c01
(523 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC95354.1| receptor-like protein kinase [Arabidopsis thaliana] 118 4e-26
gb|AAM98174.1| protein kinase-like protein [Arabidopsis thaliana] 118 4e-26
ref|NP_194056.1| protein kinase - like protein; protein id: At4g... 118 5e-26
ref|NP_192886.1| serine/threonine kinase-like protein; protein i... 116 2e-25
ref|NP_194057.2| putative protein; protein id: At4g23260.1, supp... 113 1e-24
>gb|AAC95354.1| receptor-like protein kinase [Arabidopsis thaliana]
Length = 684
Score = 118 bits (296), Expect = 4e-26
Identities = 64/140 (45%), Positives = 90/140 (63%), Gaps = 1/140 (0%)
Frame = -2
Query: 522 FGVMILEIITGKKNLSSYELHRVMNGLLSYVWRQWKDQAPLTILDPTIKEAFFEFEVIKC 343
FGV+ILEII+GKKN S Y++ ++N L++YVW+ W+++ ++DP IKE EVI+
Sbjct: 545 FGVLILEIISGKKNSSFYQMDGLVNNLVTYVWKLWENKTMHELIDPFIKEDCKSDEVIRY 604
Query: 342 IHIGLLCVQENPDARPTMTTIVSYLSSHSIELPTPQEPAFSSRR-MSAQLTAQELSSFQS 166
+HIGLLCVQENP RPTM+TI L++ SI LP PQ P F R + ++Q + QS
Sbjct: 605 VHIGLLCVQENPADRPTMSTIHQVLTTSSITLPVPQPPGFFFRNGPGSNPSSQGMVPGQS 664
Query: 165 IKTSTIFSTNEMPISEFIPR 106
S S +E I++ PR
Sbjct: 665 SSKSFTSSVDEATITQVNPR 684
>gb|AAM98174.1| protein kinase-like protein [Arabidopsis thaliana]
Length = 608
Score = 118 bits (296), Expect = 4e-26
Identities = 64/140 (45%), Positives = 90/140 (63%), Gaps = 1/140 (0%)
Frame = -2
Query: 522 FGVMILEIITGKKNLSSYELHRVMNGLLSYVWRQWKDQAPLTILDPTIKEAFFEFEVIKC 343
FGV+ILEII+GKKN S Y++ ++N L++YVW+ W+++ ++DP IKE EVI+
Sbjct: 469 FGVLILEIISGKKNSSFYQMDGLVNNLVTYVWKLWENKTMHELIDPFIKEDCKSDEVIRY 528
Query: 342 IHIGLLCVQENPDARPTMTTIVSYLSSHSIELPTPQEPAFSSRR-MSAQLTAQELSSFQS 166
+HIGLLCVQENP RPTM+TI L++ SI LP PQ P F R + ++Q + QS
Sbjct: 529 VHIGLLCVQENPADRPTMSTIHQVLTTSSITLPVPQPPGFFFRNGPGSNPSSQGMVPGQS 588
Query: 165 IKTSTIFSTNEMPISEFIPR 106
S S +E I++ PR
Sbjct: 589 SSKSFTSSVDEATITQVNPR 608
>ref|NP_194056.1| protein kinase - like protein; protein id: At4g23250.1 [Arabidopsis
thaliana] gi|7488251|pir||T04842 protein kinase AK4 (EC
2.7.1.-) - Arabidopsis thaliana
gi|3021277|emb|CAA18472.1| protein kinase-like protein
[Arabidopsis thaliana] gi|7269173|emb|CAB79280.1|
protein kinase-like protein [Arabidopsis thaliana]
Length = 998
Score = 118 bits (295), Expect = 5e-26
Identities = 66/151 (43%), Positives = 94/151 (61%), Gaps = 1/151 (0%)
Frame = -2
Query: 522 FGVMILEIITGKKNLSSYELHRVMNGLLSYVWRQWKDQAPLTILDPTIKEAFFEFEVIKC 343
FGV+ILEII+GKKN S Y++ ++N L++YVW+ W+++ ++DP IKE EVI+
Sbjct: 528 FGVLILEIISGKKNSSFYQMDGLVNNLVTYVWKLWENKTMHELIDPFIKEDCKSDEVIRY 587
Query: 342 IHIGLLCVQENPDARPTMTTIVSYLSSHSIELPTPQEPAFSSRR-MSAQLTAQELSSFQS 166
+HIGLLCVQENP RPTM+TI L++ SI LP PQ P F R + ++Q + QS
Sbjct: 588 VHIGLLCVQENPADRPTMSTIHQVLTTSSITLPVPQPPGFFFRNGPGSNPSSQGMVPGQS 647
Query: 165 IKTSTIFSTNEMPISEFIPR*QVSIPIVCKF 73
S S +E I++ + I I C+F
Sbjct: 648 SSKSFTSSVDEATITQRRRKSYREIDIQCEF 678
>ref|NP_192886.1| serine/threonine kinase-like protein; protein id: At4g11470.1
[Arabidopsis thaliana] gi|7446366|pir||T10567 probable
serine/threonine-specific protein kinase (EC 2.7.1.-)
F25E4.90 - Arabidopsis thaliana
gi|7267847|emb|CAB78190.1| serine/threonine kinase-like
protein [Arabidopsis thaliana]
gi|7321044|emb|CAB82152.1| serine/threonine kinase-like
protein [Arabidopsis thaliana]
Length = 666
Score = 116 bits (290), Expect = 2e-25
Identities = 61/140 (43%), Positives = 84/140 (59%), Gaps = 1/140 (0%)
Frame = -2
Query: 522 FGVMILEIITGKKNLSSYELHRVMNGLLSYVWRQWKDQAPLTILDPTIKEAFFEFEVIKC 343
FGV+ILEI+ GKKN S +++ L+++VWR W + +PL ++DP IKE++ EVI+C
Sbjct: 527 FGVLILEIVCGKKNSSFFQMDDSGGNLVTHVWRLWNNDSPLDLIDPAIKESYDNDEVIRC 586
Query: 342 IHIGLLCVQENPDARPTMTTIVSYLSSHSIELPTPQEPAFSSR-RMSAQLTAQELSSFQS 166
IHIG+LCVQE P RP M+TI L++ SI LP P+ P F R R + QS
Sbjct: 587 IHIGILCVQETPADRPEMSTIFQMLTNSSITLPVPRPPGFFFRNRPNLDPLTYGSEQGQS 646
Query: 165 IKTSTIFSTNEMPISEFIPR 106
S FS + I+ PR
Sbjct: 647 SSMSVPFSIDSASITRATPR 666
>ref|NP_194057.2| putative protein; protein id: At4g23260.1, supported by cDNA:
gi_19699090 [Arabidopsis thaliana]
Length = 579
Score = 113 bits (283), Expect = 1e-24
Identities = 63/139 (45%), Positives = 86/139 (61%)
Frame = -2
Query: 522 FGVMILEIITGKKNLSSYELHRVMNGLLSYVWRQWKDQAPLTILDPTIKEAFFEFEVIKC 343
FGV+ILEII+GKKN S Y++ ++N L++YVW+ W++++ +LDP I + F EVI+
Sbjct: 447 FGVLILEIISGKKNSSFYQMDGLVNNLVTYVWKLWENKSLHELLDPFINQDFTSEEVIRY 506
Query: 342 IHIGLLCVQENPDARPTMTTIVSYLSSHSIELPTPQEPAFSSRRMSAQLTAQELSSFQSI 163
IHIGLLCVQENP RPTM+TI L++ SI LP P P F R + QS
Sbjct: 507 IHIGLLCVQENPADRPTMSTIHQMLTNSSITLPVPLPPGFFFRNGPGS------NPGQSN 560
Query: 162 KTSTIFSTNEMPISEFIPR 106
S S +E I++ PR
Sbjct: 561 SKSFACSVDEATITDVNPR 579
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 390,935,873
Number of Sequences: 1393205
Number of extensions: 7704203
Number of successful extensions: 19014
Number of sequences better than 10.0: 1098
Number of HSP's better than 10.0 without gapping: 17672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18157
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 16731298976
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
