Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC017225A_C01 KMC017225A_c01
(663 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA83350.1| Similar to Arabidopsis thaliana BAC F15P23 (AF12... 191 8e-48
ref|NP_564265.1| expressed protein; protein id: At1g26850.1, sup... 186 2e-46
gb|AAF27920.1|AF220204_1 unknown [Malus x domestica] 186 2e-46
ref|NP_191984.1| hypothetical protein; protein id: At4g00750.1 [... 183 2e-45
gb|AAL24268.1| AT4g00750/F15P23_1 [Arabidopsis thaliana] gi|2330... 183 2e-45
>dbj|BAA83350.1| Similar to Arabidopsis thaliana BAC F15P23 (AF128392) [Oryza sativa
(japonica cultivar-group)] gi|25553569|dbj|BAC24840.1|
OSJNBa0038F22.19 [Oryza sativa (japonica
cultivar-group)]
Length = 618
Score = 191 bits (485), Expect = 8e-48
Identities = 86/113 (76%), Positives = 102/113 (90%)
Frame = -1
Query: 660 ASTLGAIYERGLIGIYHDWCEAMSTYPRTYDLIHADSLFSLYNDRCKLEDILLEMDRILR 481
A+TLG IYERGLIG Y DWCEAMSTYPRTYDLIHA SLF++Y DRC++EDILLEMDR+LR
Sbjct: 506 ANTLGVIYERGLIGTYQDWCEAMSTYPRTYDLIHAYSLFTMYKDRCEMEDILLEMDRVLR 565
Query: 480 PEGAVIIRDDVDMLVKVKSIANGLEWDSVIVDHEDGPLVREKLLLAVKKYWTA 322
PEG VI RDDVD+LVK+K+IA+G+ W+S IVDHEDGP+ REK+L++VK YWTA
Sbjct: 566 PEGTVIFRDDVDVLVKIKNIADGMRWESRIVDHEDGPMQREKILVSVKSYWTA 618
>ref|NP_564265.1| expressed protein; protein id: At1g26850.1, supported by cDNA:
gi_14335101 [Arabidopsis thaliana]
gi|14335102|gb|AAK59830.1| At1g26850/T2P11_4
[Arabidopsis thaliana] gi|23308473|gb|AAN18206.1|
At1g26850/T2P11_4 [Arabidopsis thaliana]
Length = 616
Score = 186 bits (472), Expect = 2e-46
Identities = 85/114 (74%), Positives = 98/114 (85%)
Frame = -1
Query: 651 LGAIYERGLIGIYHDWCEAMSTYPRTYDLIHADSLFSLYNDRCKLEDILLEMDRILRPEG 472
LG +YERGLIGIYHDWCEA STYPRTYDLIHA+ LFSLY ++C +DILLEMDRILRPEG
Sbjct: 501 LGVVYERGLIGIYHDWCEAFSTYPRTYDLIHANHLFSLYKNKCNADDILLEMDRILRPEG 560
Query: 471 AVIIRDDVDMLVKVKSIANGLEWDSVIVDHEDGPLVREKLLLAVKKYWTAPATS 310
AVIIRDDVD L+KVK I G+ WD+ +VDHEDGPLV EK+L+AVK+YW +TS
Sbjct: 561 AVIIRDDVDTLIKVKRIIAGMRWDAKLVDHEDGPLVPEKVLIAVKQYWVTNSTS 614
>gb|AAF27920.1|AF220204_1 unknown [Malus x domestica]
Length = 608
Score = 186 bits (472), Expect = 2e-46
Identities = 83/118 (70%), Positives = 99/118 (83%)
Frame = -1
Query: 657 STLGAIYERGLIGIYHDWCEAMSTYPRTYDLIHADSLFSLYNDRCKLEDILLEMDRILRP 478
+TLG +YERGLIGIYHDWCE STYPRTYDLIHA +FS+YN +C EDILLEMDRILRP
Sbjct: 491 NTLGVVYERGLIGIYHDWCEGFSTYPRTYDLIHAHGVFSMYNGKCNWEDILLEMDRILRP 550
Query: 477 EGAVIIRDDVDMLVKVKSIANGLEWDSVIVDHEDGPLVREKLLLAVKKYWTAPATSGK 304
EGAVI RD+VD+L+KVK I G+ WD+ +VDHEDGPLV EK+L+AVK+YW +TS +
Sbjct: 551 EGAVIFRDEVDVLIKVKKIVGGMRWDTKLVDHEDGPLVPEKVLVAVKQYWVGNSTSAQ 608
>ref|NP_191984.1| hypothetical protein; protein id: At4g00750.1 [Arabidopsis
thaliana] gi|25372104|pir||C85010 hypothetical protein
AT4g00750 [imported] - Arabidopsis thaliana
gi|4325339|gb|AAD17339.1| F15P23.1 gene product
[Arabidopsis thaliana] gi|7267414|emb|CAB80884.1|
hypothetical protein [Arabidopsis thaliana]
Length = 633
Score = 183 bits (465), Expect = 2e-45
Identities = 83/114 (72%), Positives = 98/114 (85%)
Frame = -1
Query: 657 STLGAIYERGLIGIYHDWCEAMSTYPRTYDLIHADSLFSLYNDRCKLEDILLEMDRILRP 478
+TLG IYERGLIG Y +WCEAMSTYPRTYD IHADS+FSLY DRC +EDILLEMDRILRP
Sbjct: 513 NTLGVIYERGLIGTYQNWCEAMSTYPRTYDFIHADSVFSLYKDRCDMEDILLEMDRILRP 572
Query: 477 EGAVIIRDDVDMLVKVKSIANGLEWDSVIVDHEDGPLVREKLLLAVKKYWTAPA 316
+G+VIIRDD+D+L KVK I + ++W+ I DHE+GPL REK+L VK+YWTAPA
Sbjct: 573 KGSVIIRDDIDVLTKVKKITDAMQWEGRIGDHENGPLEREKILFLVKEYWTAPA 626
>gb|AAL24268.1| AT4g00750/F15P23_1 [Arabidopsis thaliana]
gi|23308277|gb|AAN18108.1| At4g00750/F15P23_1
[Arabidopsis thaliana]
Length = 150
Score = 183 bits (465), Expect = 2e-45
Identities = 83/114 (72%), Positives = 98/114 (85%)
Frame = -1
Query: 657 STLGAIYERGLIGIYHDWCEAMSTYPRTYDLIHADSLFSLYNDRCKLEDILLEMDRILRP 478
+TLG IYERGLIG Y +WCEAMSTYPRTYD IHADS+FSLY DRC +EDILLEMDRILRP
Sbjct: 30 NTLGVIYERGLIGTYQNWCEAMSTYPRTYDFIHADSVFSLYKDRCDMEDILLEMDRILRP 89
Query: 477 EGAVIIRDDVDMLVKVKSIANGLEWDSVIVDHEDGPLVREKLLLAVKKYWTAPA 316
+G+VIIRDD+D+L KVK I + ++W+ I DHE+GPL REK+L VK+YWTAPA
Sbjct: 90 KGSVIIRDDIDVLTKVKKITDAMQWEGRIGDHENGPLEREKILFLVKEYWTAPA 143
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 534,099,562
Number of Sequences: 1393205
Number of extensions: 11113015
Number of successful extensions: 31176
Number of sequences better than 10.0: 98
Number of HSP's better than 10.0 without gapping: 28868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30892
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 28572683052
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
