Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC017095A_C01 KMC017095A_c01
(508 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_193156.2| hypothetical protein; protein id: At4g14200.1, ... 73 2e-12
gb|AAL32591.1| Unknown protein [Arabidopsis thaliana] gi|2731193... 73 2e-12
pir||D71403 probable salt-inducible protein - Arabidopsis thalia... 73 2e-12
emb|CAC84112.1| salt inducible-like protein [Gossypium hirsutum] 48 7e-05
ref|NP_445792.1| opioid growth factor receptor [Rattus norvegicu... 33 1.9
>ref|NP_193156.2| hypothetical protein; protein id: At4g14200.1, supported by cDNA:
gi_17064873 [Arabidopsis thaliana]
Length = 784
Score = 72.8 bits (177), Expect = 2e-12
Identities = 36/95 (37%), Positives = 59/95 (61%), Gaps = 3/95 (3%)
Frame = -1
Query: 508 KSLLGEAANSSSKPESPNTEAHSVTQKNGNHGSGLKTVNSILGPESP---GDQVVKGDAA 338
K+LL EA + + ++ + E++++ + V+SILG E+ G K + +
Sbjct: 700 KNLLSEARSPRLQQQAKDHESNNIPR-----------VSSILGQETSPEDGHWPEKREVS 748
Query: 337 KEWNSPARYPAGIKREKSQIKSRPFWIPLVCCSSV 233
+EWNSPA+YP +KRE+ ++K RPFW+P VCCS+V
Sbjct: 749 EEWNSPAKYPVDLKREEKKVKGRPFWVPFVCCSNV 783
>gb|AAL32591.1| Unknown protein [Arabidopsis thaliana] gi|27311933|gb|AAO00932.1|
Unknown protein [Arabidopsis thaliana]
Length = 784
Score = 72.8 bits (177), Expect = 2e-12
Identities = 36/95 (37%), Positives = 59/95 (61%), Gaps = 3/95 (3%)
Frame = -1
Query: 508 KSLLGEAANSSSKPESPNTEAHSVTQKNGNHGSGLKTVNSILGPESP---GDQVVKGDAA 338
K+LL EA + + ++ + E++++ + V+SILG E+ G K + +
Sbjct: 700 KNLLSEARSPRLQQQAKDHESNNIPR-----------VSSILGQETSPEDGHWPEKREVS 748
Query: 337 KEWNSPARYPAGIKREKSQIKSRPFWIPLVCCSSV 233
+EWNSPA+YP +KRE+ ++K RPFW+P VCCS+V
Sbjct: 749 EEWNSPAKYPVDLKREEKKVKGRPFWVPFVCCSNV 783
>pir||D71403 probable salt-inducible protein - Arabidopsis thaliana
gi|2244775|emb|CAB10198.1| salt-inducible protein
homolog [Arabidopsis thaliana]
gi|7268124|emb|CAB78461.1| salt-inducible protein
homolog [Arabidopsis thaliana]
Length = 561
Score = 72.8 bits (177), Expect = 2e-12
Identities = 36/96 (37%), Positives = 59/96 (60%), Gaps = 3/96 (3%)
Frame = -1
Query: 508 KSLLGEAANSSSKPESPNTEAHSVTQKNGNHGSGLKTVNSILGPESP---GDQVVKGDAA 338
K+LL EA + + ++ + E++++ + V+SILG E+ G K + +
Sbjct: 53 KNLLSEARSPRLQQQAKDHESNNIPR-----------VSSILGQETSPEDGHWPEKREVS 101
Query: 337 KEWNSPARYPAGIKREKSQIKSRPFWIPLVCCSSVD 230
+EWNSPA+YP +KRE+ ++K RPFW+P VCCS+ D
Sbjct: 102 EEWNSPAKYPVDLKREEKKVKGRPFWVPFVCCSNED 137
>emb|CAC84112.1| salt inducible-like protein [Gossypium hirsutum]
Length = 66
Score = 47.8 bits (112), Expect = 7e-05
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = -1
Query: 397 VNSILGPESPGDQVVKGDAAKEWNSPARYPAGIKREKSQIK 275
V+S++GPE+P + +A KEW SPARYP+ KREK + K
Sbjct: 10 VSSMVGPETPMAEATNVEAEKEWKSPARYPSDRKREKRKAK 50
>ref|NP_445792.1| opioid growth factor receptor [Rattus norvegicus]
gi|28201844|sp|Q9QXY4|OGFR_RAT Opioid growth factor
receptor (OGFr) (Zeta-type opioid receptor)
gi|6693832|gb|AAF25002.1|AF156878_1 opioid growth factor
receptor [Rattus norvegicus]
Length = 580
Score = 33.1 bits (74), Expect = 1.9
Identities = 23/62 (37%), Positives = 30/62 (48%)
Frame = -1
Query: 493 EAANSSSKPESPNTEAHSVTQKNGNHGSGLKTVNSILGPESPGDQVVKGDAAKEWNSPAR 314
E NS PE PN++ V ++ N G + NS +GPE P QVV + A SP
Sbjct: 496 EDPNSQVGPEDPNSQ---VGPEDPNSQVGPEDPNSQVGPEDPNSQVVGPEQAAS-KSPVE 551
Query: 313 YP 308
P
Sbjct: 552 DP 553
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 450,061,028
Number of Sequences: 1393205
Number of extensions: 10035858
Number of successful extensions: 25866
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 25276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25858
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 15652649358
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
