Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC016967A_C01 KMC016967A_c01
(572 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||S49302 AWJL218 protein - wheat gi|551212|emb|CAA57134.1| AW... 71 8e-12
pir||S49300 AWJL236 protein - wheat gi|551214|emb|CAA57135.1| AW... 69 4e-11
dbj|BAB89969.1| putative Cf2/Cf5 disease resistance protein [Ory... 68 7e-11
pir||S49301 AWJL175 protein - wheat gi|551210|emb|CAA57133.1| AW... 68 9e-11
gb|AAM08720.1|AC116601_13 Putative Cf2/Cf5 disease resistance pr... 64 1e-09
>pir||S49302 AWJL218 protein - wheat gi|551212|emb|CAA57134.1| AWJL218 [Triticum
aestivum]
Length = 500
Score = 71.2 bits (173), Expect = 8e-12
Identities = 36/91 (39%), Positives = 52/91 (56%)
Frame = -3
Query: 564 NPYLCGSPLPNECPGDTSHQAPKSKNNEDEDDKKDKVEKVWFYFVIAVGFATGFWGVIGT 385
N LCG P+ C G+ ++ + D + K++ + + FYF + +GF G W V
Sbjct: 407 NNGLCGPPVHKNCSGNDAYI------HGDLESSKEEFDPLTFYFGLVLGFVVGLWMVFCA 460
Query: 384 LLFKKKWRHAYFRWVEDVADKIYVAVVIKVA 292
LLFKK WR AYFR + V D++YV VV+K A
Sbjct: 461 LLFKKTWRIAYFRLFDKVYDQVYVFVVVKWA 491
>pir||S49300 AWJL236 protein - wheat gi|551214|emb|CAA57135.1| AWJL236 [Triticum
aestivum]
Length = 391
Score = 68.9 bits (167), Expect = 4e-11
Identities = 38/85 (44%), Positives = 43/85 (49%), Gaps = 1/85 (1%)
Frame = -3
Query: 564 NPYLCGSPLPNECPGDTS-HQAPKSKNNEDEDDKKDKVEKVWFYFVIAVGFATGFWGVIG 388
N LCG PL C GDT H S N E E + FYF + +G G W V
Sbjct: 295 NNGLCGPPLHKNCSGDTIVHDHLGSSNQE--------FEPLTFYFGLVLGLVAGLWSVFC 346
Query: 387 TLLFKKKWRHAYFRWVEDVADKIYV 313
LFKK WR AYFR +D+ DKIYV
Sbjct: 347 VFLFKKTWRIAYFRLFDDLCDKIYV 371
>dbj|BAB89969.1| putative Cf2/Cf5 disease resistance protein [Oryza sativa (japonica
cultivar-group)] gi|20521202|dbj|BAB91720.1| putative
Cf2/Cf5 disease resistance protein [Oryza sativa
(japonica cultivar-group)]
Length = 862
Score = 68.2 bits (165), Expect = 7e-11
Identities = 35/91 (38%), Positives = 48/91 (52%)
Frame = -3
Query: 564 NPYLCGSPLPNECPGDTSHQAPKSKNNEDEDDKKDKVEKVWFYFVIAVGFATGFWGVIGT 385
NP LCG PL C ++++ K NE +D D + Y + GF G W V T
Sbjct: 771 NPGLCGLPLSTNC---STNRTNKIVQNEHDDASHDTT---YLYISTSAGFVVGLWIVFCT 824
Query: 384 LLFKKKWRHAYFRWVEDVADKIYVAVVIKVA 292
+LFKK WR AYF++ + + DKIYV + A
Sbjct: 825 ILFKKSWRIAYFQFFDQIYDKIYVQAAVSKA 855
>pir||S49301 AWJL175 protein - wheat gi|551210|emb|CAA57133.1| AWJL175 [Triticum
aestivum]
Length = 397
Score = 67.8 bits (164), Expect = 9e-11
Identities = 38/93 (40%), Positives = 48/93 (50%), Gaps = 2/93 (2%)
Frame = -3
Query: 564 NPYLCGSPLPNECPGDTS--HQAPKSKNNEDEDDKKDKVEKVWFYFVIAVGFATGFWGVI 391
N LCG P+ CPG+ S H KS N E + + FYF + + F G W V
Sbjct: 304 NSGLCGPPVHKNCPGNDSSIHGDLKSSNEE--------FDTLTFYFGLVLEFVVGLWMVF 355
Query: 390 GTLLFKKKWRHAYFRWVEDVADKIYVAVVIKVA 292
LLFKK WR AYFR + V D++YV +K A
Sbjct: 356 CALLFKKTWRIAYFRLFDKVYDQVYVFAAVKWA 388
>gb|AAM08720.1|AC116601_13 Putative Cf2/Cf5 disease resistance protein homolog [Oryza sativa]
Length = 833
Score = 64.3 bits (155), Expect = 1e-09
Identities = 33/85 (38%), Positives = 44/85 (50%)
Frame = -3
Query: 555 LCGSPLPNECPGDTSHQAPKSKNNEDEDDKKDKVEKVWFYFVIAVGFATGFWGVIGTLLF 376
LCG PL C + Q +++D ++FY+ +A GF G+W V LLF
Sbjct: 744 LCGPPLQRNCSSNGYAQGHGDHKGQEKDSNS-----MFFYYGLASGFVVGYWVVFCALLF 798
Query: 375 KKKWRHAYFRWVEDVADKIYVAVVI 301
K WR YF V+ V DK+YV VVI
Sbjct: 799 HKSWRVTYFCLVDKVYDKLYVYVVI 823
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 534,555,957
Number of Sequences: 1393205
Number of extensions: 11795187
Number of successful extensions: 46310
Number of sequences better than 10.0: 91
Number of HSP's better than 10.0 without gapping: 42472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46136
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 21243732558
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
