Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC016700A_C01 KMC016700A_c01
(536 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK31799.1| plasma membrane H+ ATPase [Lilium longiflorum] 168 4e-41
emb|CAB69823.1| plasma membrane H+ ATPase [Prunus persica] 167 7e-41
gb|AAB17186.1| plasma membrane H+-ATPase [Lycopersicon esculentum] 167 1e-40
sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4 (Proton pump 4) gi... 167 1e-40
pir||S50752 H+-exporting ATPase (EC 3.6.3.6) (clone PHA2) - pota... 167 1e-40
>gb|AAK31799.1| plasma membrane H+ ATPase [Lilium longiflorum]
Length = 950
Score = 168 bits (425), Expect = 4e-41
Identities = 84/109 (77%), Positives = 92/109 (84%), Gaps = 5/109 (4%)
Frame = -3
Query: 531 IRMGLSASAWDNMLQNKTAFTTKKDYGRGEREAQWAVAQRTLHGLQVPEAH-----KNNH 367
IR LS AWDN++QNKTAFT+KKDYG+GEREAQWA AQRTLHGLQ + KNN+
Sbjct: 842 IRYALSGRAWDNLIQNKTAFTSKKDYGKGEREAQWATAQRTLHGLQTADTSNLFNDKNNY 901
Query: 366 HEHSEIAEQAKRRAEAARLKELHTLKGHVESVVKLKGLDIETIQQHYTV 220
E SEIAEQAKRRAE ARL+ELHTLKGHVESVVKLKGLDI+TIQQHYTV
Sbjct: 902 RELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 950
>emb|CAB69823.1| plasma membrane H+ ATPase [Prunus persica]
Length = 954
Score = 167 bits (423), Expect = 7e-41
Identities = 85/109 (77%), Positives = 93/109 (84%), Gaps = 5/109 (4%)
Frame = -3
Query: 531 IRMGLSASAWDNMLQNKTAFTTKKDYGRGEREAQWAVAQRTLHGLQVPEAH-----KNNH 367
IR LS AWDN+L+NKTAFTTKKDYG+ EREAQWA AQRTLHGLQ PE + KN++
Sbjct: 846 IRYILSGKAWDNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPPETNNLFSEKNSY 905
Query: 366 HEHSEIAEQAKRRAEAARLKELHTLKGHVESVVKLKGLDIETIQQHYTV 220
E SEIAEQAKRRAE ARL+ELHTLKGHVESVVKLKGLDI+TIQQHYTV
Sbjct: 906 RELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 954
>gb|AAB17186.1| plasma membrane H+-ATPase [Lycopersicon esculentum]
Length = 952
Score = 167 bits (422), Expect = 1e-40
Identities = 86/109 (78%), Positives = 93/109 (84%), Gaps = 5/109 (4%)
Frame = -3
Query: 531 IRMGLSASAWDNMLQNKTAFTTKKDYGRGEREAQWAVAQRTLHGLQVPEA-----HKNNH 367
IR LS AW+N+L NKTAFTTKKDYG+ EREAQWA+AQRTLHGLQ PEA KN++
Sbjct: 844 IRYILSGKAWNNLLDNKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPEASNLFNEKNSY 903
Query: 366 HEHSEIAEQAKRRAEAARLKELHTLKGHVESVVKLKGLDIETIQQHYTV 220
E SEIAEQAKRRAE ARL+ELHTLKGHVESVVKLKGLDIETIQQHYTV
Sbjct: 904 RELSEIAEQAKRRAEMARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 952
>sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4 (Proton pump 4) gi|485504|pir||S33548
H+-exporting ATPase (EC 3.6.3.6) type 4, plasma membrane
- curled-leaved tobacco gi|19704|emb|CAA47275.1| plasma
membrane H+-ATPase [Nicotiana plumbaginifolia]
Length = 952
Score = 167 bits (422), Expect = 1e-40
Identities = 86/109 (78%), Positives = 93/109 (84%), Gaps = 5/109 (4%)
Frame = -3
Query: 531 IRMGLSASAWDNMLQNKTAFTTKKDYGRGEREAQWAVAQRTLHGLQVPEA-----HKNNH 367
IR LS AW+N+L NKTAFTTKKDYG+ EREAQWA+AQRTLHGLQ PEA KN++
Sbjct: 844 IRYILSGKAWNNLLDNKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPEATNLFNEKNSY 903
Query: 366 HEHSEIAEQAKRRAEAARLKELHTLKGHVESVVKLKGLDIETIQQHYTV 220
E SEIAEQAKRRAE ARL+ELHTLKGHVESVVKLKGLDIETIQQHYTV
Sbjct: 904 RELSEIAEQAKRRAEMARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 952
>pir||S50752 H+-exporting ATPase (EC 3.6.3.6) (clone PHA2) - potato
gi|435001|emb|CAA54045.1| H(+)-transporting ATPase
[Solanum tuberosum]
Length = 952
Score = 167 bits (422), Expect = 1e-40
Identities = 86/109 (78%), Positives = 93/109 (84%), Gaps = 5/109 (4%)
Frame = -3
Query: 531 IRMGLSASAWDNMLQNKTAFTTKKDYGRGEREAQWAVAQRTLHGLQVPEA-----HKNNH 367
IR LS AW+N+L NKTAFTTKKDYG+ EREAQWA+AQRTLHGLQ PEA KN++
Sbjct: 844 IRYILSGKAWNNLLDNKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPEASNLFNEKNSY 903
Query: 366 HEHSEIAEQAKRRAEAARLKELHTLKGHVESVVKLKGLDIETIQQHYTV 220
E SEIAEQAKRRAE ARL+ELHTLKGHVESVVKLKGLDIETIQQHYTV
Sbjct: 904 RELSEIAEQAKRRAEMARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 952
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 464,074,512
Number of Sequences: 1393205
Number of extensions: 9651467
Number of successful extensions: 28322
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 27165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28229
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 18173652336
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
