Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC016636A_C01 KMC016636A_c01
(426 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_565447.1| subtilisin-like serine protease; protein id: At... 69 2e-11
ref|NP_567839.1| subtilisin-like serine protease; protein id: At... 67 5e-11
pir||T07617 proteinase TMP - tomato gi|1732367|gb|AAB38743.1| pr... 41 0.004
gb|AAF13299.1|AF181496_1 meiotic serine proteinase [Lycopersicon... 41 0.004
dbj|BAA04839.1| serine proteinase [Lilium longiflorum] 36 0.13
>ref|NP_565447.1| subtilisin-like serine protease; protein id: At2g19170.1, supported
by cDNA: gi_15293150 [Arabidopsis thaliana]
gi|7435670|pir||T00538 probable serine proteinase
At2g19170 [imported] - Arabidopsis thaliana
gi|3176726|gb|AAD12040.1| subtilisin-like serine
protease [Arabidopsis thaliana]
gi|15293151|gb|AAK93686.1| putative subtilisin serine
protease [Arabidopsis thaliana]
gi|22136832|gb|AAM91760.1| putative subtilisin serine
protease [Arabidopsis thaliana]
Length = 815
Score = 68.6 bits (166), Expect = 2e-11
Identities = 32/44 (72%), Positives = 39/44 (87%)
Frame = -2
Query: 425 ASRKFTVTLTVRSVTGTYSFGEVMMKGSRGHKVRIPVLANGYSR 294
A+R F+VT+TVRSV+G YSFGEV +KGSRGHKVRIPV+A G+ R
Sbjct: 772 ATRTFSVTMTVRSVSGVYSFGEVKLKGSRGHKVRIPVVALGHRR 815
>ref|NP_567839.1| subtilisin-like serine protease; protein id: At4g30020.1
[Arabidopsis thaliana] gi|7435669|pir||T08978 serine
proteinase homolog F6G3.50 - Arabidopsis thaliana
gi|4938478|emb|CAB43837.1| proteinase-like protein
[Arabidopsis thaliana] gi|7269902|emb|CAB80995.1| EST
GB:N37377 spans last intron and 3' end of gene~strong
similarity to Lycopersicon esculentum proteinase TMP,
Pir2:T07617~Contains Growth factor and cytokines
receptors family signatures AA570-576;Serine proteases,
subtilase family, active sites AA156-166;Serine
proteases, subtilase family, active sites
AA595-605~contains EST gb:N37377, AI997630.1
[Arabidopsis thaliana] gi|22655014|gb|AAM98098.1|
AT4g30020/F6G3_50 [Arabidopsis thaliana]
gi|29028756|gb|AAO64757.1| AT4g30020/F6G3_50
[Arabidopsis thaliana]
Length = 816
Score = 67.0 bits (162), Expect = 5e-11
Identities = 32/44 (72%), Positives = 37/44 (83%)
Frame = -2
Query: 425 ASRKFTVTLTVRSVTGTYSFGEVMMKGSRGHKVRIPVLANGYSR 294
ASR F+VTLTVRSVTG YSFG+V +KGSRGHKV +PV+A G R
Sbjct: 773 ASRTFSVTLTVRSVTGAYSFGQVTLKGSRGHKVTLPVVAMGQRR 816
>pir||T07617 proteinase TMP - tomato gi|1732367|gb|AAB38743.1| proteinase TMP
[Lycopersicon esculentum]
Length = 801
Score = 40.8 bits (94), Expect = 0.004
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = -2
Query: 425 ASRKFTVTLTVRSVTGTYSFGEVMMKGSRGHKVRIPV 315
AS+ T L T TYSFGE++ +G++ H VR+P+
Sbjct: 755 ASKHITFVLNATQTTNTYSFGEIVFQGNQNHTVRVPL 791
>gb|AAF13299.1|AF181496_1 meiotic serine proteinase [Lycopersicon esculentum]
Length = 809
Score = 40.8 bits (94), Expect = 0.004
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = -2
Query: 425 ASRKFTVTLTVRSVTGTYSFGEVMMKGSRGHKVRIPV 315
AS+ T L T TYSFGE++ +G++ H VR+P+
Sbjct: 763 ASKHITFVLNATQTTNTYSFGEIVFQGNQNHTVRVPL 799
>dbj|BAA04839.1| serine proteinase [Lilium longiflorum]
Length = 813
Score = 35.8 bits (81), Expect = 0.13
Identities = 15/37 (40%), Positives = 23/37 (61%)
Frame = -2
Query: 422 SRKFTVTLTVRSVTGTYSFGEVMMKGSRGHKVRIPVL 312
S+ + L VT Y+FGEV++ G + H VRIP++
Sbjct: 769 SKGLAILLDAVEVTNAYTFGEVVLNGDKKHVVRIPLV 805
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 350,927,928
Number of Sequences: 1393205
Number of extensions: 6835127
Number of successful extensions: 14750
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14748
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 6856422288
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
