Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC016613A_C01 KMC016613A_c01
(558 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_201453.1| selenium-binding protein-like; protein id: At5g... 94 1e-18
ref|NP_181820.1| hypothetical protein; protein id: At2g42920.1 [... 87 1e-16
ref|NP_187175.1| hypothetical protein; protein id: At3g05240.1 [... 82 3e-15
gb|AAO45757.1| selenium binding protein-like protein [Cucumis melo] 82 4e-15
ref|NP_172286.1| unknown protein; protein id: At1g08070.1 [Arabi... 76 2e-13
>ref|NP_201453.1| selenium-binding protein-like; protein id: At5g66520.1 [Arabidopsis
thaliana] gi|10177533|dbj|BAB10928.1| selenium-binding
protein-like [Arabidopsis thaliana]
Length = 620
Score = 93.6 bits (231), Expect = 1e-18
Identities = 48/114 (42%), Positives = 67/114 (58%), Gaps = 1/114 (0%)
Frame = +1
Query: 217 MTLFNRCSTMNHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDK 396
M+ RCS LK+IHAR+ +TG Q+ + K + FC S + + YA VFD D+
Sbjct: 18 MSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDR 77
Query: 397 PDAFLWNTMIRGFGNTNQPEKAVLFYKRMQ-QGEPHVVPDTFTFSFLLKIVGGL 555
PD FLWN MIRGF +++PE+++L Y+RM PH + +TF LLK L
Sbjct: 78 PDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPH---NAYTFPSLLKACSNL 128
Score = 50.8 bits (120), Expect = 1e-05
Identities = 30/112 (26%), Positives = 59/112 (51%), Gaps = 3/112 (2%)
Frame = +1
Query: 163 VCTMSPKDATLWKAQQTLMTLFNRCSTMNHLKE---IHARIYQTGFHQNHLVVGKIIVFC 333
+C+ +P +A T +L CS ++ +E IHA+I + G+ + V +I
Sbjct: 107 LCSSAPHNA------YTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSY 160
Query: 334 AVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQ 489
AV+ G+ A +FDR+ +PD WN++I+G+ + + A+ +++M +
Sbjct: 161 AVT---GNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAE 209
>ref|NP_181820.1| hypothetical protein; protein id: At2g42920.1 [Arabidopsis
thaliana] gi|25346328|pir||H84859 hypothetical protein
At2g42920 [imported] - Arabidopsis thaliana
gi|4512663|gb|AAD21717.1| hypothetical protein
[Arabidopsis thaliana] gi|20197867|gb|AAM15291.1|
hypothetical protein [Arabidopsis thaliana]
Length = 559
Score = 87.4 bits (215), Expect = 1e-16
Identities = 43/115 (37%), Positives = 64/115 (55%)
Frame = +1
Query: 214 LMTLFNRCSTMNHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVD 393
L + +CSTM LK+IHA + +TG + + +++ FC S DMNYA VF R++
Sbjct: 28 LRLIDTQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCAS--PSDMNYAYLVFTRIN 85
Query: 394 KPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLG 558
+ F+WNT+IRGF ++ PE A+ + M P V P T+ + K G LG
Sbjct: 86 HKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLG 140
Score = 41.6 bits (96), Expect = 0.007
Identities = 28/109 (25%), Positives = 54/109 (48%), Gaps = 4/109 (3%)
Frame = +1
Query: 211 TLMTLFNRCSTMNHLKE---IHARIYQTGFHQNHLVVGKII-VFCAVSVPAGDMNYAVSV 378
T+++L N C+ + ++ IH I + F N +VV +I ++C G + ++V
Sbjct: 260 TMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCK----CGCIEEGLNV 315
Query: 379 FDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTF 525
F+ K WN+MI G N E+A+ + +++ + PD+ +F
Sbjct: 316 FECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERS--GLEPDSVSF 362
Score = 38.1 bits (87), Expect = 0.074
Identities = 23/69 (33%), Positives = 36/69 (51%)
Frame = +1
Query: 352 GDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSF 531
G ++ A ++FD + + + WN+MI GF + + A+ ++ MQ E V PD FT
Sbjct: 206 GLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQ--EKDVKPDGFTMVS 263
Query: 532 LLKIVGGLG 558
LL LG
Sbjct: 264 LLNACAYLG 272
>ref|NP_187175.1| hypothetical protein; protein id: At3g05240.1 [Arabidopsis
thaliana] gi|6729034|gb|AAF27030.1|AC009177_20
hypothetical protein [Arabidopsis thaliana]
Length = 548
Score = 82.4 bits (202), Expect = 3e-15
Identities = 37/119 (31%), Positives = 70/119 (58%)
Frame = +1
Query: 199 KAQQTLMTLFNRCSTMNHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSV 378
K + +++ C ++ L ++H + ++ +N + + ++I FC +++YA SV
Sbjct: 4 KHYKPILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSV 63
Query: 379 FDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGL 555
F+ +D P ++WN+MIRG+ N+ P+KA++FY+ M + PD FTF ++LK GL
Sbjct: 64 FESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLR--KGYSPDYFTFPYVLKACSGL 120
Score = 40.0 bits (92), Expect = 0.019
Identities = 20/75 (26%), Positives = 40/75 (52%)
Frame = +1
Query: 262 IHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDAFLWNTMIRGFGN 441
+H + +TGF N V ++ + + G++NY + VF+ + + + W ++I GF N
Sbjct: 129 VHGFVVKTGFEVNMYVSTCLL---HMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVN 185
Query: 442 TNQPEKAVLFYKRMQ 486
N+ A+ ++ MQ
Sbjct: 186 NNRFSDAIEAFREMQ 200
>gb|AAO45757.1| selenium binding protein-like protein [Cucumis melo]
Length = 565
Score = 82.0 bits (201), Expect = 4e-15
Identities = 41/115 (35%), Positives = 68/115 (58%)
Frame = +1
Query: 211 TLMTLFNRCSTMNHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRV 390
T+++ +C TM LK+IH+ + +T +N + ++I FCA S GD+ YA +VFD+
Sbjct: 7 TILSFLEKCKTMKELKQIHSLMIKTSVVKNIIPCSRLIDFCANS-ELGDIEYARTVFDQT 65
Query: 391 DKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGL 555
D+ ++WN+MI+G+ N A+ Y+ MQ+ PD FTF F+LK+ +
Sbjct: 66 DQLTVYVWNSMIKGYCNGGDKFGALFMYEEMQR--KGFYPDHFTFPFVLKVCSAI 118
Score = 52.0 bits (123), Expect = 5e-06
Identities = 30/119 (25%), Positives = 61/119 (51%), Gaps = 3/119 (2%)
Frame = +1
Query: 211 TLMTLFNRCSTMNHL---KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVF 381
T +++ C+ + + +HAR+ + FH+ + +G ++ + +GD + A+ +F
Sbjct: 316 TFLSVIRACTHLRFRSTGQSLHARVLKANFHE-FVAIGTALM--DMYAKSGDADTALKIF 372
Query: 382 DRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLKIVGGLG 558
++ K D W TMI G + ++A+ ++RM++ E V PD T+ +L LG
Sbjct: 373 SKLRKKDVMAWTTMISGLAIQGKGKEALNVFRRMEE-EAEVAPDQITYIAVLWACSHLG 430
Score = 47.8 bits (112), Expect = 9e-05
Identities = 28/87 (32%), Positives = 47/87 (53%), Gaps = 3/87 (3%)
Frame = +1
Query: 235 CSTMNHL---KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDKPDA 405
CS ++ L + +H RI +TGF L V + V GD+N + VF+ + K +
Sbjct: 115 CSAIDLLVYGQSVHNRIVKTGFE---LDVYTSSCLLNMYVSCGDLNSGLKVFEFIPKWNV 171
Query: 406 FLWNTMIRGFGNTNQPEKAVLFYKRMQ 486
W ++I GF N +QP++A+ +K M+
Sbjct: 172 VAWTSLIAGFVNNDQPKEALRLFKDME 198
Score = 31.6 bits (70), Expect = 6.9
Identities = 27/116 (23%), Positives = 53/116 (45%), Gaps = 6/116 (5%)
Frame = +1
Query: 211 TLMTLFNRCSTMNHLKEIHARIYQTG---FHQNHLVVGKIIVFCAVS---VPAGDMNYAV 372
T + RC ++ K + R+ Q G FH N +I+ A+ G + A
Sbjct: 211 TALAAAARCRDIHTGKLVRYRLRQLGLDPFHTNSRF--NVILATAIMDMYAKCGKLVTAR 268
Query: 373 SVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLK 540
++FD++ + + +WN+MI F + +A+ + M+ VP+ TF +++
Sbjct: 269 NLFDKMPQRNLVVWNSMISAFSQYGRGAEALRLFVDMELA--GFVPNKATFLSVIR 322
>ref|NP_172286.1| unknown protein; protein id: At1g08070.1 [Arabidopsis thaliana]
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15
[Arabidopsis thaliana]
Length = 741
Score = 76.3 bits (186), Expect = 2e-13
Identities = 36/108 (33%), Positives = 63/108 (58%)
Frame = +1
Query: 217 MTLFNRCSTMNHLKEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVSVFDRVDK 396
++L + C T+ L+ IHA++ + G H + + K+I FC +S + YA+SVF + +
Sbjct: 37 LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96
Query: 397 PDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFTFSFLLK 540
P+ +WNTM RG ++ P A+ Y M ++P+++TF F+LK
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMI--SLGLLPNSYTFPFVLK 142
Score = 46.2 bits (108), Expect = 3e-04
Identities = 31/122 (25%), Positives = 60/122 (48%), Gaps = 4/122 (3%)
Frame = +1
Query: 205 QQTLMTLFNRCSTMNHL---KEIHARIYQTGFHQNHLVVGKIIVFCAVSVPAGDMNYAVS 375
+ T++T+ + C+ + +++H I GF N +V +I + G++ A
Sbjct: 266 ESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYS---KCGELETACG 322
Query: 376 VFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRM-QQGEPHVVPDTFTFSFLLKIVGG 552
+F+R+ D WNT+I G+ + N ++A+L ++ M + GE P+ T +L
Sbjct: 323 LFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE---TPNDVTMLSILPACAH 379
Query: 553 LG 558
LG
Sbjct: 380 LG 381
Score = 33.1 bits (74), Expect = 2.4
Identities = 18/57 (31%), Positives = 28/57 (48%)
Frame = +1
Query: 352 GDMNYAVSVFDRVDKPDAFLWNTMIRGFGNTNQPEKAVLFYKRMQQGEPHVVPDTFT 522
G + A +FD + D WN MI G+ T ++A+ +K M + +V PD T
Sbjct: 214 GYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMM--KTNVRPDEST 268
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 506,244,701
Number of Sequences: 1393205
Number of extensions: 11827884
Number of successful extensions: 39046
Number of sequences better than 10.0: 433
Number of HSP's better than 10.0 without gapping: 35814
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38805
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 19808345223
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
