Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC016596A_C01 KMC016596A_c01
(535 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAA96137.1| peroxidase 176 1e-43
dbj|BAA82306.1| peroxidase [Nicotiana tabacum] 169 2e-41
gb|AAO13838.1|AF405326_1 peroxidase 2 [Lupinus albus] 161 5e-39
emb|CAD67479.1| peroxidase [Asparagus officinalis] 159 2e-38
gb|AAL93151.1|AF485265_1 gaiacol peroxidase [Gossypium hirsutum] 157 8e-38
>gb|AAA96137.1| peroxidase
Length = 136
Score = 176 bits (447), Expect = 1e-43
Identities = 82/127 (64%), Positives = 107/127 (83%)
Frame = -2
Query: 534 TIGRSRCTSFRNHIDHGSHIDSTFAKAQQRNCPQASGSGDHHLAVLDVRTPNHFDHNYFQ 355
TIG++RCTSFR HI + + ID +FAK +Q+NCP+ SG+GD +LA LD++TP HF++NY++
Sbjct: 10 TIGQARCTSFRGHIYNDTDIDPSFAKLRQKNCPRQSGTGDSNLAPLDLQTPTHFENNYYK 69
Query: 354 NLIIQRGLLHSDPELFHGGSPNSLVRAYSQNGKAFRSDFVTAMIKMGNHQPLTGSKGEIR 175
NLI ++GLLHSD ELF+GGS +SLV+ YS+N KAF SDFV MIKMG+ PLTGSKGEIR
Sbjct: 70 NLINKKGLLHSDQELFNGGSTDSLVQTYSKNNKAFTSDFVPGMIKMGDLLPLTGSKGEIR 129
Query: 174 KNCRRLH 154
KNCRR++
Sbjct: 130 KNCRRMN 136
>dbj|BAA82306.1| peroxidase [Nicotiana tabacum]
Length = 321
Score = 169 bits (427), Expect = 2e-41
Identities = 79/128 (61%), Positives = 109/128 (84%), Gaps = 1/128 (0%)
Frame = -2
Query: 534 TIGRSRCTSFRNHI-DHGSHIDSTFAKAQQRNCPQASGSGDHHLAVLDVRTPNHFDHNYF 358
TIG++RCTSFR I + +++D++FA+ +Q NCP++SGSGD++LA LD++TPN FD+NYF
Sbjct: 194 TIGQARCTSFRARIYNETNNLDASFARTRQSNCPRSSGSGDNNLAPLDLQTPNKFDNNYF 253
Query: 357 QNLIIQRGLLHSDPELFHGGSPNSLVRAYSQNGKAFRSDFVTAMIKMGNHQPLTGSKGEI 178
+NL+ ++GLLHSD +LF+GGS +S+V +YS N +F SDFVTAMIKMG+ +PLTGS GEI
Sbjct: 254 KNLVDKKGLLHSDQQLFNGGSADSIVTSYSNNPSSFSSDFVTAMIKMGDIRPLTGSNGEI 313
Query: 177 RKNCRRLH 154
RKNCRRL+
Sbjct: 314 RKNCRRLN 321
>gb|AAO13838.1|AF405326_1 peroxidase 2 [Lupinus albus]
Length = 260
Score = 161 bits (407), Expect = 5e-39
Identities = 78/127 (61%), Positives = 102/127 (79%), Gaps = 2/127 (1%)
Frame = -2
Query: 534 TIGRSRCTSFRNHIDHGSHIDSTFAKAQQRNCPQASGSG--DHHLAVLDVRTPNHFDHNY 361
TIG++RC+S+R+ I ++ID FAK++QRNCP+ S D+++AVLD +TP HFD+ Y
Sbjct: 132 TIGKARCSSYRDRIYDDTNIDKLFAKSRQRNCPRKSSGTVKDNNVAVLDFKTPTHFDNLY 191
Query: 360 FQNLIIQRGLLHSDPELFHGGSPNSLVRAYSQNGKAFRSDFVTAMIKMGNHQPLTGSKGE 181
++NLI ++GLLHSD ELF+GGS +SLV YS N KAF SDFVTAMIKMGN +PLTGS G+
Sbjct: 192 YKNLINKKGLLHSDQELFNGGSTDSLVTTYSNNEKAFNSDFVTAMIKMGNIKPLTGSNGQ 251
Query: 180 IRKNCRR 160
IRK+CRR
Sbjct: 252 IRKHCRR 258
>emb|CAD67479.1| peroxidase [Asparagus officinalis]
Length = 320
Score = 159 bits (402), Expect = 2e-38
Identities = 74/125 (59%), Positives = 97/125 (77%)
Frame = -2
Query: 534 TIGRSRCTSFRNHIDHGSHIDSTFAKAQQRNCPQASGSGDHHLAVLDVRTPNHFDHNYFQ 355
TIG++RCT+FR H+ + + ID+TFAK +Q NCP SGSGD++LA LD++TP FD+NYF+
Sbjct: 194 TIGQARCTNFRAHVYNDTDIDATFAKTRQSNCPSTSGSGDNNLAPLDLQTPVAFDNNYFK 253
Query: 354 NLIIQRGLLHSDPELFHGGSPNSLVRAYSQNGKAFRSDFVTAMIKMGNHQPLTGSKGEIR 175
NL+ ++GLLHSD ++F GGS NS V YS + + SDFV AMIKMG+ PLTG GEIR
Sbjct: 254 NLVSKKGLLHSDQQVFSGGSTNSQVSTYSTSPSTWSSDFVAAMIKMGDISPLTGKSGEIR 313
Query: 174 KNCRR 160
KNCR+
Sbjct: 314 KNCRK 318
>gb|AAL93151.1|AF485265_1 gaiacol peroxidase [Gossypium hirsutum]
Length = 320
Score = 157 bits (397), Expect = 8e-38
Identities = 74/123 (60%), Positives = 97/123 (78%)
Frame = -2
Query: 534 TIGRSRCTSFRNHIDHGSHIDSTFAKAQQRNCPQASGSGDHHLAVLDVRTPNHFDHNYFQ 355
TIG++RC FRN I + + ID++FAK ++ +CP+ GSGD++LA LD+ TPN FD YF+
Sbjct: 194 TIGKARCLVFRNRIYNDTIIDTSFAKTRRSSCPRTRGSGDNNLAPLDLATPNSFDSKYFE 253
Query: 354 NLIIQRGLLHSDPELFHGGSPNSLVRAYSQNGKAFRSDFVTAMIKMGNHQPLTGSKGEIR 175
NL+ ++GLLHSD ELF+GGS +SLV+ YS N K F SDF+ AMIKMG+ +PLTGS GEIR
Sbjct: 254 NLLNKKGLLHSDQELFNGGSTDSLVKTYSSNVKKFYSDFIAAMIKMGDIKPLTGSNGEIR 313
Query: 174 KNC 166
KNC
Sbjct: 314 KNC 316
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 488,901,593
Number of Sequences: 1393205
Number of extensions: 11332204
Number of successful extensions: 27806
Number of sequences better than 10.0: 425
Number of HSP's better than 10.0 without gapping: 26340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27324
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17885181664
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
