Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC016557A_C01 KMC016557A_c01
(559 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_564084.1| expressed protein; protein id: At1g19430.1, sup... 156 2e-37
gb|AAN65023.1| unknown protein [Oryza sativa (japonica cultivar-... 140 8e-33
dbj|BAB90379.1| ankyrin-like protein [Oryza sativa (japonica cul... 110 1e-23
gb|AAM78114.1| AT5g64030/MBM17_13 [Arabidopsis thaliana] gi|2776... 106 2e-22
ref|NP_201208.1| ankyrin-like protein; protein id: At5g64030.1 [... 106 2e-22
>ref|NP_564084.1| expressed protein; protein id: At1g19430.1, supported by cDNA:
gi_15810124 [Arabidopsis thaliana]
gi|8778438|gb|AAF79446.1|AC025808_28 F18O14.20
[Arabidopsis thaliana] gi|15810125|gb|AAL07206.1|
unknown protein [Arabidopsis thaliana]
gi|25054951|gb|AAN71952.1| unknown protein [Arabidopsis
thaliana]
Length = 724
Score = 156 bits (394), Expect = 2e-37
Identities = 70/85 (82%), Positives = 77/85 (90%)
Frame = -1
Query: 559 YPRSYDLLHVDHLFSRLKNRCKQPVSIVVEMDRILRPGGWTIIRDKVEILNALEEILRSM 380
YPRSYDLLH DHLFSRLKNRCKQP SIVVEMDR+ RPGGW ++RDKVEIL LEEILRS+
Sbjct: 640 YPRSYDLLHADHLFSRLKNRCKQPASIVVEMDRLTRPGGWVVVRDKVEILEPLEEILRSL 699
Query: 379 QWEIRMSFNQDKEGILCAQKTLWRP 305
WEIRM++ QDKEG+LCAQKTLWRP
Sbjct: 700 HWEIRMTYAQDKEGMLCAQKTLWRP 724
Score = 32.0 bits (71), Expect = 5.3
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Frame = -1
Query: 481 IVVEMDRILRPGGWTII---RDKVEILNALEEILRSMQWEI 368
+++EM+RILRP G+ I+ DK+E A+ + S+ W I
Sbjct: 427 LLLEMNRILRPNGYFILSSNNDKIEDDEAMTALTASICWNI 467
>gb|AAN65023.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 729
Score = 140 bits (354), Expect = 8e-33
Identities = 64/85 (75%), Positives = 74/85 (86%)
Frame = -1
Query: 559 YPRSYDLLHVDHLFSRLKNRCKQPVSIVVEMDRILRPGGWTIIRDKVEILNALEEILRSM 380
YPRSYDLLH DHLFSRL NRCKQPVSIVVEMDRILRPGGW IIR+K+EIL+ LE+IL+S+
Sbjct: 645 YPRSYDLLHADHLFSRLNNRCKQPVSIVVEMDRILRPGGWAIIREKLEILDPLEKILKSL 704
Query: 379 QWEIRMSFNQDKEGILCAQKTLWRP 305
WEI M+F +DK GI+ +KT WRP
Sbjct: 705 HWEIVMAFRKDKAGIMSVKKTTWRP 729
Score = 32.0 bits (71), Expect = 5.3
Identities = 19/48 (39%), Positives = 30/48 (61%), Gaps = 3/48 (6%)
Frame = -1
Query: 481 IVVEMDRILRPGGWTIIRDKVEILNALEEILRSMQ---WEIRMSFNQD 347
+++E++RILRPGG+ II K L + E I SM W + +++N D
Sbjct: 431 LLLEINRILRPGGYFIISSKHGDLESEEGISASMTAICWNV-IAYNSD 477
>dbj|BAB90379.1| ankyrin-like protein [Oryza sativa (japonica cultivar-group)]
Length = 806
Score = 110 bits (275), Expect = 1e-23
Identities = 47/85 (55%), Positives = 66/85 (77%)
Frame = -1
Query: 559 YPRSYDLLHVDHLFSRLKNRCKQPVSIVVEMDRILRPGGWTIIRDKVEILNALEEILRSM 380
YPR+YDLLH DHLFS+LK RCK + + E+DRILRP G I+RD E +N L+ +++S+
Sbjct: 716 YPRTYDLLHADHLFSKLKKRCKL-LPVFAEVDRILRPEGKLIVRDNAETINELQGMVKSL 774
Query: 379 QWEIRMSFNQDKEGILCAQKTLWRP 305
QWE+RM++ + EG+LC QK++WRP
Sbjct: 775 QWEVRMTYTKGNEGLLCVQKSMWRP 799
Score = 35.0 bits (79), Expect = 0.62
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 15/79 (18%)
Frame = -1
Query: 559 YP-RSYDLLHVDHLFSRLKNRCKQPVSI-----VVEMDRILRPGGWTI---------IRD 425
YP R +D++H RC+ P I ++E++R+LRPGG+ + + +
Sbjct: 463 YPSRVFDVIHCA--------RCRVPWHIEGGMLLLELNRLLRPGGYFVWSATPVYQKLPE 514
Query: 424 KVEILNALEEILRSMQWEI 368
VEI NA+ + ++M W++
Sbjct: 515 DVEIWNAMSSLTKAMCWKM 533
>gb|AAM78114.1| AT5g64030/MBM17_13 [Arabidopsis thaliana]
gi|27764914|gb|AAO23578.1| At5g64030/MBM17_13
[Arabidopsis thaliana]
Length = 829
Score = 106 bits (265), Expect = 2e-22
Identities = 44/85 (51%), Positives = 67/85 (78%)
Frame = -1
Query: 559 YPRSYDLLHVDHLFSRLKNRCKQPVSIVVEMDRILRPGGWTIIRDKVEILNALEEILRSM 380
YPRSYDLLH DHLFS+LK RC +++ E+DR+LRP G I+RD E + +E ++++M
Sbjct: 735 YPRSYDLLHADHLFSKLKQRCNL-TAVIAEVDRVLRPEGKLIVRDDAETIQQVEGMVKAM 793
Query: 379 QWEIRMSFNQDKEGILCAQKTLWRP 305
+WE+RM+++++KEG+L QK++WRP
Sbjct: 794 KWEVRMTYSKEKEGLLSVQKSIWRP 818
Score = 37.4 bits (85), Expect = 0.13
Identities = 25/83 (30%), Positives = 44/83 (52%), Gaps = 14/83 (16%)
Frame = -1
Query: 553 RSYDLLHVDHLFSRLKNRCKQPVSI-----VVEMDRILRPGGWTI---------IRDKVE 416
R +D++H RC+ P I ++E++R+LRPGG+ + + VE
Sbjct: 485 RVFDIVHCA--------RCRVPWHIEGGKLLLELNRVLRPGGFFVWSATPVYQKKTEDVE 536
Query: 415 ILNALEEILRSMQWEIRMSFNQD 347
I A+ E+++ M WE+ +S N+D
Sbjct: 537 IWKAMSELIKKMCWEL-VSINKD 558
>ref|NP_201208.1| ankyrin-like protein; protein id: At5g64030.1 [Arabidopsis
thaliana]
Length = 786
Score = 106 bits (265), Expect = 2e-22
Identities = 44/85 (51%), Positives = 67/85 (78%)
Frame = -1
Query: 559 YPRSYDLLHVDHLFSRLKNRCKQPVSIVVEMDRILRPGGWTIIRDKVEILNALEEILRSM 380
YPRSYDLLH DHLFS+LK RC +++ E+DR+LRP G I+RD E + +E ++++M
Sbjct: 692 YPRSYDLLHADHLFSKLKQRCNL-TAVIAEVDRVLRPEGKLIVRDDAETIQQVEGMVKAM 750
Query: 379 QWEIRMSFNQDKEGILCAQKTLWRP 305
+WE+RM+++++KEG+L QK++WRP
Sbjct: 751 KWEVRMTYSKEKEGLLSVQKSIWRP 775
Score = 37.4 bits (85), Expect = 0.13
Identities = 25/83 (30%), Positives = 44/83 (52%), Gaps = 14/83 (16%)
Frame = -1
Query: 553 RSYDLLHVDHLFSRLKNRCKQPVSI-----VVEMDRILRPGGWTI---------IRDKVE 416
R +D++H RC+ P I ++E++R+LRPGG+ + + VE
Sbjct: 442 RVFDIVHCA--------RCRVPWHIEGGKLLLELNRVLRPGGFFVWSATPVYQKKTEDVE 493
Query: 415 ILNALEEILRSMQWEIRMSFNQD 347
I A+ E+++ M WE+ +S N+D
Sbjct: 494 IWKAMSELIKKMCWEL-VSINKD 515
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 478,997,003
Number of Sequences: 1393205
Number of extensions: 10223311
Number of successful extensions: 20361
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 19589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20301
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 19808345223
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
